RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 SPC25Q9HBM1 224 aa7.17□□□□□ -1.26
HMGB3P10-201ENST00000434734 TOR4AQ9NXH8 423 aa7.17□□□□□ -1.26
HMGB3P10-201ENST00000434734 NOD1Q9Y239 953 aa7.17□□□□□ -1.26
HMGB3P10-201ENST00000434734 PAX3P23760 479 aa7.16□□□□□ -1.26
HMGB3P10-201ENST00000434734 NFE2L2Q16236 605 aa7.16□□□□□ -1.26
HMGB3P10-201ENST00000434734 CCDC102BQ68D86 513 aa7.16□□□□□ -1.26
HMGB3P10-201ENST00000434734 CYP4X1Q8N118 509 aa7.16□□□□□ -1.26
HMGB3P10-201ENST00000434734 JDP2Q8WYK2 163 aa7.16□□□□□ -1.26
HMGB3P10-201ENST00000434734 EVA1BQ9NVM1 165 aa7.16□□□□□ -1.26
HMGB3P10-201ENST00000434734 LAS1LQ9Y4W2 734 aaKnown RBP7.16□□□□□ -1.26
HMGB3P10-201ENST00000434734 FAM187AA6NFU0 413 aa7.15□□□□□ -1.26
HMGB3P10-201ENST00000434734 GPR182O15218 404 aa7.15□□□□□ -1.26
HMGB3P10-201ENST00000434734 NDUFB5O43674 189 aa7.15□□□□□ -1.26
HMGB3P10-201ENST00000434734 CTSHP09668 335 aa7.15□□□□□ -1.26
HMGB3P10-201ENST00000434734 NPR3P17342 541 aa7.15□□□□□ -1.26
HMGB3P10-201ENST00000434734 GTF2IP78347 998 aa7.15□□□□□ -1.26
HMGB3P10-201ENST00000434734 PLCB3Q01970 1234 aa7.15□□□□□ -1.26
HMGB3P10-201ENST00000434734 ZNF654Q8IZM8 581 aa7.15□□□□□ -1.26
HMGB3P10-201ENST00000434734 TMC1Q8TDI8 760 aa7.15□□□□□ -1.26
HMGB3P10-201ENST00000434734 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.15□□□□□ -1.26
HMGB3P10-201ENST00000434734 UBA5Q9GZZ9 404 aa7.15□□□□□ -1.26
HMGB3P10-201ENST00000434734 SRA1Q9HD15 236 aaKnown RBP7.15□□□□□ -1.26
HMGB3P10-201ENST00000434734 PCDHB9Q9Y5E1 797 aa7.15□□□□□ -1.26
HMGB3P10-201ENST00000434734 WEE1P30291 646 aa7.14□□□□□ -1.27
HMGB3P10-201ENST00000434734 MAP7D1Q3KQU3 841 aa7.14□□□□□ -1.27
HMGB3P10-201ENST00000434734 SNIP1Q8TAD8 396 aaKnown RBP7.14□□□□□ -1.27
HMGB3P10-201ENST00000434734 CCDC136Q96JN2 1154 aa7.14□□□□□ -1.27
HMGB3P10-201ENST00000434734 HINFPQ9BQA5 517 aa7.14□□□□□ -1.27
HMGB3P10-201ENST00000434734 OCSTAMPQ9BR26 566 aa7.14□□□□□ -1.27
HMGB3P10-201ENST00000434734 CYLDQ9NQC7 956 aa7.14□□□□□ -1.27
HMGB3P10-201ENST00000434734 CCDC87Q9NVE4 849 aa7.14□□□□□ -1.27
HMGB3P10-201ENST00000434734 FAM13AO94988 1023 aa7.13□□□□□ -1.27
HMGB3P10-201ENST00000434734 AVPP01185 164 aa7.13□□□□□ -1.27
HMGB3P10-201ENST00000434734 PDGFRBP09619 1106 aa7.13□□□□□ -1.27
HMGB3P10-201ENST00000434734 LYPD8Q6UX82 237 aa7.13□□□□□ -1.27
HMGB3P10-201ENST00000434734 USP48Q86UV5 1035 aa7.13□□□□□ -1.27
HMGB3P10-201ENST00000434734 CRIPAKQ8N1N5 446 aa7.13□□□□□ -1.27
HMGB3P10-201ENST00000434734 NME8Q8N427 588 aa7.13□□□□□ -1.27
HMGB3P10-201ENST00000434734 CCDC85AQ96PX6 553 aaPredicted RBP7.13□□□□□ -1.27
HMGB3P10-201ENST00000434734 TTF2Q9UNY4 1162 aaKnown RBP7.13□□□□□ -1.27
HMGB3P10-201ENST00000434734 TTC24A2A3L6 582 aaPredicted RBP7.12□□□□□ -1.27
HMGB3P10-201ENST00000434734 ATF4P18848 351 aaPredicted RBP7.12□□□□□ -1.27
HMGB3P10-201ENST00000434734 FGD1P98174 961 aa7.12□□□□□ -1.27
HMGB3P10-201ENST00000434734 CTC1Q2NKJ3 1217 aa7.12□□□□□ -1.27
HMGB3P10-201ENST00000434734 PLEKHG4Q58EX7 1191 aa7.12□□□□□ -1.27
HMGB3P10-201ENST00000434734 OXLD1Q5BKU9 147 aa7.12□□□□□ -1.27
HMGB3P10-201ENST00000434734 RC3H1Q5TC82 1133 aaKnown RBP7.12□□□□□ -1.27
HMGB3P10-201ENST00000434734 PTCRAQ6ISU1 281 aaPredicted RBP7.12□□□□□ -1.27
HMGB3P10-201ENST00000434734 TSHZ1Q6ZSZ6 1077 aa7.12□□□□□ -1.27
HMGB3P10-201ENST00000434734 TMTC2Q8N394 836 aa7.12□□□□□ -1.27
HMGB3P10-201ENST00000434734 TSEN2Q8NCE0 465 aaKnown RBP7.12□□□□□ -1.27
HMGB3P10-201ENST00000434734 MRGPRX2Q96LB1 330 aa7.12□□□□□ -1.27
HMGB3P10-201ENST00000434734 RPS6KC1Q96S38 1066 aa7.12□□□□□ -1.27
HMGB3P10-201ENST00000434734 KANSL2Q9H9L4 492 aa7.12□□□□□ -1.27
HMGB3P10-201ENST00000434734 MAP10Q9P2G4 905 aa7.12□□□□□ -1.27
HMGB3P10-201ENST00000434734 PNMA2Q9UL42 364 aa7.12□□□□□ -1.27
HMGB3P10-201ENST00000434734 SH3BP5O60239 455 aa7.11□□□□□ -1.27
HMGB3P10-201ENST00000434734 FZD6O60353 706 aa7.11□□□□□ -1.27
HMGB3P10-201ENST00000434734 PTCD1O75127 700 aaKnown RBP7.11□□□□□ -1.27
HMGB3P10-201ENST00000434734 GJA8P48165 433 aa7.11□□□□□ -1.27
HMGB3P10-201ENST00000434734 SKOR1P84550 965 aa7.11□□□□□ -1.27
HMGB3P10-201ENST00000434734 SETQ01105 290 aaPredicted RBP7.11□□□□□ -1.27
HMGB3P10-201ENST00000434734 ATP2B2Q01814 1243 aa7.11□□□□□ -1.27
HMGB3P10-201ENST00000434734 C4orf46Q504U0 113 aa7.11□□□□□ -1.27
HMGB3P10-201ENST00000434734 VPS37DQ86XT2 251 aa7.11□□□□□ -1.27
HMGB3P10-201ENST00000434734 CCAR1Q8IX12 1150 aaKnown RBP7.11□□□□□ -1.27
HMGB3P10-201ENST00000434734 PLCD4Q9BRC7 762 aa7.11□□□□□ -1.27
HMGB3P10-201ENST00000434734 IER2Q9BTL4 223 aa7.11□□□□□ -1.27
HMGB3P10-201ENST00000434734 UNC93B1Q9H1C4 597 aa7.11□□□□□ -1.27
HMGB3P10-201ENST00000434734 RBM19Q9Y4C8 960 aaKnown RBP7.11□□□□□ -1.27
HMGB3P10-201ENST00000434734 PNMA6FA0A0J9YX94 578 aa7.1□□□□□ -1.27
HMGB3P10-201ENST00000434734 PRC1O43663 620 aa7.1□□□□□ -1.27
HMGB3P10-201ENST00000434734 F12P00748 615 aaPredicted RBP7.1□□□□□ -1.27
HMGB3P10-201ENST00000434734 ITGAEP38570 1179 aa7.1□□□□□ -1.27
HMGB3P10-201ENST00000434734 SMCPP49901 116 aaPredicted RBP7.1□□□□□ -1.27
HMGB3P10-201ENST00000434734 BIRC2Q13490 618 aa7.1□□□□□ -1.27
HMGB3P10-201ENST00000434734 ODR4Q5SWX8 454 aa7.1□□□□□ -1.27
HMGB3P10-201ENST00000434734 RAVER1Q8IY67 606 aaKnown RBP7.1□□□□□ -1.27
HMGB3P10-201ENST00000434734 CKAP2LQ8IYA6 745 aa7.1□□□□□ -1.27
HMGB3P10-201ENST00000434734 CRELD1Q96HD1 420 aa7.1□□□□□ -1.27
HMGB3P10-201ENST00000434734 FAM129BQ96TA1 746 aa7.1□□□□□ -1.27
HMGB3P10-201ENST00000434734 THRAP3Q9Y2W1 955 aaKnown RBP7.1□□□□□ -1.27
HMGB3P10-201ENST00000434734 PCDHGA11Q9Y5H2 935 aa7.1□□□□□ -1.27
HMGB3P10-201ENST00000434734 TNFRSF10BO14763 440 aa7.09□□□□□ -1.27
HMGB3P10-201ENST00000434734 FOXD4Q12950 439 aaPredicted RBP7.09□□□□□ -1.27
HMGB3P10-201ENST00000434734 PAK2Q13177 524 aa7.09□□□□□ -1.27
HMGB3P10-201ENST00000434734 ENOX2Q16206 610 aaKnown RBP7.09□□□□□ -1.27
HMGB3P10-201ENST00000434734 ZFYVE27Q5T4F4 411 aa7.09□□□□□ -1.27
HMGB3P10-201ENST00000434734 DMRTB1Q96MA1 342 aa7.09□□□□□ -1.27
HMGB3P10-201ENST00000434734 CFHR5Q9BXR6 569 aa7.09□□□□□ -1.27
HMGB3P10-201ENST00000434734 DOLKQ9UPQ8 538 aa7.09□□□□□ -1.27
HMGB3P10-201ENST00000434734 PRKAB1Q9Y478 270 aa7.09□□□□□ -1.27
HMGB3P10-201ENST00000434734 PPP1R12AO14974 1030 aaPredicted RBP7.08□□□□□ -1.28
HMGB3P10-201ENST00000434734 SMPD1P17405 629 aa7.08□□□□□ -1.28
HMGB3P10-201ENST00000434734 MZF1P28698 734 aaPredicted RBP7.08□□□□□ -1.28
HMGB3P10-201ENST00000434734 GNA15P30679 374 aa7.08□□□□□ -1.28
HMGB3P10-201ENST00000434734 EVA1CP58658 441 aa7.08□□□□□ -1.28
HMGB3P10-201ENST00000434734 SH3BP2P78314 561 aa7.08□□□□□ -1.28
HMGB3P10-201ENST00000434734 PTPN12Q05209 780 aaKnown RBP7.08□□□□□ -1.28
HMGB3P10-201ENST00000434734 LONRF3Q496Y0 759 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms