RNA–Protein interactions for RNA: ENST00000494467.1

ABCA1-204, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 3

Gene ABCA1, Length 807 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-204ENST00000494467 DDX19BQ9UMR2 479 aa11.73□□□□□ -0.53
ABCA1-204ENST00000494467 ZBTB1Q9Y2K1 713 aa11.73□□□□□ -0.53
ABCA1-204ENST00000494467 COL15A1P39059 1388 aa11.72□□□□□ -0.53
ABCA1-204ENST00000494467 MAP3K15Q6ZN16 1313 aa11.72□□□□□ -0.53
ABCA1-204ENST00000494467 A0A087WZG4 1122 aa11.72□□□□□ -0.53
ABCA1-204ENST00000494467 PI4KAP2A4QPH2 592 aa11.72□□□□□ -0.53
ABCA1-204ENST00000494467 APBA3O96018 575 aa11.72□□□□□ -0.53
ABCA1-204ENST00000494467 ANXA1P04083 346 aa11.72□□□□□ -0.53
ABCA1-204ENST00000494467 CANXP27824 592 aaKnown RBP11.72□□□□□ -0.53
ABCA1-204ENST00000494467 BEND3Q5T5X7 828 aa11.72□□□□□ -0.53
ABCA1-204ENST00000494467 PI4KAP1Q8N8J0 262 aa11.72□□□□□ -0.53
ABCA1-204ENST00000494467 METTL22Q9BUU2 404 aaPredicted RBP11.72□□□□□ -0.53
ABCA1-204ENST00000494467 TNNQ9UQP3 1299 aa11.72□□□□□ -0.53
ABCA1-204ENST00000494467 COL24A1Q17RW2 1714 aa11.72□□□□□ -0.53
ABCA1-204ENST00000494467 UTYO14607 1347 aa11.71□□□□□ -0.53
ABCA1-204ENST00000494467 ZBTB7BO15156 539 aaPredicted RBP11.71□□□□□ -0.53
ABCA1-204ENST00000494467 MYL6BP14649 208 aa11.71□□□□□ -0.53
ABCA1-204ENST00000494467 CLEC4GQ6UXB4 293 aa11.71□□□□□ -0.53
ABCA1-204ENST00000494467 FTSJ3Q8IY81 847 aaKnown RBP11.71□□□□□ -0.53
ABCA1-204ENST00000494467 TMEM57Q8N5G2 664 aa11.71□□□□□ -0.53
ABCA1-204ENST00000494467 LINS1Q8NG48 757 aa11.71□□□□□ -0.53
ABCA1-204ENST00000494467 PANK1Q8TE04 598 aa11.71□□□□□ -0.53
ABCA1-204ENST00000494467 SSFA2P28290 1259 aa11.7□□□□□ -0.54
ABCA1-204ENST00000494467 GIGYF2Q6Y7W6 1299 aaKnown RBP11.7□□□□□ -0.54
ABCA1-204ENST00000494467 AKT1S1Q96B36 256 aa11.7□□□□□ -0.54
ABCA1-204ENST00000494467 CRBNQ96SW2 442 aa11.7□□□□□ -0.54
ABCA1-204ENST00000494467 ZBTB40Q9NUA8 1239 aa11.7□□□□□ -0.54
ABCA1-204ENST00000494467 MAP3K2Q9Y2U5 619 aa11.7□□□□□ -0.54
ABCA1-204ENST00000494467 MYH3P11055 1940 aa11.69□□□□□ -0.54
ABCA1-204ENST00000494467 F6X3S4 739 aa11.69□□□□□ -0.54
ABCA1-204ENST00000494467 HSP90AB3PQ58FF7 597 aa11.69□□□□□ -0.54
ABCA1-204ENST00000494467 TTLL7Q6ZT98 887 aa11.69□□□□□ -0.54
ABCA1-204ENST00000494467 CLUAP1Q96AJ1 413 aa11.69□□□□□ -0.54
ABCA1-204ENST00000494467 ISCA1Q9BUE6 129 aa11.69□□□□□ -0.54
ABCA1-204ENST00000494467 COG6Q9Y2V7 657 aa11.69□□□□□ -0.54
ABCA1-204ENST00000494467 LAMB2P55268 1798 aa11.69□□□□□ -0.54
ABCA1-204ENST00000494467 CAMTA2O94983 1202 aa11.68□□□□□ -0.54
ABCA1-204ENST00000494467 IGKV5-2P06315 115 aa11.68□□□□□ -0.54
ABCA1-204ENST00000494467 BAG6P46379 1132 aa11.68□□□□□ -0.54
ABCA1-204ENST00000494467 TCIRG1Q13488 830 aa11.68□□□□□ -0.54
ABCA1-204ENST00000494467 FKBP8Q14318 412 aa11.68□□□□□ -0.54
ABCA1-204ENST00000494467 KIF6Q6ZMV9 814 aa11.68□□□□□ -0.54
ABCA1-204ENST00000494467 RIC3Q7Z5B4 369 aa11.68□□□□□ -0.54
ABCA1-204ENST00000494467 DZIP3Q86Y13 1208 aaKnown RBP11.68□□□□□ -0.54
ABCA1-204ENST00000494467 CCDC191Q8NCU4 936 aa11.68□□□□□ -0.54
ABCA1-204ENST00000494467 SRCIN1Q9C0H9 1055 aa11.68□□□□□ -0.54
ABCA1-204ENST00000494467 NARFQ9UHQ1 456 aa11.68□□□□□ -0.54
ABCA1-204ENST00000494467 RTCBQ9Y3I0 505 aaKnown RBP11.68□□□□□ -0.54
ABCA1-204ENST00000494467 GNAI3P08754 354 aa11.67□□□□□ -0.54
ABCA1-204ENST00000494467 PIP4K2AP48426 406 aaPredicted RBP11.67□□□□□ -0.54
ABCA1-204ENST00000494467 NEXNQ0ZGT2 675 aa11.67□□□□□ -0.54
ABCA1-204ENST00000494467 ZNF34Q8IZ26 560 aa11.67□□□□□ -0.54
ABCA1-204ENST00000494467 FLAD1Q8NFF5 587 aa11.67□□□□□ -0.54
ABCA1-204ENST00000494467 EXOC6Q8TAG9 804 aa11.67□□□□□ -0.54
ABCA1-204ENST00000494467 USP44Q9H0E7 712 aa11.67□□□□□ -0.54
ABCA1-204ENST00000494467 HDAC5Q9UQL6 1122 aa11.67□□□□□ -0.54
ABCA1-204ENST00000494467 USP42Q9H9J4 1324 aaKnown RBP11.66□□□□□ -0.54
ABCA1-204ENST00000494467 NEURL1BA8MQ27 555 aa11.66□□□□□ -0.54
ABCA1-204ENST00000494467 KCNQ4P56696 695 aa11.66□□□□□ -0.54
ABCA1-204ENST00000494467 AIMP1Q12904 312 aaKnown RBP11.66□□□□□ -0.54
ABCA1-204ENST00000494467 SF3B2Q13435 895 aaKnown RBP11.66□□□□□ -0.54
ABCA1-204ENST00000494467 ITPRIPQ8IWB1 547 aa11.66□□□□□ -0.54
ABCA1-204ENST00000494467 AK7Q96M32 723 aa11.66□□□□□ -0.54
ABCA1-204ENST00000494467 PPP4R2Q9NY27 417 aa11.66□□□□□ -0.54
ABCA1-204ENST00000494467 NRXN2Q9P2S2 1712 aa11.66□□□□□ -0.54
ABCA1-204ENST00000494467 H7C1W4 665 aa11.65□□□□□ -0.54
ABCA1-204ENST00000494467 GNPATO15228 680 aa11.65□□□□□ -0.54
ABCA1-204ENST00000494467 GCKRQ14397 625 aa11.65□□□□□ -0.54
ABCA1-204ENST00000494467 NPM2Q86SE8 214 aaKnown RBP11.65□□□□□ -0.54
ABCA1-204ENST00000494467 ARHGEF1Q92888 912 aaKnown RBP11.65□□□□□ -0.54
ABCA1-204ENST00000494467 GTF3C3Q9Y5Q9 886 aa11.65□□□□□ -0.54
ABCA1-204ENST00000494467 CASZ1Q86V15 1759 aa11.64□□□□□ -0.55
ABCA1-204ENST00000494467 GRM8O00222 908 aa11.64□□□□□ -0.55
ABCA1-204ENST00000494467 CASP7P55210 303 aa11.64□□□□□ -0.55
ABCA1-204ENST00000494467 EZH2Q15910 746 aaKnown RBP11.64□□□□□ -0.55
ABCA1-204ENST00000494467 PARP10Q53GL7 1025 aa11.64□□□□□ -0.55
ABCA1-204ENST00000494467 TRAPPC3LQ5T215 181 aa11.64□□□□□ -0.55
ABCA1-204ENST00000494467 SLC4A10Q6U841 1118 aa11.64□□□□□ -0.55
ABCA1-204ENST00000494467 AMIGO3Q86WK7 504 aa11.64□□□□□ -0.55
ABCA1-204ENST00000494467 UPF1Q92900 1129 aaKnown RBP eCLIP11.64□□□□□ -0.55
ABCA1-204ENST00000494467 BCL2L12Q9HB09 334 aa11.64□□□□□ -0.55
ABCA1-204ENST00000494467 ZNF652Q9Y2D9 606 aa11.64□□□□□ -0.55
ABCA1-204ENST00000494467 DDX60Q8IY21 1712 aaKnown RBP11.63□□□□□ -0.55
ABCA1-204ENST00000494467 RIC1Q4ADV7 1423 aa11.63□□□□□ -0.55
ABCA1-204ENST00000494467 IRX6P78412 446 aaPredicted RBP11.63□□□□□ -0.55
ABCA1-204ENST00000494467 EN1Q05925 392 aaPredicted RBP11.63□□□□□ -0.55
ABCA1-204ENST00000494467 MTX1Q13505 466 aa11.63□□□□□ -0.55
ABCA1-204ENST00000494467 HDAC1Q13547 482 aaPredicted RBP11.63□□□□□ -0.55
ABCA1-204ENST00000494467 HLFQ16534 295 aa11.63□□□□□ -0.55
ABCA1-204ENST00000494467 ZNF827Q17R98 1081 aa11.63□□□□□ -0.55
ABCA1-204ENST00000494467 RPAP2Q8IXW5 612 aaPredicted RBP11.63□□□□□ -0.55
ABCA1-204ENST00000494467 MEIS3Q99687 375 aa11.63□□□□□ -0.55
ABCA1-204ENST00000494467 MYD88Q99836 296 aa11.63□□□□□ -0.55
ABCA1-204ENST00000494467 ZBTB3Q9H5J0 574 aa11.63□□□□□ -0.55
ABCA1-204ENST00000494467 CWC25Q9NXE8 425 aaPredicted RBP11.63□□□□□ -0.55
ABCA1-204ENST00000494467 TBC1D2BQ9UPU7 963 aa11.63□□□□□ -0.55
ABCA1-204ENST00000494467 CDHR2Q9BYE9 1310 aa11.62□□□□□ -0.55
ABCA1-204ENST00000494467 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.62□□□□□ -0.55
ABCA1-204ENST00000494467 PCCAP05165 728 aaPredicted RBP11.62□□□□□ -0.55
ABCA1-204ENST00000494467 SLC15A2Q16348 729 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms