RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 ZNF330Q9Y3S2 320 aaPredicted RBP12.53□□□□□ -0.4
DDX39B-202ENST00000396172 LAMB2P55268 1798 aa12.52□□□□□ -0.4
DDX39B-202ENST00000396172 COL24A1Q17RW2 1714 aa12.52□□□□□ -0.4
DDX39B-202ENST00000396172 EN1Q05925 392 aaPredicted RBP12.52□□□□□ -0.4
DDX39B-202ENST00000396172 KSR2Q6VAB6 950 aa12.52□□□□□ -0.4
DDX39B-202ENST00000396172 PLBD2Q8NHP8 589 aa12.52□□□□□ -0.4
DDX39B-202ENST00000396172 CHMP4BQ9H444 224 aaKnown RBP12.52□□□□□ -0.4
DDX39B-202ENST00000396172 ADCY9O60503 1353 aa12.52□□□□□ -0.41
DDX39B-202ENST00000396172 SSFA2P28290 1259 aa12.52□□□□□ -0.41
DDX39B-202ENST00000396172 PIP4K2AP48426 406 aaPredicted RBP12.52□□□□□ -0.41
DDX39B-202ENST00000396172 NEXNQ0ZGT2 675 aa12.52□□□□□ -0.41
DDX39B-202ENST00000396172 AIMP1Q12904 312 aaKnown RBP12.52□□□□□ -0.41
DDX39B-202ENST00000396172 ANKRD13DQ6ZTN6 518 aa12.52□□□□□ -0.41
DDX39B-202ENST00000396172 RIC3Q7Z5B4 369 aa12.52□□□□□ -0.41
DDX39B-202ENST00000396172 FLAD1Q8NFF5 587 aa12.52□□□□□ -0.41
DDX39B-202ENST00000396172 IBTKQ9P2D0 1353 aaPredicted RBP12.51□□□□□ -0.41
DDX39B-202ENST00000396172 CASZ1Q86V15 1759 aa12.51□□□□□ -0.41
DDX39B-202ENST00000396172 MAP3K15Q6ZN16 1313 aa12.51□□□□□ -0.41
DDX39B-202ENST00000396172 CCT4P50991 539 aaKnown RBP12.51□□□□□ -0.41
DDX39B-202ENST00000396172 KCNQ4P56696 695 aa12.51□□□□□ -0.41
DDX39B-202ENST00000396172 EZH2Q15910 746 aaKnown RBP12.51□□□□□ -0.41
DDX39B-202ENST00000396172 DZIP3Q86Y13 1208 aaKnown RBP12.51□□□□□ -0.41
DDX39B-202ENST00000396172 PROM2Q8N271 834 aa12.51□□□□□ -0.41
DDX39B-202ENST00000396172 DNAAF4Q8WXU2 420 aa12.51□□□□□ -0.41
DDX39B-202ENST00000396172 ZNF652Q9Y2D9 606 aa12.51□□□□□ -0.41
DDX39B-202ENST00000396172 ERVV-1B6SEH8 477 aa12.5□□□□□ -0.41
DDX39B-202ENST00000396172 PLIN1O60240 522 aa12.5□□□□□ -0.41
DDX39B-202ENST00000396172 HSP90AB3PQ58FF7 597 aa12.5□□□□□ -0.41
DDX39B-202ENST00000396172 PI4KAP2A4QPH2 592 aa12.5□□□□□ -0.41
DDX39B-202ENST00000396172 PI4KAP1Q8N8J0 262 aa12.5□□□□□ -0.41
DDX39B-202ENST00000396172 UPF1Q92900 1129 aaKnown RBP eCLIP12.5□□□□□ -0.41
DDX39B-202ENST00000396172 STK32BQ9NY57 414 aa12.5□□□□□ -0.41
DDX39B-202ENST00000396172 MAP3K2Q9Y2U5 619 aa12.5□□□□□ -0.41
DDX39B-202ENST00000396172 AAMPQ13685 434 aa12.49□□□□□ -0.41
DDX39B-202ENST00000396172 TRAPPC3LQ5T215 181 aa12.49□□□□□ -0.41
DDX39B-202ENST00000396172 CLUAP1Q96AJ1 413 aa12.49□□□□□ -0.41
DDX39B-202ENST00000396172 AKT1S1Q96B36 256 aa12.49□□□□□ -0.41
DDX39B-202ENST00000396172 DDX19BQ9UMR2 479 aa12.49□□□□□ -0.41
DDX39B-202ENST00000396172 ZPR1O75312 459 aa12.48□□□□□ -0.41
DDX39B-202ENST00000396172 MVPQ14764 893 aaKnown RBP12.48□□□□□ -0.41
DDX39B-202ENST00000396172 INTS3Q68E01 1043 aaKnown RBP12.48□□□□□ -0.41
DDX39B-202ENST00000396172 SLC4A10Q6U841 1118 aa12.48□□□□□ -0.41
DDX39B-202ENST00000396172 TTLL7Q6ZT98 887 aa12.48□□□□□ -0.41
DDX39B-202ENST00000396172 DEFB132Q7Z7B7 95 aa12.48□□□□□ -0.41
DDX39B-202ENST00000396172 ARXQ96QS3 562 aa12.48□□□□□ -0.41
DDX39B-202ENST00000396172 METTL22Q9BUU2 404 aaPredicted RBP12.48□□□□□ -0.41
DDX39B-202ENST00000396172 SRCIN1Q9C0H9 1055 aa12.48□□□□□ -0.41
DDX39B-202ENST00000396172 TFCP2L1Q9NZI6 479 aa12.48□□□□□ -0.41
DDX39B-202ENST00000396172 ALDH1L1O75891 902 aa12.47□□□□□ -0.41
DDX39B-202ENST00000396172 RFC4P35249 363 aa12.47□□□□□ -0.41
DDX39B-202ENST00000396172 CLEC4GQ6UXB4 293 aa12.47□□□□□ -0.41
DDX39B-202ENST00000396172 GIGYF2Q6Y7W6 1299 aaKnown RBP12.47□□□□□ -0.41
DDX39B-202ENST00000396172 ITPRIPQ8IWB1 547 aa12.47□□□□□ -0.41
DDX39B-202ENST00000396172 LINS1Q8NG48 757 aa12.47□□□□□ -0.41
DDX39B-202ENST00000396172 ZBTB3Q9H5J0 574 aa12.47□□□□□ -0.41
DDX39B-202ENST00000396172 NARFQ9UHQ1 456 aa12.47□□□□□ -0.41
DDX39B-202ENST00000396172 F6X3S4 739 aa12.47□□□□□ -0.41
DDX39B-202ENST00000396172 ERICH6BQ5W0A0 696 aa12.47□□□□□ -0.41
DDX39B-202ENST00000396172 TMEM57Q8N5G2 664 aa12.47□□□□□ -0.41
DDX39B-202ENST00000396172 PANK1Q8TE04 598 aa12.47□□□□□ -0.41
DDX39B-202ENST00000396172 USP42Q9H9J4 1324 aaKnown RBP12.47□□□□□ -0.41
DDX39B-202ENST00000396172 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.46□□□□□ -0.41
DDX39B-202ENST00000396172 TBC1D2BQ9UPU7 963 aa12.46□□□□□ -0.41
DDX39B-202ENST00000396172 PHF14O94880 888 aa12.46□□□□□ -0.42
DDX39B-202ENST00000396172 CAMTA2O94983 1202 aa12.46□□□□□ -0.42
DDX39B-202ENST00000396172 RLBP1P12271 317 aa12.46□□□□□ -0.42
DDX39B-202ENST00000396172 SLC15A2Q16348 729 aa12.46□□□□□ -0.42
DDX39B-202ENST00000396172 ZNF827Q17R98 1081 aa12.46□□□□□ -0.42
DDX39B-202ENST00000396172 MYD88Q99836 296 aa12.46□□□□□ -0.42
DDX39B-202ENST00000396172 HDAC5Q9UQL6 1122 aa12.46□□□□□ -0.42
DDX39B-202ENST00000396172 BEND3Q5T5X7 828 aa12.45□□□□□ -0.42
DDX39B-202ENST00000396172 C20orf194Q5TEA3 1177 aa12.45□□□□□ -0.42
DDX39B-202ENST00000396172 ARHGEF1Q92888 912 aaKnown RBP12.45□□□□□ -0.42
DDX39B-202ENST00000396172 COG6Q9Y2V7 657 aa12.45□□□□□ -0.42
DDX39B-202ENST00000396172 DDX60Q8IY21 1712 aaKnown RBP12.45□□□□□ -0.42
DDX39B-202ENST00000396172 TCIRG1Q13488 830 aa12.44□□□□□ -0.42
DDX39B-202ENST00000396172 CCDC191Q8NCU4 936 aa12.44□□□□□ -0.42
DDX39B-202ENST00000396172 TNNQ9UQP3 1299 aa12.44□□□□□ -0.42
DDX39B-202ENST00000396172 NRXN2Q9P2S2 1712 aa12.44□□□□□ -0.42
DDX39B-202ENST00000396172 GNAI3P08754 354 aa12.44□□□□□ -0.42
DDX39B-202ENST00000396172 TRIM28Q13263 835 aaKnown RBP12.44□□□□□ -0.42
DDX39B-202ENST00000396172 PARP10Q53GL7 1025 aa12.44□□□□□ -0.42
DDX39B-202ENST00000396172 CRBNQ96SW2 442 aa12.44□□□□□ -0.42
DDX39B-202ENST00000396172 CWC25Q9NXE8 425 aaPredicted RBP12.43□□□□□ -0.42
DDX39B-202ENST00000396172 RBM19Q9Y4C8 960 aaKnown RBP12.43□□□□□ -0.42
DDX39B-202ENST00000396172 NEURL1BA8MQ27 555 aa12.43□□□□□ -0.42
DDX39B-202ENST00000396172 USPL1Q5W0Q7 1092 aa12.43□□□□□ -0.42
DDX39B-202ENST00000396172 ILDR2Q71H61 639 aa12.43□□□□□ -0.42
DDX39B-202ENST00000396172 ISCA1Q9BUE6 129 aa12.43□□□□□ -0.42
DDX39B-202ENST00000396172 ANO8Q9HCE9 1232 aaPredicted RBP12.43□□□□□ -0.42
DDX39B-202ENST00000396172 PNPLA7Q6ZV29 1317 aa12.42□□□□□ -0.42
DDX39B-202ENST00000396172 IRX6P78412 446 aaPredicted RBP12.42□□□□□ -0.42
DDX39B-202ENST00000396172 C9orf78Q9NZ63 289 aaPredicted RBP12.42□□□□□ -0.42
DDX39B-202ENST00000396172 CARMIL3Q8ND23 1372 aa12.42□□□□□ -0.42
DDX39B-202ENST00000396172 MSH5O43196 834 aa12.41□□□□□ -0.42
DDX39B-202ENST00000396172 IGKV5-2P06315 115 aa12.41□□□□□ -0.42
DDX39B-202ENST00000396172 HSP90B1P14625 803 aaKnown RBP12.41□□□□□ -0.42
DDX39B-202ENST00000396172 HLFQ16534 295 aa12.41□□□□□ -0.42
DDX39B-202ENST00000396172 PPP1R42Q7Z4L9 355 aa12.41□□□□□ -0.42
DDX39B-202ENST00000396172 GRM8O00222 908 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms