RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 BMP2KLQ5H9B9 411 aa18.56■□□□□ 0.56
CPSF7-205ENST00000439958 KDM3BQ7LBC6 1761 aa18.55■□□□□ 0.56
CPSF7-205ENST00000439958 ATP6V1AP38606 617 aa18.55■□□□□ 0.56
CPSF7-205ENST00000439958 G3BP1Q13283 466 aaKnown RBP eCLIP18.55■□□□□ 0.56
CPSF7-205ENST00000439958 C22orf23Q9BZE7 217 aa18.55■□□□□ 0.56
CPSF7-205ENST00000439958 MX1P20591 662 aa18.54■□□□□ 0.56
CPSF7-205ENST00000439958 TBC1D9Q6ZT07 1266 aa18.54■□□□□ 0.56
CPSF7-205ENST00000439958 PLBD2Q8NHP8 589 aa18.54■□□□□ 0.56
CPSF7-205ENST00000439958 HDAC5Q9UQL6 1122 aa18.54■□□□□ 0.56
CPSF7-205ENST00000439958 RHPN1Q8TCX5 695 aa18.54■□□□□ 0.56
CPSF7-205ENST00000439958 ABCA3Q99758 1704 aa18.54■□□□□ 0.56
CPSF7-205ENST00000439958 ABCC6O95255 1503 aa18.53■□□□□ 0.56
CPSF7-205ENST00000439958 SPATA31A5Q5VU36 1347 aa18.53■□□□□ 0.56
CPSF7-205ENST00000439958 SPATA31A7Q8IWB4 1347 aa18.53■□□□□ 0.56
CPSF7-205ENST00000439958 TTC22Q5TAA0 569 aa18.53■□□□□ 0.56
CPSF7-205ENST00000439958 ZBTB1Q9Y2K1 713 aa18.53■□□□□ 0.56
CPSF7-205ENST00000439958 PDE1AP54750 535 aa18.53■□□□□ 0.56
CPSF7-205ENST00000439958 EPHA10Q5JZY3 1008 aa18.53■□□□□ 0.56
CPSF7-205ENST00000439958 SCN11AQ9UI33 1791 aa18.53■□□□□ 0.56
CPSF7-205ENST00000439958 VIRMAQ69YN4 1812 aaKnown RBP18.53■□□□□ 0.56
CPSF7-205ENST00000439958 JCADQ9P266 1359 aa18.53■□□□□ 0.56
CPSF7-205ENST00000439958 SDSP20132 328 aa18.53■□□□□ 0.56
CPSF7-205ENST00000439958 SSH3Q8TE77 659 aa18.53■□□□□ 0.56
CPSF7-205ENST00000439958 AHDC1Q5TGY3 1603 aaPredicted RBP18.52■□□□□ 0.56
CPSF7-205ENST00000439958 CASC1Q6TDU7 716 aa18.52■□□□□ 0.56
CPSF7-205ENST00000439958 CDC45O75419 566 aa18.52■□□□□ 0.56
CPSF7-205ENST00000439958 IFIT2P09913 472 aaKnown RBP18.52■□□□□ 0.55
CPSF7-205ENST00000439958 CLASRPQ8N2M8 674 aaKnown RBP18.52■□□□□ 0.55
CPSF7-205ENST00000439958 KIF1BPQ96EK5 621 aa18.51■□□□□ 0.55
CPSF7-205ENST00000439958 CDCA7Q9BWT1 371 aaPredicted RBP18.51■□□□□ 0.55
CPSF7-205ENST00000439958 CWC25Q9NXE8 425 aaPredicted RBP18.51■□□□□ 0.55
CPSF7-205ENST00000439958 LMBR1LQ6UX01 489 aa18.51■□□□□ 0.55
CPSF7-205ENST00000439958 AACSQ86V21 672 aa18.51■□□□□ 0.55
CPSF7-205ENST00000439958 CCDC8Q9H0W5 538 aaPredicted RBP18.51■□□□□ 0.55
CPSF7-205ENST00000439958 FAM89AQ96GI7 184 aa18.5■□□□□ 0.55
CPSF7-205ENST00000439958 PARP4Q9UKK3 1724 aaKnown RBP18.5■□□□□ 0.55
CPSF7-205ENST00000439958 SLKQ9H2G2 1235 aaPredicted RBP18.5■□□□□ 0.55
CPSF7-205ENST00000439958 SMIM5Q71RC9 77 aa18.5■□□□□ 0.55
CPSF7-205ENST00000439958 SLC4A9Q96Q91 983 aa18.5■□□□□ 0.55
CPSF7-205ENST00000439958 TEX13AQ9BXU3 409 aaPredicted RBP18.49■□□□□ 0.55
CPSF7-205ENST00000439958 IBTKQ9P2D0 1353 aaPredicted RBP18.49■□□□□ 0.55
CPSF7-205ENST00000439958 HSP90AB4PQ58FF6 505 aa18.49■□□□□ 0.55
CPSF7-205ENST00000439958 THRAP3Q9Y2W1 955 aaKnown RBP18.49■□□□□ 0.55
CPSF7-205ENST00000439958 TAF7LQ5H9L4 462 aa18.48■□□□□ 0.55
CPSF7-205ENST00000439958 COL14A1Q05707 1796 aaKnown RBP18.48■□□□□ 0.55
CPSF7-205ENST00000439958 PTF1AQ7RTS3 328 aa18.48■□□□□ 0.55
CPSF7-205ENST00000439958 LRP10Q7Z4F1 713 aa18.48■□□□□ 0.55
CPSF7-205ENST00000439958 KAZALD1Q96I82 304 aa18.48■□□□□ 0.55
CPSF7-205ENST00000439958 CACNA1FO60840 1977 aa18.47■□□□□ 0.55
CPSF7-205ENST00000439958 COL16A1Q07092 1604 aaPredicted RBP18.47■□□□□ 0.55
CPSF7-205ENST00000439958 LOC102724428A0A0B4J2F2 783 aa18.47■□□□□ 0.55
CPSF7-205ENST00000439958 SIK1P57059 783 aa18.47■□□□□ 0.55
CPSF7-205ENST00000439958 SYNE4Q8N205 404 aa18.47■□□□□ 0.55
CPSF7-205ENST00000439958 PXDNLA1KZ92 1463 aa18.47■□□□□ 0.55
CPSF7-205ENST00000439958 HLFQ16534 295 aa18.47■□□□□ 0.55
CPSF7-205ENST00000439958 DZIP3Q86Y13 1208 aaKnown RBP18.47■□□□□ 0.55
CPSF7-205ENST00000439958 PKD1L3Q7Z443 1732 aa18.47■□□□□ 0.55
CPSF7-205ENST00000439958 RAB11FIP3O75154 756 aa18.46■□□□□ 0.55
CPSF7-205ENST00000439958 TBC1D32Q96NH3 1257 aa18.46■□□□□ 0.55
CPSF7-205ENST00000439958 AFF2P51816 1311 aa18.46■□□□□ 0.55
CPSF7-205ENST00000439958 C5P01031 1676 aa18.46■□□□□ 0.55
CPSF7-205ENST00000439958 BICDL1Q6ZP65 573 aa18.46■□□□□ 0.55
CPSF7-205ENST00000439958 NEUROD6Q96NK8 337 aa18.46■□□□□ 0.55
CPSF7-205ENST00000439958 POLA2Q14181 598 aa18.45■□□□□ 0.54
CPSF7-205ENST00000439958 BECN1Q14457 450 aa18.45■□□□□ 0.54
CPSF7-205ENST00000439958 ZNF594Q96JF6 807 aaPredicted RBP18.45■□□□□ 0.54
CPSF7-205ENST00000439958 CYP19A1P11511 503 aaPredicted RBP18.45■□□□□ 0.54
CPSF7-205ENST00000439958 EP400Q96L91 3159 aa18.44■□□□□ 0.54
CPSF7-205ENST00000439958 MRC1P22897 1456 aa18.44■□□□□ 0.54
CPSF7-205ENST00000439958 BCL9O00512 1426 aa18.44■□□□□ 0.54
CPSF7-205ENST00000439958 TNS2Q63HR2 1409 aa18.44■□□□□ 0.54
CPSF7-205ENST00000439958 TRMT112Q9UI30 125 aaKnown RBP18.44■□□□□ 0.54
CPSF7-205ENST00000439958 HSP90AA1P07900 732 aaKnown RBP18.44■□□□□ 0.54
CPSF7-205ENST00000439958 ANO2Q9NQ90 1003 aa18.44■□□□□ 0.54
CPSF7-205ENST00000439958 ERBB4Q15303 1308 aa18.43■□□□□ 0.54
CPSF7-205ENST00000439958 CRKLP46109 303 aaKnown RBP18.43■□□□□ 0.54
CPSF7-205ENST00000439958 FOXD4L1Q9NU39 408 aa18.43■□□□□ 0.54
CPSF7-205ENST00000439958 DISP2A7MBM2 1401 aa18.43■□□□□ 0.54
CPSF7-205ENST00000439958 VPS72Q15906 364 aa18.43■□□□□ 0.54
CPSF7-205ENST00000439958 GPATCH3Q96I76 525 aa18.43■□□□□ 0.54
CPSF7-205ENST00000439958 TCIRG1Q13488 830 aa18.42■□□□□ 0.54
CPSF7-205ENST00000439958 SIPA1L3O60292 1781 aaPredicted RBP18.42■□□□□ 0.54
CPSF7-205ENST00000439958 NPHP1O15259 732 aa18.42■□□□□ 0.54
CPSF7-205ENST00000439958 BOLA2Q9H3K6 86 aa18.42■□□□□ 0.54
CPSF7-205ENST00000439958 PALLDQ8WX93 1383 aa18.42■□□□□ 0.54
CPSF7-205ENST00000439958 ERC1Q8IUD2 1116 aa18.41■□□□□ 0.54
CPSF7-205ENST00000439958 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.41■□□□□ 0.54
CPSF7-205ENST00000439958 BARGINQ6ZT62 677 aa18.41■□□□□ 0.54
CPSF7-205ENST00000439958 VSIG10Q8N0Z9 540 aa18.41■□□□□ 0.54
CPSF7-205ENST00000439958 TLR7Q9NYK1 1049 aaKnown RBP18.41■□□□□ 0.54
CPSF7-205ENST00000439958 NDUFB9Q9Y6M9 179 aa18.41■□□□□ 0.54
CPSF7-205ENST00000439958 ITPK1Q13572 414 aa18.41■□□□□ 0.54
CPSF7-205ENST00000439958 CCDC57Q2TAC2 916 aa18.41■□□□□ 0.54
CPSF7-205ENST00000439958 CCDC191Q8NCU4 936 aa18.41■□□□□ 0.54
CPSF7-205ENST00000439958 TFCP2Q12800 502 aa18.4■□□□□ 0.54
CPSF7-205ENST00000439958 CCDC87Q9NVE4 849 aa18.4■□□□□ 0.54
CPSF7-205ENST00000439958 PLEKHG2Q9H7P9 1386 aa18.39■□□□□ 0.53
CPSF7-205ENST00000439958 PHF14O94880 888 aa18.39■□□□□ 0.53
CPSF7-205ENST00000439958 SASH1O94885 1247 aa18.39■□□□□ 0.53
CPSF7-205ENST00000439958 GTF2E1P29083 439 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms