RNA–Protein interactions for RNA: ENST00000493521.5

SOX2-OT-215, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 1,239 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-215ENST00000493521 WDR90Q96KV7 1748 aa13.54□□□□□ -0.24
SOX2-OT-215ENST00000493521 FAM177BA6PVY3 158 aa13.54□□□□□ -0.24
SOX2-OT-215ENST00000493521 POTECB2RU33 542 aa13.54□□□□□ -0.24
SOX2-OT-215ENST00000493521 A0A087WZG4 1122 aa13.53□□□□□ -0.24
SOX2-OT-215ENST00000493521 H0YIN7 160 aa13.53□□□□□ -0.24
SOX2-OT-215ENST00000493521 RALBP1Q15311 655 aa13.53□□□□□ -0.24
SOX2-OT-215ENST00000493521 NUDCQ9Y266 331 aa13.53□□□□□ -0.24
SOX2-OT-215ENST00000493521 LAMB4A4D0S4 1761 aa13.53□□□□□ -0.24
SOX2-OT-215ENST00000493521 CCDC184Q52MB2 194 aa13.52□□□□□ -0.25
SOX2-OT-215ENST00000493521 NGEFQ8N5V2 710 aa13.52□□□□□ -0.25
SOX2-OT-215ENST00000493521 BRIP1Q9BX63 1249 aa13.52□□□□□ -0.25
SOX2-OT-215ENST00000493521 TEX13AQ9BXU3 409 aaPredicted RBP13.52□□□□□ -0.25
SOX2-OT-215ENST00000493521 PCNTO95613 3336 aa13.52□□□□□ -0.25
SOX2-OT-215ENST00000493521 SNRPA1P09661 255 aaKnown RBP13.51□□□□□ -0.25
SOX2-OT-215ENST00000493521 LMNB1P20700 586 aa13.51□□□□□ -0.25
SOX2-OT-215ENST00000493521 TTLL7Q6ZT98 887 aa13.51□□□□□ -0.25
SOX2-OT-215ENST00000493521 CNBD1Q8NA66 436 aa13.51□□□□□ -0.25
SOX2-OT-215ENST00000493521 RTF1Q92541 710 aaKnown RBP13.51□□□□□ -0.25
SOX2-OT-215ENST00000493521 SETDB2Q96T68 719 aa13.51□□□□□ -0.25
SOX2-OT-215ENST00000493521 ABCC12Q96J65 1359 aa13.5□□□□□ -0.25
SOX2-OT-215ENST00000493521 POTEIP0CG38 1075 aa13.5□□□□□ -0.25
SOX2-OT-215ENST00000493521 POTEJP0CG39 1038 aa13.5□□□□□ -0.25
SOX2-OT-215ENST00000493521 SRGNP10124 158 aa13.5□□□□□ -0.25
SOX2-OT-215ENST00000493521 TAF7Q15545 349 aaPredicted RBP13.5□□□□□ -0.25
SOX2-OT-215ENST00000493521 RBM46Q8TBY0 533 aaKnown RBP13.5□□□□□ -0.25
SOX2-OT-215ENST00000493521 ARFGEF2Q9Y6D5 1785 aa13.5□□□□□ -0.25
SOX2-OT-215ENST00000493521 DICER1Q9UPY3 1922 aaKnown RBP13.49□□□□□ -0.25
SOX2-OT-215ENST00000493521 MYBBP1AQ9BQG0 1328 aaKnown RBP13.49□□□□□ -0.25
SOX2-OT-215ENST00000493521 GLTPD2A6NH11 291 aa13.49□□□□□ -0.25
SOX2-OT-215ENST00000493521 EIF4A1P60842 406 aaKnown RBP13.49□□□□□ -0.25
SOX2-OT-215ENST00000493521 PRPF40BQ6NWY9 871 aaKnown RBP13.49□□□□□ -0.25
SOX2-OT-215ENST00000493521 MRS2Q9HD23 443 aa13.49□□□□□ -0.25
SOX2-OT-215ENST00000493521 KDM2BQ8NHM5 1336 aa13.48□□□□□ -0.25
SOX2-OT-215ENST00000493521 ANXA1P04083 346 aa13.48□□□□□ -0.25
SOX2-OT-215ENST00000493521 PDE6BP35913 854 aa13.48□□□□□ -0.25
SOX2-OT-215ENST00000493521 APLP1P51693 650 aa13.48□□□□□ -0.25
SOX2-OT-215ENST00000493521 NFE2L2Q16236 605 aa13.48□□□□□ -0.25
SOX2-OT-215ENST00000493521 NUTM1Q86Y26 1132 aa13.48□□□□□ -0.25
SOX2-OT-215ENST00000493521 C7orf43Q8WVR3 580 aa13.48□□□□□ -0.25
SOX2-OT-215ENST00000493521 NIP7Q9Y221 180 aaKnown RBP eCLIP13.48□□□□□ -0.25
SOX2-OT-215ENST00000493521 NUP98P52948 1817 aa13.48□□□□□ -0.25
SOX2-OT-215ENST00000493521 COL4A5P29400 1685 aa13.47□□□□□ -0.25
SOX2-OT-215ENST00000493521 UBN2Q6ZU65 1347 aa13.47□□□□□ -0.25
SOX2-OT-215ENST00000493521 HTATSF1O43719 755 aaKnown RBP13.47□□□□□ -0.25
SOX2-OT-215ENST00000493521 PROSER3Q2NL68 480 aa13.47□□□□□ -0.25
SOX2-OT-215ENST00000493521 C3orf67Q6ZVT6 689 aa13.47□□□□□ -0.25
SOX2-OT-215ENST00000493521 NBPF5PQ86XG9 351 aaPredicted RBP13.47□□□□□ -0.25
SOX2-OT-215ENST00000493521 ZNF428Q96B54 188 aa13.47□□□□□ -0.25
SOX2-OT-215ENST00000493521 RRP7AQ9Y3A4 280 aaKnown RBP13.47□□□□□ -0.25
SOX2-OT-215ENST00000493521 DDNO94850 711 aaPredicted RBP13.46□□□□□ -0.25
SOX2-OT-215ENST00000493521 MYL6BP14649 208 aa13.46□□□□□ -0.25
SOX2-OT-215ENST00000493521 KRT24Q2M2I5 525 aa13.46□□□□□ -0.25
SOX2-OT-215ENST00000493521 CCDC146Q8IYE0 955 aa13.46□□□□□ -0.25
SOX2-OT-215ENST00000493521 KLRG2A4D1S0 409 aaPredicted RBP13.45□□□□□ -0.26
SOX2-OT-215ENST00000493521 NPHP1O15259 732 aa13.45□□□□□ -0.26
SOX2-OT-215ENST00000493521 GPTP24298 496 aa13.45□□□□□ -0.26
SOX2-OT-215ENST00000493521 ST5P78524 1137 aa13.45□□□□□ -0.26
SOX2-OT-215ENST00000493521 ERFEQ4G0M1 354 aa13.45□□□□□ -0.26
SOX2-OT-215ENST00000493521 IFFO2Q5TF58 517 aa13.45□□□□□ -0.26
SOX2-OT-215ENST00000493521 STYK1Q6J9G0 422 aa13.45□□□□□ -0.26
SOX2-OT-215ENST00000493521 LRP10Q7Z4F1 713 aa13.45□□□□□ -0.26
SOX2-OT-215ENST00000493521 C16orf71Q8IYS4 520 aaPredicted RBP13.45□□□□□ -0.26
SOX2-OT-215ENST00000493521 MASTLQ96GX5 879 aa13.45□□□□□ -0.26
SOX2-OT-215ENST00000493521 ZBTB3Q9H5J0 574 aa13.45□□□□□ -0.26
SOX2-OT-215ENST00000493521 PDIA6Q15084 440 aa13.44□□□□□ -0.26
SOX2-OT-215ENST00000493521 CLEC4GQ6UXB4 293 aa13.44□□□□□ -0.26
SOX2-OT-215ENST00000493521 NECTIN2Q92692 538 aa13.44□□□□□ -0.26
SOX2-OT-215ENST00000493521 TAOK3Q9H2K8 898 aa13.44□□□□□ -0.26
SOX2-OT-215ENST00000493521 ZNF277Q9NRM2 450 aaPredicted RBP13.44□□□□□ -0.26
SOX2-OT-215ENST00000493521 SNED1Q8TER0 1413 aa13.44□□□□□ -0.26
SOX2-OT-215ENST00000493521 ZNF541Q9H0D2 1346 aa13.43□□□□□ -0.26
SOX2-OT-215ENST00000493521 VEGFAP15692 232 aaPredicted RBP13.43□□□□□ -0.26
SOX2-OT-215ENST00000493521 FSTL1Q12841 308 aa13.43□□□□□ -0.26
SOX2-OT-215ENST00000493521 SUSD4Q5VX71 490 aa13.43□□□□□ -0.26
SOX2-OT-215ENST00000493521 KLRG1Q96E93 195 aa13.43□□□□□ -0.26
SOX2-OT-215ENST00000493521 NPM2Q86SE8 214 aaKnown RBP13.42□□□□□ -0.26
SOX2-OT-215ENST00000493521 FAM9BQ8IZU0 186 aa13.42□□□□□ -0.26
SOX2-OT-215ENST00000493521 SYNE4Q8N205 404 aa13.42□□□□□ -0.26
SOX2-OT-215ENST00000493521 CNKSR1Q969H4 720 aa13.42□□□□□ -0.26
SOX2-OT-215ENST00000493521 MAP3K15Q6ZN16 1313 aa13.41□□□□□ -0.26
SOX2-OT-215ENST00000493521 LTBP3Q9NS15 1303 aa13.41□□□□□ -0.26
SOX2-OT-215ENST00000493521 ZC3H4Q9UPT8 1303 aaKnown RBP13.41□□□□□ -0.26
SOX2-OT-215ENST00000493521 CENPBP07199 599 aaPredicted RBP13.41□□□□□ -0.26
SOX2-OT-215ENST00000493521 NPR1P16066 1061 aa13.41□□□□□ -0.26
SOX2-OT-215ENST00000493521 EIF2S2P20042 333 aaKnown RBP13.41□□□□□ -0.26
SOX2-OT-215ENST00000493521 RIPK4P57078 832 aa13.41□□□□□ -0.26
SOX2-OT-215ENST00000493521 SMC1BQ8NDV3 1235 aa13.41□□□□□ -0.26
SOX2-OT-215ENST00000493521 COL4A1P02462 1669 aa13.4□□□□□ -0.26
SOX2-OT-215ENST00000493521 LTBP1Q14766 1721 aa13.4□□□□□ -0.26
SOX2-OT-215ENST00000493521 TCERG1O14776 1098 aaKnown RBP13.4□□□□□ -0.26
SOX2-OT-215ENST00000493521 TMPOP42166 694 aaKnown RBP13.4□□□□□ -0.26
SOX2-OT-215ENST00000493521 NEUROD2Q15784 382 aa13.4□□□□□ -0.26
SOX2-OT-215ENST00000493521 TPTE2Q6XPS3 522 aa13.4□□□□□ -0.26
SOX2-OT-215ENST00000493521 TSPYL4Q9UJ04 414 aa13.4□□□□□ -0.26
SOX2-OT-215ENST00000493521 ZNF652Q9Y2D9 606 aa13.4□□□□□ -0.26
SOX2-OT-215ENST00000493521 NTSR2O95665 410 aa13.39□□□□□ -0.27
SOX2-OT-215ENST00000493521 COL13A1Q5TAT6 717 aaPredicted RBP13.39□□□□□ -0.27
SOX2-OT-215ENST00000493521 ZNF34Q8IZ26 560 aa13.39□□□□□ -0.27
SOX2-OT-215ENST00000493521 TRIM35Q9UPQ4 493 aa13.39□□□□□ -0.27
SOX2-OT-215ENST00000493521 TAF1P21675 1872 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms