RNA–Protein interactions for RNA: ENST00000371561.7

GRIN1-208, Transcript of glutamate ionotropic receptor NMDA type subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GRIN1, Length 5,149 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN1-208ENST00000371561 ORC3Q9UBD5 711 aaPredicted RBP23.53■■□□□ 1.36
GRIN1-208ENST00000371561 CEP135Q66GS9 1140 aa23.53■■□□□ 1.36
GRIN1-208ENST00000371561 NAA15Q9BXJ9 866 aaKnown RBP23.53■■□□□ 1.36
GRIN1-208ENST00000371561 IARSP41252 1262 aaKnown RBP23.53■■□□□ 1.36
GRIN1-208ENST00000371561 TMEM266Q2M3C6 531 aa23.53■■□□□ 1.36
GRIN1-208ENST00000371561 CCDC150Q8NCX0 1101 aa23.53■■□□□ 1.36
GRIN1-208ENST00000371561 TMX3Q96JJ7 454 aa23.53■■□□□ 1.36
GRIN1-208ENST00000371561 UBA5Q9GZZ9 404 aa23.53■■□□□ 1.36
GRIN1-208ENST00000371561 CLCN1P35523 988 aa23.53■■□□□ 1.36
GRIN1-208ENST00000371561 MTIF2P46199 727 aaKnown RBP23.53■■□□□ 1.36
GRIN1-208ENST00000371561 NLRP5P59047 1200 aa23.52■■□□□ 1.36
GRIN1-208ENST00000371561 SMC1AQ14683 1233 aaKnown RBP23.52■■□□□ 1.36
GRIN1-208ENST00000371561 A0A087WZG4 1122 aa23.52■■□□□ 1.36
GRIN1-208ENST00000371561 PRKCSHP14314 528 aaPredicted RBP23.52■■□□□ 1.36
GRIN1-208ENST00000371561 GNG11P61952 73 aa23.52■■□□□ 1.36
GRIN1-208ENST00000371561 HLTFQ14527 1009 aaKnown RBP eCLIP23.52■■□□□ 1.36
GRIN1-208ENST00000371561 RNF187Q5TA31 235 aaPredicted RBP23.52■■□□□ 1.36
GRIN1-208ENST00000371561 GIMAP6Q6P9H5 292 aa23.52■■□□□ 1.36
GRIN1-208ENST00000371561 MPHOSPH10O00566 681 aaKnown RBP23.52■■□□□ 1.36
GRIN1-208ENST00000371561 CCDC102BQ68D86 513 aa23.52■■□□□ 1.36
GRIN1-208ENST00000371561 NEK1Q96PY6 1258 aa23.52■■□□□ 1.36
GRIN1-208ENST00000371561 ALS2CR12Q96Q35 445 aa23.51■■□□□ 1.35
GRIN1-208ENST00000371561 HDAC1Q13547 482 aaPredicted RBP23.51■■□□□ 1.35
GRIN1-208ENST00000371561 HMG20BQ9P0W2 317 aa23.51■■□□□ 1.35
GRIN1-208ENST00000371561 SPDYE4A6NLX3 237 aa23.51■■□□□ 1.35
GRIN1-208ENST00000371561 ZSCAN22P10073 491 aaPredicted RBP23.5■■□□□ 1.35
GRIN1-208ENST00000371561 BCCIPQ9P287 314 aaKnown RBP eCLIP23.5■■□□□ 1.35
GRIN1-208ENST00000371561 USHBP1Q8N6Y0 703 aa23.5■■□□□ 1.35
GRIN1-208ENST00000371561 PANK2Q9BZ23 570 aa23.5■■□□□ 1.35
GRIN1-208ENST00000371561 ZSCAN16Q9H4T2 348 aaPredicted RBP23.5■■□□□ 1.35
GRIN1-208ENST00000371561 GOPCQ9HD26 462 aa23.5■■□□□ 1.35
GRIN1-208ENST00000371561 XRCC6P12956 609 aaKnown RBP eCLIP23.5■■□□□ 1.35
GRIN1-208ENST00000371561 IBSPP21815 317 aaPredicted RBP23.5■■□□□ 1.35
GRIN1-208ENST00000371561 GCOM1H8Y6P7 765 aaPredicted RBP23.49■■□□□ 1.35
GRIN1-208ENST00000371561 MYZAPP0CAP1 466 aa23.49■■□□□ 1.35
GRIN1-208ENST00000371561 TNIP1Q15025 636 aa23.49■■□□□ 1.35
GRIN1-208ENST00000371561 CTR9Q6PD62 1173 aa23.49■■□□□ 1.35
GRIN1-208ENST00000371561 PPP1R42Q7Z4L9 355 aa23.49■■□□□ 1.35
GRIN1-208ENST00000371561 CATIPQ7Z7H3 387 aa23.49■■□□□ 1.35
GRIN1-208ENST00000371561 TSHZ3Q63HK5 1081 aa23.49■■□□□ 1.35
GRIN1-208ENST00000371561 MPRIPQ6WCQ1 1025 aa23.49■■□□□ 1.35
GRIN1-208ENST00000371561 ZNF444Q8N0Y2 327 aaPredicted RBP23.49■■□□□ 1.35
GRIN1-208ENST00000371561 CCDC12Q8WUD4 166 aaPredicted RBP23.49■■□□□ 1.35
GRIN1-208ENST00000371561 GOLIM4O00461 696 aa23.49■■□□□ 1.35
GRIN1-208ENST00000371561 CCDC175P0C221 793 aa23.49■■□□□ 1.35
GRIN1-208ENST00000371561 NUCB1Q02818 461 aa23.49■■□□□ 1.35
GRIN1-208ENST00000371561 KANK3Q6NY19 840 aa23.49■■□□□ 1.35
GRIN1-208ENST00000371561 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.49■■□□□ 1.35
GRIN1-208ENST00000371561 TMOD2Q9NZR1 351 aa23.49■■□□□ 1.35
GRIN1-208ENST00000371561 ZNF652Q9Y2D9 606 aa23.49■■□□□ 1.35
GRIN1-208ENST00000371561 CCDC171Q6TFL3 1326 aa23.49■■□□□ 1.35
GRIN1-208ENST00000371561 NEBLO76041 1014 aa23.48■■□□□ 1.35
GRIN1-208ENST00000371561 SLC5A1P13866 664 aa23.48■■□□□ 1.35
GRIN1-208ENST00000371561 IL16Q14005 1332 aa23.48■■□□□ 1.35
GRIN1-208ENST00000371561 LMAN1P49257 510 aa23.48■■□□□ 1.35
GRIN1-208ENST00000371561 ZHX1Q9UKY1 873 aaPredicted RBP23.48■■□□□ 1.35
GRIN1-208ENST00000371561 DZIP1Q86YF9 867 aaKnown RBP23.48■■□□□ 1.35
GRIN1-208ENST00000371561 EPRSP07814 1512 aaKnown RBP23.48■■□□□ 1.35
GRIN1-208ENST00000371561 ISM2Q6H9L7 571 aa23.47■■□□□ 1.35
GRIN1-208ENST00000371561 ZSWIM4Q9H7M6 989 aa23.47■■□□□ 1.35
GRIN1-208ENST00000371561 TCP11L1Q9NUJ3 509 aa23.47■■□□□ 1.35
GRIN1-208ENST00000371561 TMOD3Q9NYL9 352 aa23.47■■□□□ 1.35
GRIN1-208ENST00000371561 IDEP14735 1019 aa23.47■■□□□ 1.35
GRIN1-208ENST00000371561 MBIPQ9NS73 344 aa23.47■■□□□ 1.35
GRIN1-208ENST00000371561 NOLC1Q14978 699 aaKnown RBP eCLIP23.47■■□□□ 1.35
GRIN1-208ENST00000371561 SDSP20132 328 aa23.46■■□□□ 1.35
GRIN1-208ENST00000371561 MICU3Q86XE3 530 aa23.46■■□□□ 1.35
GRIN1-208ENST00000371561 TMEM67Q5HYA8 995 aa23.46■■□□□ 1.35
GRIN1-208ENST00000371561 CRACR2BQ8N4Y2 399 aaPredicted RBP23.46■■□□□ 1.35
GRIN1-208ENST00000371561 PYM1Q9BRP8 204 aaKnown RBP23.46■■□□□ 1.35
GRIN1-208ENST00000371561 UBA7P41226 1012 aa23.46■■□□□ 1.35
GRIN1-208ENST00000371561 MACROD2A1Z1Q3 448 aa23.46■■□□□ 1.35
GRIN1-208ENST00000371561 TMCO5BA8MYB1 307 aa23.46■■□□□ 1.35
GRIN1-208ENST00000371561 AMPD3Q01432 767 aa23.46■■□□□ 1.35
GRIN1-208ENST00000371561 FAM200AQ8TCP9 573 aa23.46■■□□□ 1.35
GRIN1-208ENST00000371561 TAOK3Q9H2K8 898 aa23.46■■□□□ 1.35
GRIN1-208ENST00000371561 TRMT112Q9UI30 125 aaKnown RBP23.46■■□□□ 1.35
GRIN1-208ENST00000371561 CTNNBL1Q8WYA6 563 aaPredicted RBP23.45■■□□□ 1.34
GRIN1-208ENST00000371561 ARHGAP45Q92619 1136 aa23.45■■□□□ 1.34
GRIN1-208ENST00000371561 ANKRD18BA2A2Z9 1011 aa23.45■■□□□ 1.34
GRIN1-208ENST00000371561 NUTM2BA6NNL0 878 aaPredicted RBP23.45■■□□□ 1.34
GRIN1-208ENST00000371561 NUTM2EB1AL46 878 aaPredicted RBP23.45■■□□□ 1.34
GRIN1-208ENST00000371561 NUTM2AQ8IVF1 878 aaPredicted RBP23.45■■□□□ 1.34
GRIN1-208ENST00000371561 KRT222Q8N1A0 295 aa23.45■■□□□ 1.34
GRIN1-208ENST00000371561 PCDHB15Q9Y5E8 787 aa23.45■■□□□ 1.34
GRIN1-208ENST00000371561 NSD2O96028 1365 aa23.45■■□□□ 1.34
GRIN1-208ENST00000371561 CDK13Q14004 1512 aaKnown RBP23.45■■□□□ 1.34
GRIN1-208ENST00000371561 CCDC40Q4G0X9 1142 aa23.45■■□□□ 1.34
GRIN1-208ENST00000371561 HAND2P61296 217 aa23.44■■□□□ 1.34
GRIN1-208ENST00000371561 HOOK3Q86VS8 718 aa23.44■■□□□ 1.34
GRIN1-208ENST00000371561 ADGRF5Q8IZF2 1346 aa23.44■■□□□ 1.34
GRIN1-208ENST00000371561 N4BP3O15049 544 aa23.44■■□□□ 1.34
GRIN1-208ENST00000371561 METAP2P50579 478 aaKnown RBP eCLIP23.44■■□□□ 1.34
GRIN1-208ENST00000371561 ZNF830Q96NB3 372 aaPredicted RBP23.44■■□□□ 1.34
GRIN1-208ENST00000371561 SKILP12757 684 aa23.44■■□□□ 1.34
GRIN1-208ENST00000371561 CCDC186Q7Z3E2 898 aa23.44■■□□□ 1.34
GRIN1-208ENST00000371561 BRF1Q92994 677 aa23.44■■□□□ 1.34
GRIN1-208ENST00000371561 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.44■■□□□ 1.34
GRIN1-208ENST00000371561 MAP3K2Q9Y2U5 619 aa23.44■■□□□ 1.34
GRIN1-208ENST00000371561 FAM114A1Q8IWE2 563 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms