RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 MAP3K2Q9Y2U5 619 aa24.39■■□□□ 1.49
RPS28-202ENST00000449223 BEND3Q5T5X7 828 aa24.38■■□□□ 1.49
RPS28-202ENST00000449223 LRRC4BQ9NT99 713 aa24.38■■□□□ 1.49
RPS28-202ENST00000449223 ZBTB7BO15156 539 aaPredicted RBP24.37■■□□□ 1.49
RPS28-202ENST00000449223 SLC4A10Q6U841 1118 aa24.37■■□□□ 1.49
RPS28-202ENST00000449223 PPP4R2Q9NY27 417 aa24.37■■□□□ 1.49
RPS28-202ENST00000449223 TTLL7Q6ZT98 887 aa24.36■■□□□ 1.49
RPS28-202ENST00000449223 RIC3Q7Z5B4 369 aa24.36■■□□□ 1.49
RPS28-202ENST00000449223 METTL22Q9BUU2 404 aaPredicted RBP24.36■■□□□ 1.49
RPS28-202ENST00000449223 ZBTB40Q9NUA8 1239 aa24.36■■□□□ 1.49
RPS28-202ENST00000449223 APBA3O96018 575 aa24.35■■□□□ 1.49
RPS28-202ENST00000449223 PROM2Q8N271 834 aa24.35■■□□□ 1.49
RPS28-202ENST00000449223 LINS1Q8NG48 757 aa24.35■■□□□ 1.49
RPS28-202ENST00000449223 BCORQ6W2J9 1755 aa24.35■■□□□ 1.49
RPS28-202ENST00000449223 ALDH1L1O75891 902 aa24.35■■□□□ 1.49
RPS28-202ENST00000449223 KCNQ4P56696 695 aa24.35■■□□□ 1.49
RPS28-202ENST00000449223 TXNRD1Q16881 649 aa24.35■■□□□ 1.49
RPS28-202ENST00000449223 SRCIN1Q9C0H9 1055 aa24.35■■□□□ 1.49
RPS28-202ENST00000449223 ANKRD36CQ5JPF3 1778 aa24.34■■□□□ 1.49
RPS28-202ENST00000449223 UBR3Q6ZT12 1888 aa24.34■■□□□ 1.49
RPS28-202ENST00000449223 MAP3K15Q6ZN16 1313 aa24.34■■□□□ 1.49
RPS28-202ENST00000449223 COL15A1P39059 1388 aa24.34■■□□□ 1.49
RPS28-202ENST00000449223 ERVV-1B6SEH8 477 aa24.33■■□□□ 1.49
RPS28-202ENST00000449223 RPS6KA4O75676 772 aa24.33■■□□□ 1.49
RPS28-202ENST00000449223 NUP98P52948 1817 aa24.33■■□□□ 1.49
RPS28-202ENST00000449223 RGL2O15211 777 aa24.32■■□□□ 1.48
RPS28-202ENST00000449223 NEXNQ0ZGT2 675 aa24.32■■□□□ 1.48
RPS28-202ENST00000449223 KIF6Q6ZMV9 814 aa24.32■■□□□ 1.48
RPS28-202ENST00000449223 SCN7AQ01118 1682 aa24.32■■□□□ 1.48
RPS28-202ENST00000449223 AFDNP55196 1824 aaKnown RBP24.32■■□□□ 1.48
RPS28-202ENST00000449223 IGKV5-2P06315 115 aa24.3■■□□□ 1.48
RPS28-202ENST00000449223 NPM2Q86SE8 214 aaKnown RBP24.3■■□□□ 1.48
RPS28-202ENST00000449223 A0A087WZG4 1122 aa24.3■■□□□ 1.48
RPS28-202ENST00000449223 GIGYF2Q6Y7W6 1299 aaKnown RBP24.3■■□□□ 1.48
RPS28-202ENST00000449223 DZIP3Q86Y13 1208 aaKnown RBP24.3■■□□□ 1.48
RPS28-202ENST00000449223 C4AP0C0L4 1744 aa24.29■■□□□ 1.48
RPS28-202ENST00000449223 USP44Q9H0E7 712 aa24.29■■□□□ 1.48
RPS28-202ENST00000449223 ZBTB3Q9H5J0 574 aa24.29■■□□□ 1.48
RPS28-202ENST00000449223 ZNF330Q9Y3S2 320 aaPredicted RBP24.29■■□□□ 1.48
RPS28-202ENST00000449223 UTYO14607 1347 aa24.28■■□□□ 1.48
RPS28-202ENST00000449223 NEURL1BA8MQ27 555 aa24.28■■□□□ 1.48
RPS28-202ENST00000449223 GNAI3P08754 354 aa24.28■■□□□ 1.48
RPS28-202ENST00000449223 TRIM28Q13263 835 aaKnown RBP24.28■■□□□ 1.48
RPS28-202ENST00000449223 MEIS3Q99687 375 aa24.28■■□□□ 1.48
RPS28-202ENST00000449223 GNPATO15228 680 aa24.27■■□□□ 1.48
RPS28-202ENST00000449223 CAMTA2O94983 1202 aa24.27■■□□□ 1.48
RPS28-202ENST00000449223 ADRA2BP18089 450 aa24.27■■□□□ 1.48
RPS28-202ENST00000449223 CCDC125Q86Z20 511 aa24.27■■□□□ 1.48
RPS28-202ENST00000449223 MYD88Q99836 296 aa24.27■■□□□ 1.48
RPS28-202ENST00000449223 RTCBQ9Y3I0 505 aaKnown RBP24.27■■□□□ 1.48
RPS28-202ENST00000449223 TCIRG1Q13488 830 aa24.26■■□□□ 1.47
RPS28-202ENST00000449223 CWF19L2Q2TBE0 894 aaKnown RBP24.26■■□□□ 1.47
RPS28-202ENST00000449223 HSP90AB3PQ58FF7 597 aa24.26■■□□□ 1.47
RPS28-202ENST00000449223 CAMKK2Q96RR4 588 aa24.26■■□□□ 1.47
RPS28-202ENST00000449223 ISCA1Q9BUE6 129 aa24.26■■□□□ 1.47
RPS28-202ENST00000449223 AK7Q96M32 723 aa24.25■■□□□ 1.47
RPS28-202ENST00000449223 GCKRQ14397 625 aa24.25■■□□□ 1.47
RPS28-202ENST00000449223 TBC1D2BQ9UPU7 963 aa24.25■■□□□ 1.47
RPS28-202ENST00000449223 HLFQ16534 295 aa24.24■■□□□ 1.47
RPS28-202ENST00000449223 CLEC4GQ6UXB4 293 aa24.24■■□□□ 1.47
RPS28-202ENST00000449223 CCDC191Q8NCU4 936 aa24.24■■□□□ 1.47
RPS28-202ENST00000449223 PCDHB15Q9Y5E8 787 aa24.24■■□□□ 1.47
RPS28-202ENST00000449223 SSFA2P28290 1259 aa24.23■■□□□ 1.47
RPS28-202ENST00000449223 CCDC136Q96JN2 1154 aa24.23■■□□□ 1.47
RPS28-202ENST00000449223 TUBGCP6Q96RT7 1819 aa24.22■■□□□ 1.47
RPS28-202ENST00000449223 GRM8O00222 908 aa24.22■■□□□ 1.47
RPS28-202ENST00000449223 SF3B2Q13435 895 aaKnown RBP24.22■■□□□ 1.47
RPS28-202ENST00000449223 AMIGO3Q86WK7 504 aa24.22■■□□□ 1.47
RPS28-202ENST00000449223 AKT1S1Q96B36 256 aa24.22■■□□□ 1.47
RPS28-202ENST00000449223 NARFQ9UHQ1 456 aa24.22■■□□□ 1.47
RPS28-202ENST00000449223 BAG6P46379 1132 aa24.21■■□□□ 1.47
RPS28-202ENST00000449223 QSER1Q2KHR3 1735 aa24.21■■□□□ 1.47
RPS28-202ENST00000449223 GNAI2P04899 355 aa24.2■■□□□ 1.47
RPS28-202ENST00000449223 UBTFL1P0CB47 393 aaPredicted RBP24.2■■□□□ 1.47
RPS28-202ENST00000449223 ZNF34Q8IZ26 560 aa24.2■■□□□ 1.47
RPS28-202ENST00000449223 ARHGEF1Q92888 912 aaKnown RBP24.2■■□□□ 1.47
RPS28-202ENST00000449223 CWC25Q9NXE8 425 aaPredicted RBP24.2■■□□□ 1.47
RPS28-202ENST00000449223 HDAC5Q9UQL6 1122 aa24.2■■□□□ 1.47
RPS28-202ENST00000449223 ZNF652Q9Y2D9 606 aa24.2■■□□□ 1.47
RPS28-202ENST00000449223 ATP5J2-PTCD1G3V325 749 aa24.2■■□□□ 1.46
RPS28-202ENST00000449223 NBPF7P0C2Y1 421 aaPredicted RBP24.2■■□□□ 1.46
RPS28-202ENST00000449223 B4GALNT3Q6L9W6 998 aa24.2■■□□□ 1.46
RPS28-202ENST00000449223 C9orf78Q9NZ63 289 aaPredicted RBP24.2■■□□□ 1.46
RPS28-202ENST00000449223 EN1Q05925 392 aaPredicted RBP24.19■■□□□ 1.46
RPS28-202ENST00000449223 HDAC1Q13547 482 aaPredicted RBP24.19■■□□□ 1.46
RPS28-202ENST00000449223 EZH2Q15910 746 aaKnown RBP24.19■■□□□ 1.46
RPS28-202ENST00000449223 TRAPPC3LQ5T215 181 aa24.19■■□□□ 1.46
RPS28-202ENST00000449223 ARXQ96QS3 562 aa24.19■■□□□ 1.46
RPS28-202ENST00000449223 KDM2BQ8NHM5 1336 aa24.18■■□□□ 1.46
RPS28-202ENST00000449223 USP42Q9H9J4 1324 aaKnown RBP24.18■■□□□ 1.46
RPS28-202ENST00000449223 RPAP2Q8IXW5 612 aaPredicted RBP24.18■■□□□ 1.46
RPS28-202ENST00000449223 COL24A1Q17RW2 1714 aa24.17■■□□□ 1.46
RPS28-202ENST00000449223 CASP7P55210 303 aa24.17■■□□□ 1.46
RPS28-202ENST00000449223 ZNF827Q17R98 1081 aa24.17■■□□□ 1.46
RPS28-202ENST00000449223 NLRP10Q86W26 655 aa24.17■■□□□ 1.46
RPS28-202ENST00000449223 C1orf115Q9H7X2 142 aa24.17■■□□□ 1.46
RPS28-202ENST00000449223 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.16■■□□□ 1.46
RPS28-202ENST00000449223 H7C1W4 665 aa24.16■■□□□ 1.46
RPS28-202ENST00000449223 CEP85Q6P2H3 762 aa24.16■■□□□ 1.46
RPS28-202ENST00000449223 ANKRD44Q8N8A2 993 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms