RNA–Protein interactions for RNA: ENST00000494422.1

BRD9-211, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-211ENST00000494422 FANCIQ9NVI1 1328 aa8.24□□□□□ -1.09
BRD9-211ENST00000494422 TAF1LQ8IZX4 1826 aa8.24□□□□□ -1.09
BRD9-211ENST00000494422 C4BP0C0L5 1744 aa8.23□□□□□ -1.09
BRD9-211ENST00000494422 COL5A3P25940 1745 aaPredicted RBP8.23□□□□□ -1.09
BRD9-211ENST00000494422 QSER1Q2KHR3 1735 aa8.23□□□□□ -1.09
BRD9-211ENST00000494422 NUP188Q5SRE5 1749 aa8.23□□□□□ -1.09
BRD9-211ENST00000494422 LAMB4A4D0S4 1761 aa8.23□□□□□ -1.09
BRD9-211ENST00000494422 RPS6KA4O75676 772 aa8.23□□□□□ -1.09
BRD9-211ENST00000494422 IL6STP40189 918 aaPredicted RBP8.23□□□□□ -1.09
BRD9-211ENST00000494422 CCDC30Q5VVM6 783 aa8.23□□□□□ -1.09
BRD9-211ENST00000494422 SLC16A10Q8TF71 515 aa8.23□□□□□ -1.09
BRD9-211ENST00000494422 SLC4A9Q96Q91 983 aa8.23□□□□□ -1.09
BRD9-211ENST00000494422 BMP2KQ9NSY1 1161 aaPredicted RBP8.23□□□□□ -1.09
BRD9-211ENST00000494422 CCDC87Q9NVE4 849 aa8.23□□□□□ -1.09
BRD9-211ENST00000494422 MIS18AQ9NYP9 233 aa8.23□□□□□ -1.09
BRD9-211ENST00000494422 RTCBQ9Y3I0 505 aaKnown RBP8.23□□□□□ -1.09
BRD9-211ENST00000494422 TJP1Q07157 1748 aa8.23□□□□□ -1.09
BRD9-211ENST00000494422 KCNQ3O43525 872 aa8.22□□□□□ -1.09
BRD9-211ENST00000494422 CRKLP46109 303 aaKnown RBP8.22□□□□□ -1.09
BRD9-211ENST00000494422 ITPK1Q13572 414 aa8.22□□□□□ -1.09
BRD9-211ENST00000494422 TWISTNBQ3B726 338 aaPredicted RBP8.22□□□□□ -1.09
BRD9-211ENST00000494422 DUSP27Q5VZP5 1158 aa8.22□□□□□ -1.09
BRD9-211ENST00000494422 DNAJC10Q8IXB1 793 aa8.22□□□□□ -1.09
BRD9-211ENST00000494422 LINC00116Q8NCU8 138 aa8.22□□□□□ -1.09
BRD9-211ENST00000494422 TFCP2L1Q9NZI6 479 aa8.22□□□□□ -1.09
BRD9-211ENST00000494422 DBF4Q9UBU7 674 aaPredicted RBP8.22□□□□□ -1.09
BRD9-211ENST00000494422 TRAPPC3LQ5T215 181 aa8.21□□□□□ -1.1
BRD9-211ENST00000494422 HDGFL1Q5TGJ6 251 aa8.21□□□□□ -1.1
BRD9-211ENST00000494422 FAM163AQ96GL9 167 aaPredicted RBP8.21□□□□□ -1.1
BRD9-211ENST00000494422 STK31Q9BXU1 1019 aa8.21□□□□□ -1.1
BRD9-211ENST00000494422 HYPKQ9NX55 129 aa8.21□□□□□ -1.1
BRD9-211ENST00000494422 USP16Q9Y5T5 823 aa8.21□□□□□ -1.1
BRD9-211ENST00000494422 GNPATO15228 680 aa8.2□□□□□ -1.1
BRD9-211ENST00000494422 EIF5P55010 431 aaKnown RBP8.2□□□□□ -1.1
BRD9-211ENST00000494422 ALDH1L2Q3SY69 923 aa8.2□□□□□ -1.1
BRD9-211ENST00000494422 INTS5Q6P9B9 1019 aaKnown RBP8.2□□□□□ -1.1
BRD9-211ENST00000494422 TSR2Q969E8 191 aaKnown RBP8.2□□□□□ -1.1
BRD9-211ENST00000494422 DDX21Q9NR30 783 aaKnown RBP eCLIP8.2□□□□□ -1.1
BRD9-211ENST00000494422 CACNA1FO60840 1977 aa8.2□□□□□ -1.1
BRD9-211ENST00000494422 ERVV-1B6SEH8 477 aa8.19□□□□□ -1.1
BRD9-211ENST00000494422 VAMP4O75379 141 aa8.19□□□□□ -1.1
BRD9-211ENST00000494422 DDX58O95786 925 aaKnown RBP8.19□□□□□ -1.1
BRD9-211ENST00000494422 EIF2S2P20042 333 aaKnown RBP8.19□□□□□ -1.1
BRD9-211ENST00000494422 RFC4P35249 363 aa8.19□□□□□ -1.1
BRD9-211ENST00000494422 BRPF1P55201 1214 aaPredicted RBP8.19□□□□□ -1.1
BRD9-211ENST00000494422 EXOSC9Q06265 439 aaKnown RBP8.19□□□□□ -1.1
BRD9-211ENST00000494422 CLEC4GQ6UXB4 293 aa8.19□□□□□ -1.1
BRD9-211ENST00000494422 C8orf58Q8NAV2 365 aa8.19□□□□□ -1.1
BRD9-211ENST00000494422 ZNF652Q9Y2D9 606 aa8.19□□□□□ -1.1
BRD9-211ENST00000494422 ZBTB1Q9Y2K1 713 aa8.19□□□□□ -1.1
BRD9-211ENST00000494422 COL15A1P39059 1388 aa8.19□□□□□ -1.1
BRD9-211ENST00000494422 UBR3Q6ZT12 1888 aa8.19□□□□□ -1.1
BRD9-211ENST00000494422 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.18□□□□□ -1.1
BRD9-211ENST00000494422 MAP3K13O43283 966 aa8.18□□□□□ -1.1
BRD9-211ENST00000494422 ZPR1O75312 459 aa8.18□□□□□ -1.1
BRD9-211ENST00000494422 ZNF827Q17R98 1081 aa8.18□□□□□ -1.1
BRD9-211ENST00000494422 HSP90AB3PQ58FF7 597 aa8.18□□□□□ -1.1
BRD9-211ENST00000494422 NLGN1Q8N2Q7 840 aa8.18□□□□□ -1.1
BRD9-211ENST00000494422 SCUBE2Q9NQ36 999 aa8.18□□□□□ -1.1
BRD9-211ENST00000494422 NARFQ9UHQ1 456 aa8.18□□□□□ -1.1
BRD9-211ENST00000494422 PRAMEF22A3QJZ6 481 aa8.17□□□□□ -1.1
BRD9-211ENST00000494422 A1BGP04217 495 aa8.17□□□□□ -1.1
BRD9-211ENST00000494422 CANXP27824 592 aaKnown RBP8.17□□□□□ -1.1
BRD9-211ENST00000494422 KCNQ4P56696 695 aa8.17□□□□□ -1.1
BRD9-211ENST00000494422 KIF6Q6ZMV9 814 aa8.17□□□□□ -1.1
BRD9-211ENST00000494422 DZIP3Q86Y13 1208 aaKnown RBP8.17□□□□□ -1.1
BRD9-211ENST00000494422 KLHL34Q8N239 644 aa8.17□□□□□ -1.1
BRD9-211ENST00000494422 TSPYL6Q8N831 410 aa8.17□□□□□ -1.1
BRD9-211ENST00000494422 CDCA7LQ96GN5 454 aa8.17□□□□□ -1.1
BRD9-211ENST00000494422 MTFR1LQ9H019 292 aa8.17□□□□□ -1.1
BRD9-211ENST00000494422 ANO8Q9HCE9 1232 aaPredicted RBP8.17□□□□□ -1.1
BRD9-211ENST00000494422 COLQQ9Y215 455 aaPredicted RBP8.17□□□□□ -1.1
BRD9-211ENST00000494422 PNPLA7Q6ZV29 1317 aa8.17□□□□□ -1.1
BRD9-211ENST00000494422 MYH14Q7Z406 1995 aaKnown RBP8.17□□□□□ -1.1
BRD9-211ENST00000494422 NBPF26B4DH59 902 aa8.16□□□□□ -1.1
BRD9-211ENST00000494422 ELL2O00472 640 aaPredicted RBP8.16□□□□□ -1.1
BRD9-211ENST00000494422 PTPRCP08575 1304 aa8.16□□□□□ -1.1
BRD9-211ENST00000494422 TIE1P35590 1138 aa8.16□□□□□ -1.1
BRD9-211ENST00000494422 PDIA6Q15084 440 aa8.16□□□□□ -1.1
BRD9-211ENST00000494422 KRT24Q2M2I5 525 aa8.16□□□□□ -1.1
BRD9-211ENST00000494422 NBPF10Q6P3W6 841 aaKnown RBP8.16□□□□□ -1.1
BRD9-211ENST00000494422 MAP3K15Q6ZN16 1313 aa8.16□□□□□ -1.1
BRD9-211ENST00000494422 RASEFQ8IZ41 740 aa8.16□□□□□ -1.1
BRD9-211ENST00000494422 NBPF15Q8N660 670 aa8.16□□□□□ -1.1
BRD9-211ENST00000494422 ARHGEF1Q92888 912 aaKnown RBP8.16□□□□□ -1.1
BRD9-211ENST00000494422 KIF16BQ96L93 1317 aa8.16□□□□□ -1.1
BRD9-211ENST00000494422 USP42Q9H9J4 1324 aaKnown RBP8.16□□□□□ -1.1
BRD9-211ENST00000494422 CHPF2Q9P2E5 772 aa8.16□□□□□ -1.1
BRD9-211ENST00000494422 IBTKQ9P2D0 1353 aaPredicted RBP8.15□□□□□ -1.1
BRD9-211ENST00000494422 SENP3-EIF4A1A0A087X0R7 540 aa8.15□□□□□ -1.1
BRD9-211ENST00000494422 IPO8O15397 1037 aaKnown RBP8.15□□□□□ -1.1
BRD9-211ENST00000494422 R3HDM1Q15032 1099 aaKnown RBP8.15□□□□□ -1.1
BRD9-211ENST00000494422 ANKRD13DQ6ZTN6 518 aa8.15□□□□□ -1.1
BRD9-211ENST00000494422 LRP10Q7Z4F1 713 aa8.15□□□□□ -1.1
BRD9-211ENST00000494422 COL23A1Q86Y22 540 aaPredicted RBP8.15□□□□□ -1.1
BRD9-211ENST00000494422 PLBD2Q8NHP8 589 aa8.15□□□□□ -1.1
BRD9-211ENST00000494422 ARHGAP45Q92619 1136 aa8.15□□□□□ -1.1
BRD9-211ENST00000494422 RNF123Q5XPI4 1314 aa8.14□□□□□ -1.11
BRD9-211ENST00000494422 PHF14O94880 888 aa8.14□□□□□ -1.11
BRD9-211ENST00000494422 MS4A1P11836 297 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms