RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 KCNQ2O43526 872 aa11.53□□□□□ -0.56
GAPVD1-219ENST00000495955 CHAF1AQ13111 956 aaPredicted RBP11.53□□□□□ -0.56
GAPVD1-219ENST00000495955 BARGINQ6ZT62 677 aa11.53□□□□□ -0.56
GAPVD1-219ENST00000495955 CNTROBQ8N137 903 aa11.53□□□□□ -0.56
GAPVD1-219ENST00000495955 PDZRN3Q9UPQ7 1066 aa11.52□□□□□ -0.56
GAPVD1-219ENST00000495955 ANKRD18AQ8IVF6 992 aa11.52□□□□□ -0.57
GAPVD1-219ENST00000495955 CPDO75976 1380 aa11.52□□□□□ -0.57
GAPVD1-219ENST00000495955 ZNF142P52746 1687 aaPredicted RBP11.52□□□□□ -0.57
GAPVD1-219ENST00000495955 MEIS3Q99687 375 aa11.52□□□□□ -0.57
GAPVD1-219ENST00000495955 RAD21O60216 631 aa11.51□□□□□ -0.57
GAPVD1-219ENST00000495955 CCDC24Q8N4L8 307 aa11.51□□□□□ -0.57
GAPVD1-219ENST00000495955 PARP10Q53GL7 1025 aa11.51□□□□□ -0.57
GAPVD1-219ENST00000495955 LMBR1LQ6UX01 489 aa11.51□□□□□ -0.57
GAPVD1-219ENST00000495955 FAM89AQ96GI7 184 aa11.51□□□□□ -0.57
GAPVD1-219ENST00000495955 MAP4K4O95819 1239 aaPredicted RBP11.51□□□□□ -0.57
GAPVD1-219ENST00000495955 NUTM1Q86Y26 1132 aa11.51□□□□□ -0.57
GAPVD1-219ENST00000495955 HSCBQ8IWL3 235 aa11.51□□□□□ -0.57
GAPVD1-219ENST00000495955 KIF1AQ12756 1690 aa11.51□□□□□ -0.57
GAPVD1-219ENST00000495955 NCBP3Q53F19 620 aaKnown RBP11.51□□□□□ -0.57
GAPVD1-219ENST00000495955 METTL22Q9BUU2 404 aaPredicted RBP11.51□□□□□ -0.57
GAPVD1-219ENST00000495955 IFT172Q9UG01 1749 aa11.51□□□□□ -0.57
GAPVD1-219ENST00000495955 PRAMEF22A3QJZ6 481 aa11.5□□□□□ -0.57
GAPVD1-219ENST00000495955 SLC5A1P13866 664 aa11.5□□□□□ -0.57
GAPVD1-219ENST00000495955 KIF1BPQ96EK5 621 aa11.5□□□□□ -0.57
GAPVD1-219ENST00000495955 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.5□□□□□ -0.57
GAPVD1-219ENST00000495955 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.5□□□□□ -0.571e-6■■■■□ 20.7
GAPVD1-219ENST00000495955 ZBTB1Q9Y2K1 713 aa11.5□□□□□ -0.57
GAPVD1-219ENST00000495955 EN1Q05925 392 aaPredicted RBP11.5□□□□□ -0.57
GAPVD1-219ENST00000495955 RAI14Q9P0K7 980 aa11.5□□□□□ -0.57
GAPVD1-219ENST00000495955 RAB11FIP3O75154 756 aa11.49□□□□□ -0.57
GAPVD1-219ENST00000495955 HCLS1P14317 486 aaPredicted RBP11.49□□□□□ -0.57
GAPVD1-219ENST00000495955 USPL1Q5W0Q7 1092 aa11.49□□□□□ -0.57
GAPVD1-219ENST00000495955 NOL8Q76FK4 1167 aaKnown RBP11.49□□□□□ -0.57
GAPVD1-219ENST00000495955 MARCH10Q8NA82 808 aaPredicted RBP11.49□□□□□ -0.57
GAPVD1-219ENST00000495955 ANO2Q9NQ90 1003 aa11.49□□□□□ -0.57
GAPVD1-219ENST00000495955 ATG3Q9NT62 314 aa11.49□□□□□ -0.57
GAPVD1-219ENST00000495955 CD163L1Q9NR16 1453 aa11.49□□□□□ -0.57
GAPVD1-219ENST00000495955 SMARCA5O60264 1052 aaPredicted RBP11.49□□□□□ -0.57
GAPVD1-219ENST00000495955 ABCF2Q9UG63 623 aa11.49□□□□□ -0.57
GAPVD1-219ENST00000495955 TNNQ9UQP3 1299 aa11.49□□□□□ -0.57
GAPVD1-219ENST00000495955 LRP2BPQ9P2M1 347 aa11.49□□□□□ -0.57
GAPVD1-219ENST00000495955 TPRNQ4KMQ1 711 aa11.49□□□□□ -0.57
GAPVD1-219ENST00000495955 TTLL7Q6ZT98 887 aa11.49□□□□□ -0.57
GAPVD1-219ENST00000495955 CHD1LQ86WJ1 897 aa11.49□□□□□ -0.57
GAPVD1-219ENST00000495955 SH3TC1Q8TE82 1336 aa11.49□□□□□ -0.57
GAPVD1-219ENST00000495955 RBM17Q96I25 401 aaKnown RBP11.48□□□□□ -0.57
GAPVD1-219ENST00000495955 CCDC8Q9H0W5 538 aaPredicted RBP11.48□□□□□ -0.57
GAPVD1-219ENST00000495955 NCAPD2Q15021 1401 aa11.48□□□□□ -0.57
GAPVD1-219ENST00000495955 CCDC191Q8NCU4 936 aa11.48□□□□□ -0.57
GAPVD1-219ENST00000495955 HEG1Q9ULI3 1381 aa11.48□□□□□ -0.57
GAPVD1-219ENST00000495955 INTS3Q68E01 1043 aaKnown RBP11.48□□□□□ -0.57
GAPVD1-219ENST00000495955 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.47□□□□□ -0.57
GAPVD1-219ENST00000495955 SPRYD3Q8NCJ5 442 aa11.47□□□□□ -0.57
GAPVD1-219ENST00000495955 REC8O95072 547 aa11.47□□□□□ -0.57
GAPVD1-219ENST00000495955 IDH1O75874 414 aaKnown RBP11.47□□□□□ -0.57
GAPVD1-219ENST00000495955 NRXN3Q9Y4C0 1643 aa11.47□□□□□ -0.57
GAPVD1-219ENST00000495955 IL6STP40189 918 aaPredicted RBP11.46□□□□□ -0.57
GAPVD1-219ENST00000495955 H0YIN7 160 aa11.46□□□□□ -0.57
GAPVD1-219ENST00000495955 ZKSCAN1P17029 563 aaPredicted RBP11.46□□□□□ -0.57
GAPVD1-219ENST00000495955 TRDNQ13061 729 aa11.46□□□□□ -0.57
GAPVD1-219ENST00000495955 PROSER3Q2NL68 480 aa11.46□□□□□ -0.57
GAPVD1-219ENST00000495955 NLGN1Q8N2Q7 840 aa11.46□□□□□ -0.57
GAPVD1-219ENST00000495955 USP32Q8NFA0 1604 aa11.46□□□□□ -0.58
GAPVD1-219ENST00000495955 ERBB4Q15303 1308 aa11.46□□□□□ -0.58
GAPVD1-219ENST00000495955 TCIRG1Q13488 830 aa11.46□□□□□ -0.58
GAPVD1-219ENST00000495955 GNL2Q13823 731 aaKnown RBP11.46□□□□□ -0.58
GAPVD1-219ENST00000495955 TXNRD1Q16881 649 aa11.45□□□□□ -0.58
GAPVD1-219ENST00000495955 BICC1Q9H694 974 aaKnown RBP11.45□□□□□ -0.58
GAPVD1-219ENST00000495955 NSFL1CQ9UNZ2 370 aaKnown RBP11.45□□□□□ -0.58
GAPVD1-219ENST00000495955 ZSCAN25Q6NSZ9 544 aa11.45□□□□□ -0.58
GAPVD1-219ENST00000495955 KNDC1Q76NI1 1749 aa11.45□□□□□ -0.58
GAPVD1-219ENST00000495955 CDC45O75419 566 aa11.45□□□□□ -0.58
GAPVD1-219ENST00000495955 RNF20Q5VTR2 975 aa11.45□□□□□ -0.58
GAPVD1-219ENST00000495955 MAP3K15Q6ZN16 1313 aa11.45□□□□□ -0.58
GAPVD1-219ENST00000495955 HIP1O00291 1037 aa11.45□□□□□ -0.58
GAPVD1-219ENST00000495955 VSIG10Q8N0Z9 540 aa11.45□□□□□ -0.58
GAPVD1-219ENST00000495955 ATF5Q9Y2D1 282 aaPredicted RBP11.45□□□□□ -0.58
GAPVD1-219ENST00000495955 ADGRB2O60241 1585 aa11.44□□□□□ -0.58
GAPVD1-219ENST00000495955 PDE8AO60658 829 aa11.44□□□□□ -0.58
GAPVD1-219ENST00000495955 BOLA2Q9H3K6 86 aa11.44□□□□□ -0.58
GAPVD1-219ENST00000495955 RLBP1P12271 317 aa11.44□□□□□ -0.58
GAPVD1-219ENST00000495955 SLC27A3Q5K4L6 730 aa11.44□□□□□ -0.58
GAPVD1-219ENST00000495955 PA2G4Q9UQ80 394 aaKnown RBP11.44□□□□□ -0.58
GAPVD1-219ENST00000495955 NCLP19338 710 aaKnown RBP11.44□□□□□ -0.58
GAPVD1-219ENST00000495955 HELBQ8NG08 1087 aaPredicted RBP11.44□□□□□ -0.58
GAPVD1-219ENST00000495955 FMN2Q9NZ56 1722 aa11.43□□□□□ -0.58
GAPVD1-219ENST00000495955 MX1P20591 662 aa11.43□□□□□ -0.58
GAPVD1-219ENST00000495955 GCKRQ14397 625 aa11.43□□□□□ -0.58
GAPVD1-219ENST00000495955 DZIP1Q86YF9 867 aaKnown RBP11.43□□□□□ -0.58
GAPVD1-219ENST00000495955 ZSCAN29Q8IWY8 852 aaPredicted RBP11.43□□□□□ -0.58
GAPVD1-219ENST00000495955 FNBP4Q8N3X1 1017 aaPredicted RBP11.43□□□□□ -0.58
GAPVD1-219ENST00000495955 SRP68Q9UHB9 627 aaKnown RBP11.43□□□□□ -0.58
GAPVD1-219ENST00000495955 XRN1Q8IZH2 1706 aaKnown RBP11.43□□□□□ -0.58
GAPVD1-219ENST00000495955 IQSEC2Q5JU85 1478 aa11.43□□□□□ -0.58
GAPVD1-219ENST00000495955 ITGA6P23229 1130 aa11.43□□□□□ -0.58
GAPVD1-219ENST00000495955 SYNE3Q6ZMZ3 975 aa11.43□□□□□ -0.58
GAPVD1-219ENST00000495955 COL5A2P05997 1499 aaPredicted RBP11.43□□□□□ -0.58
GAPVD1-219ENST00000495955 CHD2O14647 1828 aaKnown RBP11.43□□□□□ -0.58
GAPVD1-219ENST00000495955 KIF20BQ96Q89 1820 aa11.43□□□□□ -0.58
GAPVD1-219ENST00000495955 ATP8B2P98198 1209 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms