RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 CASZ1Q86V15 1759 aa19.46■□□□□ 0.71
TPM1-206ENST00000358278 ZPR1O75312 459 aa19.45■□□□□ 0.7
TPM1-206ENST00000358278 DDX58O95786 925 aaKnown RBP19.45■□□□□ 0.7
TPM1-206ENST00000358278 BRPF1P55201 1214 aaPredicted RBP19.45■□□□□ 0.7
TPM1-206ENST00000358278 R3HDM1Q15032 1099 aaKnown RBP19.45■□□□□ 0.7
TPM1-206ENST00000358278 COL23A1Q86Y22 540 aaPredicted RBP19.45■□□□□ 0.7
TPM1-206ENST00000358278 CENPBP07199 599 aaPredicted RBP19.44■□□□□ 0.7
TPM1-206ENST00000358278 ZBTB3Q9H5J0 574 aa19.44■□□□□ 0.7
TPM1-206ENST00000358278 NARFQ9UHQ1 456 aa19.44■□□□□ 0.7
TPM1-206ENST00000358278 MAP3K15Q6ZN16 1313 aa19.44■□□□□ 0.7
TPM1-206ENST00000358278 N4BP2Q86UW6 1770 aaPredicted RBP19.44■□□□□ 0.7
TPM1-206ENST00000358278 FRAT1Q92837 279 aaPredicted RBP19.43■□□□□ 0.7
TPM1-206ENST00000358278 SRP68Q9UHB9 627 aaKnown RBP19.43■□□□□ 0.7
TPM1-206ENST00000358278 PTPRCP08575 1304 aa19.43■□□□□ 0.7
TPM1-206ENST00000358278 USP42Q9H9J4 1324 aaKnown RBP19.43■□□□□ 0.7
TPM1-206ENST00000358278 ANKRD13DQ6ZTN6 518 aa19.42■□□□□ 0.7
TPM1-206ENST00000358278 RIC3Q7Z5B4 369 aa19.42■□□□□ 0.7
TPM1-206ENST00000358278 PLBD2Q8NHP8 589 aa19.42■□□□□ 0.7
TPM1-206ENST00000358278 NOB1Q9ULX3 412 aaKnown RBP19.42■□□□□ 0.7
TPM1-206ENST00000358278 PSDA5PKW4 1024 aaPredicted RBP19.42■□□□□ 0.7
TPM1-206ENST00000358278 USPL1Q5W0Q7 1092 aa19.42■□□□□ 0.7
TPM1-206ENST00000358278 PI4KAP2A4QPH2 592 aa19.41■□□□□ 0.7
TPM1-206ENST00000358278 CAMTA2O94983 1202 aa19.41■□□□□ 0.7
TPM1-206ENST00000358278 PI4KAP1Q8N8J0 262 aa19.41■□□□□ 0.7
TPM1-206ENST00000358278 ZNF652Q9Y2D9 606 aa19.41■□□□□ 0.7
TPM1-206ENST00000358278 ADCY9O60503 1353 aa19.4■□□□□ 0.7
TPM1-206ENST00000358278 ERVV-1B6SEH8 477 aa19.4■□□□□ 0.7
TPM1-206ENST00000358278 IPO8O15397 1037 aaKnown RBP19.4■□□□□ 0.7
TPM1-206ENST00000358278 KSR2Q6VAB6 950 aa19.4■□□□□ 0.7
TPM1-206ENST00000358278 MAP3K2Q9Y2U5 619 aa19.39■□□□□ 0.7
TPM1-206ENST00000358278 PDGFDQ9GZP0 370 aaPredicted RBP19.39■□□□□ 0.69
TPM1-206ENST00000358278 F6X3S4 739 aa19.38■□□□□ 0.69
TPM1-206ENST00000358278 GYS1P13807 737 aa19.38■□□□□ 0.69
TPM1-206ENST00000358278 HLFQ16534 295 aa19.38■□□□□ 0.69
TPM1-206ENST00000358278 ZKSCAN2Q63HK3 967 aa19.38■□□□□ 0.69
TPM1-206ENST00000358278 GIGYF2Q6Y7W6 1299 aaKnown RBP19.38■□□□□ 0.69
TPM1-206ENST00000358278 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.38■□□□□ 0.69
TPM1-206ENST00000358278 API5Q9BZZ5 524 aaKnown RBP19.38■□□□□ 0.69
TPM1-206ENST00000358278 CLEC4GQ6UXB4 293 aa19.37■□□□□ 0.69
TPM1-206ENST00000358278 DNAAF4Q8WXU2 420 aa19.37■□□□□ 0.69
TPM1-206ENST00000358278 ARHGAP45Q92619 1136 aa19.37■□□□□ 0.69
TPM1-206ENST00000358278 COL24A1Q17RW2 1714 aa19.37■□□□□ 0.69
TPM1-206ENST00000358278 PXDNLA1KZ92 1463 aa19.37■□□□□ 0.69
TPM1-206ENST00000358278 RGL2O15211 777 aa19.37■□□□□ 0.69
TPM1-206ENST00000358278 NEXNQ0ZGT2 675 aa19.37■□□□□ 0.69
TPM1-206ENST00000358278 HSP90AB3PQ58FF7 597 aa19.37■□□□□ 0.69
TPM1-206ENST00000358278 SLC4A10Q6U841 1118 aa19.37■□□□□ 0.69
TPM1-206ENST00000358278 ATF7IPQ6VMQ6 1270 aa19.37■□□□□ 0.69
TPM1-206ENST00000358278 TRIM27P14373 513 aa19.36■□□□□ 0.69
TPM1-206ENST00000358278 FKBP8Q14318 412 aa19.36■□□□□ 0.69
TPM1-206ENST00000358278 MSL1Q68DK7 614 aa19.36■□□□□ 0.69
TPM1-206ENST00000358278 SLC16A10Q8TF71 515 aa19.36■□□□□ 0.69
TPM1-206ENST00000358278 BCL2L12Q9HB09 334 aa19.36■□□□□ 0.69
TPM1-206ENST00000358278 ATP10DQ9P241 1426 aa19.36■□□□□ 0.69
TPM1-206ENST00000358278 MYD88Q99836 296 aa19.35■□□□□ 0.69
TPM1-206ENST00000358278 METTL22Q9BUU2 404 aaPredicted RBP19.35■□□□□ 0.69
TPM1-206ENST00000358278 PLIN1O60240 522 aa19.34■□□□□ 0.69
TPM1-206ENST00000358278 BICDL1Q6ZP65 573 aa19.34■□□□□ 0.69
TPM1-206ENST00000358278 FTSJ3Q8IY81 847 aaKnown RBP19.34■□□□□ 0.69
TPM1-206ENST00000358278 NLGN1Q8N2Q7 840 aa19.34■□□□□ 0.69
TPM1-206ENST00000358278 CLUAP1Q96AJ1 413 aa19.34■□□□□ 0.69
TPM1-206ENST00000358278 GPTP24298 496 aa19.34■□□□□ 0.69
TPM1-206ENST00000358278 TCIRG1Q13488 830 aa19.34■□□□□ 0.69
TPM1-206ENST00000358278 TBC1D9BQ66K14 1250 aa19.34■□□□□ 0.69
TPM1-206ENST00000358278 NIP7Q9Y221 180 aaKnown RBP eCLIP19.34■□□□□ 0.69
TPM1-206ENST00000358278 ATP5J2-PTCD1G3V325 749 aa19.33■□□□□ 0.68
TPM1-206ENST00000358278 ZBTB7AO95365 584 aa19.33■□□□□ 0.68
TPM1-206ENST00000358278 RRP1P56182 461 aaKnown RBP19.32■□□□□ 0.68
TPM1-206ENST00000358278 SETDB2Q96T68 719 aa19.32■□□□□ 0.68
TPM1-206ENST00000358278 TNNQ9UQP3 1299 aa19.32■□□□□ 0.68
TPM1-206ENST00000358278 ABCC4O15439 1325 aa19.32■□□□□ 0.68
TPM1-206ENST00000358278 MTFR1LQ9H019 292 aa19.31■□□□□ 0.68
TPM1-206ENST00000358278 SUPT16HQ9Y5B9 1047 aaKnown RBP19.31■□□□□ 0.68
TPM1-206ENST00000358278 CARMIL3Q8ND23 1372 aa19.31■□□□□ 0.68
TPM1-206ENST00000358278 MS4A1P11836 297 aa19.31■□□□□ 0.68
TPM1-206ENST00000358278 NFIXQ14938 502 aa19.31■□□□□ 0.68
TPM1-206ENST00000358278 DZIP1LQ8IYY4 767 aaKnown RBP19.31■□□□□ 0.68
TPM1-206ENST00000358278 ZNF34Q8IZ26 560 aa19.31■□□□□ 0.68
TPM1-206ENST00000358278 CWF19L2Q2TBE0 894 aaKnown RBP19.3■□□□□ 0.68
TPM1-206ENST00000358278 LINS1Q8NG48 757 aa19.3■□□□□ 0.68
TPM1-206ENST00000358278 ISCA1Q9BUE6 129 aa19.3■□□□□ 0.68
TPM1-206ENST00000358278 SRCIN1Q9C0H9 1055 aa19.3■□□□□ 0.68
TPM1-206ENST00000358278 MYH3P11055 1940 aa19.3■□□□□ 0.68
TPM1-206ENST00000358278 UBN2Q6ZU65 1347 aa19.3■□□□□ 0.68
TPM1-206ENST00000358278 IGKV5-2P06315 115 aa19.29■□□□□ 0.68
TPM1-206ENST00000358278 MMP10P09238 476 aa19.29■□□□□ 0.68
TPM1-206ENST00000358278 PARP10Q53GL7 1025 aa19.29■□□□□ 0.68
TPM1-206ENST00000358278 BEND3Q5T5X7 828 aa19.29■□□□□ 0.68
TPM1-206ENST00000358278 NRXN2Q9P2S2 1712 aa19.29■□□□□ 0.68
TPM1-206ENST00000358278 FAM177BA6PVY3 158 aa19.28■□□□□ 0.68
TPM1-206ENST00000358278 NEURL1BA8MQ27 555 aa19.28■□□□□ 0.68
TPM1-206ENST00000358278 CCT4P50991 539 aaKnown RBP19.28■□□□□ 0.68
TPM1-206ENST00000358278 CCDC191Q8NCU4 936 aa19.28■□□□□ 0.68
TPM1-206ENST00000358278 CWC25Q9NXE8 425 aaPredicted RBP19.28■□□□□ 0.68
TPM1-206ENST00000358278 ATF5Q9Y2D1 282 aaPredicted RBP19.28■□□□□ 0.68
TPM1-206ENST00000358278 LAMB2P55268 1798 aa19.28■□□□□ 0.68
TPM1-206ENST00000358278 NPHP1O15259 732 aa19.28■□□□□ 0.68
TPM1-206ENST00000358278 TM4SF1P30408 202 aa19.28■□□□□ 0.68
TPM1-206ENST00000358278 NLRP10Q86W26 655 aa19.28■□□□□ 0.68
TPM1-206ENST00000358278 PANK1Q8TE04 598 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms