RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 GOLGA6L4A6NEF3 574 aa14.03□□□□□ -0.16
LIMK2-202ENST00000333611 CKAP2LQ8IYA6 745 aa14.03□□□□□ -0.16
LIMK2-202ENST00000333611 SRCIN1Q9C0H9 1055 aa14.03□□□□□ -0.16
LIMK2-202ENST00000333611 FRMPD1Q5SYB0 1578 aa14.03□□□□□ -0.16
LIMK2-202ENST00000333611 WDR33Q9C0J8 1336 aaKnown RBP14.03□□□□□ -0.16
LIMK2-202ENST00000333611 KDM4AO75164 1064 aa14.03□□□□□ -0.16
LIMK2-202ENST00000333611 GNAI3P08754 354 aa14.03□□□□□ -0.16
LIMK2-202ENST00000333611 LMAN1P49257 510 aa14.03□□□□□ -0.16
LIMK2-202ENST00000333611 MCM2P49736 904 aa14.03□□□□□ -0.16
LIMK2-202ENST00000333611 KMT5BQ4FZB7 885 aa14.03□□□□□ -0.16
LIMK2-202ENST00000333611 CEP135Q66GS9 1140 aa14.03□□□□□ -0.16
LIMK2-202ENST00000333611 ZNF397Q8NF99 534 aaPredicted RBP14.03□□□□□ -0.16
LIMK2-202ENST00000333611 NRBP1Q9UHY1 535 aa14.03□□□□□ -0.16
LIMK2-202ENST00000333611 SRGAP3O43295 1099 aa14.02□□□□□ -0.16
LIMK2-202ENST00000333611 OSCARQ8IYS5 282 aa14.02□□□□□ -0.16
LIMK2-202ENST00000333611 MAP3K19Q56UN5 1328 aa14.02□□□□□ -0.17
LIMK2-202ENST00000333611 CCDC34Q96HJ3 373 aa14.02□□□□□ -0.17
LIMK2-202ENST00000333611 TCEANC2Q96MN5 208 aa14.02□□□□□ -0.17
LIMK2-202ENST00000333611 KCNG1Q9UIX4 513 aa14.02□□□□□ -0.17
LIMK2-202ENST00000333611 TAOK2Q9UL54 1235 aa14.02□□□□□ -0.17
LIMK2-202ENST00000333611 NEURL4Q96JN8 1562 aa14.02□□□□□ -0.17
LIMK2-202ENST00000333611 MAP2P11137 1827 aaKnown RBP14.02□□□□□ -0.17
LIMK2-202ENST00000333611 FBXO38Q6PIJ6 1188 aa14.02□□□□□ -0.17
LIMK2-202ENST00000333611 FAM184AQ8NB25 1140 aa14.02□□□□□ -0.17
LIMK2-202ENST00000333611 CASTP20810 708 aaKnown RBP14.01□□□□□ -0.17
LIMK2-202ENST00000333611 PHAXQ9H814 394 aaKnown RBP14.01□□□□□ -0.17
LIMK2-202ENST00000333611 SMTNL1A8MU46 457 aa14.01□□□□□ -0.17
LIMK2-202ENST00000333611 GPS2Q13227 327 aa14.01□□□□□ -0.17
LIMK2-202ENST00000333611 HDGFL1Q5TGJ6 251 aa14.01□□□□□ -0.17
LIMK2-202ENST00000333611 FAM212AQ96EL1 285 aa14.01□□□□□ -0.17
LIMK2-202ENST00000333611 DEF6Q9H4E7 631 aa14.01□□□□□ -0.17
LIMK2-202ENST00000333611 TTC21BQ7Z4L5 1316 aa14.01□□□□□ -0.17
LIMK2-202ENST00000333611 MLH3Q9UHC1 1453 aa14.01□□□□□ -0.17
LIMK2-202ENST00000333611 CCDC30Q5VVM6 783 aa14□□□□□ -0.17
LIMK2-202ENST00000333611 PPP1R42Q7Z4L9 355 aa14□□□□□ -0.17
LIMK2-202ENST00000333611 KCNF1Q9H3M0 494 aa14□□□□□ -0.17
LIMK2-202ENST00000333611 ZCCHC17Q9NP64 241 aaKnown RBP14□□□□□ -0.17
LIMK2-202ENST00000333611 EDC4Q6P2E9 1401 aaKnown RBP14□□□□□ -0.17
LIMK2-202ENST00000333611 METP08581 1390 aa14□□□□□ -0.17
LIMK2-202ENST00000333611 PRR36Q9H6K5 1346 aa14□□□□□ -0.17
LIMK2-202ENST00000333611 FAM69CQ0P6D2 419 aa14□□□□□ -0.17
LIMK2-202ENST00000333611 FAM173BQ6P4H8 233 aa14□□□□□ -0.17
LIMK2-202ENST00000333611 LUZP1Q86V48 1076 aa14□□□□□ -0.17
LIMK2-202ENST00000333611 FAM177A1Q8N128 213 aaPredicted RBP14□□□□□ -0.17
LIMK2-202ENST00000333611 NECAB1Q8N987 351 aa14□□□□□ -0.17
LIMK2-202ENST00000333611 CCDC9Q9Y3X0 531 aaKnown RBP14□□□□□ -0.17
LIMK2-202ENST00000333611 SIGLEC1Q9BZZ2 1709 aa14□□□□□ -0.17
LIMK2-202ENST00000333611 FOSBP53539 338 aa14□□□□□ -0.17
LIMK2-202ENST00000333611 AK2P54819 239 aa14□□□□□ -0.17
LIMK2-202ENST00000333611 ARHGEF40Q8TER5 1519 aa14□□□□□ -0.17
LIMK2-202ENST00000333611 PIK3C2BO00750 1634 aa13.99□□□□□ -0.17
LIMK2-202ENST00000333611 CLGNO14967 610 aa13.99□□□□□ -0.17
LIMK2-202ENST00000333611 PTPN14Q15678 1187 aa13.99□□□□□ -0.17
LIMK2-202ENST00000333611 CCDC183Q5T5S1 534 aa13.99□□□□□ -0.17
LIMK2-202ENST00000333611 HOMER1Q86YM7 354 aa13.99□□□□□ -0.17
LIMK2-202ENST00000333611 HECW2Q9P2P5 1572 aa13.99□□□□□ -0.17
LIMK2-202ENST00000333611 DHX16O60231 1041 aaKnown RBP13.99□□□□□ -0.17
LIMK2-202ENST00000333611 NLRP6P59044 892 aa13.99□□□□□ -0.17
LIMK2-202ENST00000333611 JAKMIP1Q96N16 626 aaKnown RBP13.99□□□□□ -0.17
LIMK2-202ENST00000333611 DNM1Q05193 864 aaKnown RBP13.99□□□□□ -0.17
LIMK2-202ENST00000333611 ATP8B2P98198 1209 aa13.98□□□□□ -0.17
LIMK2-202ENST00000333611 PRPF40BQ6NWY9 871 aaKnown RBP13.98□□□□□ -0.17
LIMK2-202ENST00000333611 RASEFQ8IZ41 740 aa13.98□□□□□ -0.17
LIMK2-202ENST00000333611 STX6O43752 255 aa13.98□□□□□ -0.17
LIMK2-202ENST00000333611 STK3Q13188 491 aa13.98□□□□□ -0.17
LIMK2-202ENST00000333611 ERCC6LQ2NKX8 1250 aa13.98□□□□□ -0.17
LIMK2-202ENST00000333611 SYT1P21579 422 aa13.98□□□□□ -0.17
LIMK2-202ENST00000333611 MYO1CO00159 1063 aa13.97□□□□□ -0.17
LIMK2-202ENST00000333611 MYCBPQ99417 103 aaPredicted RBP13.97□□□□□ -0.17
LIMK2-202ENST00000333611 EYA1Q99502 592 aa13.97□□□□□ -0.17
LIMK2-202ENST00000333611 CPS1P31327 1500 aa13.97□□□□□ -0.17
LIMK2-202ENST00000333611 BMS1Q14692 1282 aaKnown RBP13.97□□□□□ -0.17
LIMK2-202ENST00000333611 SRRTQ9BXP5 876 aaKnown RBP13.97□□□□□ -0.17
LIMK2-202ENST00000333611 CWC15Q9P013 229 aaKnown RBP13.97□□□□□ -0.17
LIMK2-202ENST00000333611 MORC2Q9Y6X9 1032 aaPredicted RBP13.97□□□□□ -0.17
LIMK2-202ENST00000333611 LCMT1Q9UIC8 334 aa13.96□□□□□ -0.17
LIMK2-202ENST00000333611 MYO5BQ9ULV0 1848 aa13.96□□□□□ -0.17
LIMK2-202ENST00000333611 ALKQ9UM73 1620 aa13.96□□□□□ -0.17
LIMK2-202ENST00000333611 RGS12O14924 1447 aa13.96□□□□□ -0.17
LIMK2-202ENST00000333611 KNDC1Q76NI1 1749 aa13.96□□□□□ -0.17
LIMK2-202ENST00000333611 TAF7Q15545 349 aaPredicted RBP13.96□□□□□ -0.17
LIMK2-202ENST00000333611 ZSCAN26Q16670 478 aa13.96□□□□□ -0.17
LIMK2-202ENST00000333611 SPTLC3Q9NUV7 552 aa13.96□□□□□ -0.17
LIMK2-202ENST00000333611 LARGE1O95461 756 aa13.96□□□□□ -0.18
LIMK2-202ENST00000333611 ZSCAN22P10073 491 aaPredicted RBP13.96□□□□□ -0.18
LIMK2-202ENST00000333611 GJB2P29033 226 aa13.96□□□□□ -0.18
LIMK2-202ENST00000333611 CUL4AQ13619 759 aa13.96□□□□□ -0.18
LIMK2-202ENST00000333611 CNTROBQ8N137 903 aa13.96□□□□□ -0.18
LIMK2-202ENST00000333611 PPFIA3O75145 1194 aa13.95□□□□□ -0.18
LIMK2-202ENST00000333611 NBPF7P0C2Y1 421 aaPredicted RBP13.95□□□□□ -0.18
LIMK2-202ENST00000333611 MNS1Q8NEH6 495 aa13.95□□□□□ -0.18
LIMK2-202ENST00000333611 RHPN1Q8TCX5 695 aa13.95□□□□□ -0.18
LIMK2-202ENST00000333611 USP44Q9H0E7 712 aa13.95□□□□□ -0.18
LIMK2-202ENST00000333611 TFIP11Q9UBB9 837 aaKnown RBP13.95□□□□□ -0.18
LIMK2-202ENST00000333611 SNX14Q9Y5W7 946 aa13.95□□□□□ -0.18
LIMK2-202ENST00000333611 LMOD2Q6P5Q4 547 aa13.95□□□□□ -0.18
LIMK2-202ENST00000333611 TMCO3Q6UWJ1 677 aa13.95□□□□□ -0.18
LIMK2-202ENST00000333611 CLIP2Q9UDT6 1046 aa13.95□□□□□ -0.18
LIMK2-202ENST00000333611 CDK12Q9NYV4 1490 aaPredicted RBP13.95□□□□□ -0.18
LIMK2-202ENST00000333611 CEBPZQ03701 1054 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms