RNA–Protein interactions for RNA: ENST00000377399.2

SPSB1-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-203ENST00000377399 COL15A1P39059 1388 aa24.42■■□□□ 1.5
SPSB1-203ENST00000377399 RPS6KA4O75676 772 aa24.41■■□□□ 1.5
SPSB1-203ENST00000377399 ATF7IPQ6VMQ6 1270 aa24.41■■□□□ 1.5
SPSB1-203ENST00000377399 LRP10Q7Z4F1 713 aa24.41■■□□□ 1.5
SPSB1-203ENST00000377399 A0A087WZG4 1122 aa24.4■■□□□ 1.5
SPSB1-203ENST00000377399 PLIN1O60240 522 aa24.4■■□□□ 1.5
SPSB1-203ENST00000377399 MS4A1P11836 297 aa24.4■■□□□ 1.5
SPSB1-203ENST00000377399 EIF5P55010 431 aaKnown RBP24.4■■□□□ 1.5
SPSB1-203ENST00000377399 FTSJ3Q8IY81 847 aaKnown RBP24.4■■□□□ 1.5
SPSB1-203ENST00000377399 UBR3Q6ZT12 1888 aa24.38■■□□□ 1.49
SPSB1-203ENST00000377399 RNF123Q5XPI4 1314 aa24.38■■□□□ 1.49
SPSB1-203ENST00000377399 TRIM27P14373 513 aa24.38■■□□□ 1.49
SPSB1-203ENST00000377399 TFCP2L1Q9NZI6 479 aa24.38■■□□□ 1.49
SPSB1-203ENST00000377399 PHF14O94880 888 aa24.37■■□□□ 1.49
SPSB1-203ENST00000377399 ADRA2BP18089 450 aa24.37■■□□□ 1.49
SPSB1-203ENST00000377399 RIC3Q7Z5B4 369 aa24.37■■□□□ 1.49
SPSB1-203ENST00000377399 DZIP3Q86Y13 1208 aaKnown RBP24.37■■□□□ 1.49
SPSB1-203ENST00000377399 SSFA2P28290 1259 aa24.36■■□□□ 1.49
SPSB1-203ENST00000377399 POLD1P28340 1107 aa24.36■■□□□ 1.49
SPSB1-203ENST00000377399 KSR2Q6VAB6 950 aa24.36■■□□□ 1.49
SPSB1-203ENST00000377399 TTLL7Q6ZT98 887 aa24.36■■□□□ 1.49
SPSB1-203ENST00000377399 ANKRD13DQ6ZTN6 518 aa24.36■■□□□ 1.49
SPSB1-203ENST00000377399 QSER1Q2KHR3 1735 aa24.35■■□□□ 1.49
SPSB1-203ENST00000377399 PI4KAP2A4QPH2 592 aa24.35■■□□□ 1.49
SPSB1-203ENST00000377399 DZIP1LQ8IYY4 767 aaKnown RBP24.35■■□□□ 1.49
SPSB1-203ENST00000377399 PI4KAP1Q8N8J0 262 aa24.35■■□□□ 1.49
SPSB1-203ENST00000377399 PLBD2Q8NHP8 589 aa24.35■■□□□ 1.49
SPSB1-203ENST00000377399 CLUAP1Q96AJ1 413 aa24.35■■□□□ 1.49
SPSB1-203ENST00000377399 MAP3K15Q6ZN16 1313 aa24.35■■□□□ 1.49
SPSB1-203ENST00000377399 PNPLA7Q6ZV29 1317 aa24.35■■□□□ 1.49
SPSB1-203ENST00000377399 ARFGEF2Q9Y6D5 1785 aa24.34■■□□□ 1.49
SPSB1-203ENST00000377399 PXDNLA1KZ92 1463 aa24.34■■□□□ 1.49
SPSB1-203ENST00000377399 ADCY9O60503 1353 aa24.34■■□□□ 1.49
SPSB1-203ENST00000377399 TRAPPC3LQ5T215 181 aa24.34■■□□□ 1.49
SPSB1-203ENST00000377399 DNAAF4Q8WXU2 420 aa24.34■■□□□ 1.49
SPSB1-203ENST00000377399 ZBTB3Q9H5J0 574 aa24.34■■□□□ 1.49
SPSB1-203ENST00000377399 TBC1D2BQ9UPU7 963 aa24.34■■□□□ 1.49
SPSB1-203ENST00000377399 MAP3K2Q9Y2U5 619 aa24.34■■□□□ 1.49
SPSB1-203ENST00000377399 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.33■■□□□ 1.49
SPSB1-203ENST00000377399 F6X3S4 739 aa24.33■■□□□ 1.49
SPSB1-203ENST00000377399 NEFLP07196 543 aa24.33■■□□□ 1.49
SPSB1-203ENST00000377399 PDE3AQ14432 1141 aa24.33■■□□□ 1.49
SPSB1-203ENST00000377399 SLC4A10Q6U841 1118 aa24.33■■□□□ 1.49
SPSB1-203ENST00000377399 ABCC4O15439 1325 aa24.33■■□□□ 1.48
SPSB1-203ENST00000377399 RFC4P35249 363 aa24.32■■□□□ 1.48
SPSB1-203ENST00000377399 FLAD1Q8NFF5 587 aa24.32■■□□□ 1.48
SPSB1-203ENST00000377399 TNNQ9UQP3 1299 aa24.32■■□□□ 1.48
SPSB1-203ENST00000377399 TUBGCP6Q96RT7 1819 aa24.32■■□□□ 1.48
SPSB1-203ENST00000377399 C4AP0C0L4 1744 aa24.32■■□□□ 1.48
SPSB1-203ENST00000377399 BCORQ6W2J9 1755 aa24.31■■□□□ 1.48
SPSB1-203ENST00000377399 SCN7AQ01118 1682 aa24.31■■□□□ 1.48
SPSB1-203ENST00000377399 ERVV-1B6SEH8 477 aa24.31■■□□□ 1.48
SPSB1-203ENST00000377399 ZPR1O75312 459 aa24.31■■□□□ 1.48
SPSB1-203ENST00000377399 NEXNQ0ZGT2 675 aa24.31■■□□□ 1.48
SPSB1-203ENST00000377399 ZNF784Q8NCA9 323 aaPredicted RBP24.31■■□□□ 1.48
SPSB1-203ENST00000377399 ZNF652Q9Y2D9 606 aa24.31■■□□□ 1.48
SPSB1-203ENST00000377399 PANK1Q8TE04 598 aa24.3■■□□□ 1.48
SPSB1-203ENST00000377399 ARHGEF1Q92888 912 aaKnown RBP24.3■■□□□ 1.48
SPSB1-203ENST00000377399 CAMTA2O94983 1202 aa24.29■■□□□ 1.48
SPSB1-203ENST00000377399 GPR162Q16538 588 aa24.29■■□□□ 1.48
SPSB1-203ENST00000377399 HSP90AB3PQ58FF7 597 aa24.29■■□□□ 1.48
SPSB1-203ENST00000377399 SMIM5Q71RC9 77 aa24.29■■□□□ 1.48
SPSB1-203ENST00000377399 AMIGO3Q86WK7 504 aa24.29■■□□□ 1.48
SPSB1-203ENST00000377399 METTL22Q9BUU2 404 aaPredicted RBP24.29■■□□□ 1.48
SPSB1-203ENST00000377399 NARFQ9UHQ1 456 aa24.29■■□□□ 1.48
SPSB1-203ENST00000377399 UTRNP46939 3433 aa24.29■■□□□ 1.48
SPSB1-203ENST00000377399 N4BP2Q86UW6 1770 aaPredicted RBP24.29■■□□□ 1.48
SPSB1-203ENST00000377399 CCT4P50991 539 aaKnown RBP24.28■■□□□ 1.48
SPSB1-203ENST00000377399 C20orf194Q5TEA3 1177 aa24.28■■□□□ 1.48
SPSB1-203ENST00000377399 MYD88Q99836 296 aa24.28■■□□□ 1.48
SPSB1-203ENST00000377399 USP42Q9H9J4 1324 aaKnown RBP24.28■■□□□ 1.48
SPSB1-203ENST00000377399 ATP10DQ9P241 1426 aa24.27■■□□□ 1.48
SPSB1-203ENST00000377399 MSH5O43196 834 aa24.27■■□□□ 1.48
SPSB1-203ENST00000377399 RLBP1P12271 317 aa24.27■■□□□ 1.48
SPSB1-203ENST00000377399 GIGYF2Q6Y7W6 1299 aaKnown RBP24.27■■□□□ 1.48
SPSB1-203ENST00000377399 ITPRIPQ8IWB1 547 aa24.27■■□□□ 1.48
SPSB1-203ENST00000377399 KLHL34Q8N239 644 aa24.27■■□□□ 1.48
SPSB1-203ENST00000377399 TMEM57Q8N5G2 664 aa24.27■■□□□ 1.48
SPSB1-203ENST00000377399 CHD4Q14839 1912 aa24.27■■□□□ 1.48
SPSB1-203ENST00000377399 RGL2O15211 777 aa24.26■■□□□ 1.47
SPSB1-203ENST00000377399 SRCIN1Q9C0H9 1055 aa24.26■■□□□ 1.47
SPSB1-203ENST00000377399 COL24A1Q17RW2 1714 aa24.26■■□□□ 1.47
SPSB1-203ENST00000377399 ANKRD36CQ5JPF3 1778 aa24.26■■□□□ 1.47
SPSB1-203ENST00000377399 NUP98P52948 1817 aa24.26■■□□□ 1.47
SPSB1-203ENST00000377399 IRX6P78412 446 aaPredicted RBP24.25■■□□□ 1.47
SPSB1-203ENST00000377399 USPL1Q5W0Q7 1092 aa24.25■■□□□ 1.47
SPSB1-203ENST00000377399 SRP68Q9UHB9 627 aaKnown RBP24.25■■□□□ 1.47
SPSB1-203ENST00000377399 TCIRG1Q13488 830 aa24.24■■□□□ 1.47
SPSB1-203ENST00000377399 HLFQ16534 295 aa24.24■■□□□ 1.47
SPSB1-203ENST00000377399 INTS3Q68E01 1043 aaKnown RBP24.24■■□□□ 1.47
SPSB1-203ENST00000377399 CLEC4GQ6UXB4 293 aa24.24■■□□□ 1.47
SPSB1-203ENST00000377399 LINS1Q8NG48 757 aa24.24■■□□□ 1.47
SPSB1-203ENST00000377399 COG6Q9Y2V7 657 aa24.24■■□□□ 1.47
SPSB1-203ENST00000377399 AFDNP55196 1824 aaKnown RBP24.24■■□□□ 1.47
SPSB1-203ENST00000377399 ALDH1L1O75891 902 aa24.23■■□□□ 1.47
SPSB1-203ENST00000377399 MVPQ14764 893 aaKnown RBP24.23■■□□□ 1.47
SPSB1-203ENST00000377399 BEND3Q5T5X7 828 aa24.23■■□□□ 1.47
SPSB1-203ENST00000377399 COL23A1Q86Y22 540 aaPredicted RBP24.22■■□□□ 1.47
SPSB1-203ENST00000377399 ATP5J2-PTCD1G3V325 749 aa24.21■■□□□ 1.47
SPSB1-203ENST00000377399 CRBNQ96SW2 442 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms