RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 CCDC83Q8IWF9 413 aa11.34□□□□□ -0.59
SS18L1-201ENST00000331758 SLC52A2Q9HAB3 445 aa11.34□□□□□ -0.59
SS18L1-201ENST00000331758 SSFA2P28290 1259 aa11.34□□□□□ -0.59
SS18L1-201ENST00000331758 ANKRD1Q15327 319 aa11.34□□□□□ -0.59
SS18L1-201ENST00000331758 DDX46Q7L014 1031 aaKnown RBP11.34□□□□□ -0.59
SS18L1-201ENST00000331758 CCDC34Q96HJ3 373 aa11.34□□□□□ -0.59
SS18L1-201ENST00000331758 GNL3LQ9NVN8 582 aaKnown RBP11.34□□□□□ -0.59
SS18L1-201ENST00000331758 WDR33Q9C0J8 1336 aaKnown RBP11.34□□□□□ -0.59
SS18L1-201ENST00000331758 TOM1O60784 492 aa11.34□□□□□ -0.59
SS18L1-201ENST00000331758 HOXB7P09629 217 aa11.34□□□□□ -0.59
SS18L1-201ENST00000331758 FAM43AQ8N2R8 423 aa11.34□□□□□ -0.59
SS18L1-201ENST00000331758 ANKRD18BA2A2Z9 1011 aa11.33□□□□□ -0.6
SS18L1-201ENST00000331758 BECN2A8MW95 431 aa11.33□□□□□ -0.6
SS18L1-201ENST00000331758 ZNF853P0CG23 659 aa11.33□□□□□ -0.6
SS18L1-201ENST00000331758 NEXMIFQ5QGS0 1516 aa11.33□□□□□ -0.6
SS18L1-201ENST00000331758 ESYT1Q9BSJ8 1104 aa11.33□□□□□ -0.6
SS18L1-201ENST00000331758 BICC1Q9H694 974 aaKnown RBP11.33□□□□□ -0.6
SS18L1-201ENST00000331758 LRP2BPQ9P2M1 347 aa11.33□□□□□ -0.6
SS18L1-201ENST00000331758 A1BGP04217 495 aa11.33□□□□□ -0.6
SS18L1-201ENST00000331758 KLHDC4Q8TBB5 520 aa11.33□□□□□ -0.6
SS18L1-201ENST00000331758 ZNF652Q9Y2D9 606 aa11.33□□□□□ -0.6
SS18L1-201ENST00000331758 PCDH11XQ9BZA7 1347 aa11.33□□□□□ -0.6
SS18L1-201ENST00000331758 PCDH11YQ9BZA8 1340 aa11.33□□□□□ -0.6
SS18L1-201ENST00000331758 FERMT3Q86UX7 667 aa11.33□□□□□ -0.6
SS18L1-201ENST00000331758 MBD3O95983 291 aa11.33□□□□□ -0.6
SS18L1-201ENST00000331758 C8orf37Q96NL8 207 aa11.33□□□□□ -0.6
SS18L1-201ENST00000331758 CLTCQ00610 1675 aaKnown RBP11.33□□□□□ -0.6
SS18L1-201ENST00000331758 GIGYF1O75420 1035 aaPredicted RBP11.32□□□□□ -0.6
SS18L1-201ENST00000331758 MRE11P49959 708 aa11.32□□□□□ -0.6
SS18L1-201ENST00000331758 KRT32Q14532 448 aa11.32□□□□□ -0.6
SS18L1-201ENST00000331758 CREBRFQ8IUR6 639 aa11.32□□□□□ -0.6
SS18L1-201ENST00000331758 DDX11Q96FC9 970 aa11.32□□□□□ -0.6
SS18L1-201ENST00000331758 CDK12Q9NYV4 1490 aaPredicted RBP11.32□□□□□ -0.6
SS18L1-201ENST00000331758 GOLGA6L19H0YKK7 550 aa11.32□□□□□ -0.6
SS18L1-201ENST00000331758 DHX16O60231 1041 aaKnown RBP11.32□□□□□ -0.6
SS18L1-201ENST00000331758 ATP2B1P20020 1258 aa11.32□□□□□ -0.6
SS18L1-201ENST00000331758 CDK11BP21127 795 aaKnown RBP11.32□□□□□ -0.6
SS18L1-201ENST00000331758 ZSCAN25Q6NSZ9 544 aa11.32□□□□□ -0.6
SS18L1-201ENST00000331758 TNPO1Q92973 898 aaKnown RBP11.32□□□□□ -0.6
SS18L1-201ENST00000331758 PHF23Q9BUL5 403 aaPredicted RBP11.32□□□□□ -0.6
SS18L1-201ENST00000331758 USP16Q9Y5T5 823 aa11.32□□□□□ -0.6
SS18L1-201ENST00000331758 PTPRMP28827 1452 aa11.32□□□□□ -0.6
SS18L1-201ENST00000331758 SART3Q15020 963 aaKnown RBP11.32□□□□□ -0.6
SS18L1-201ENST00000331758 USP44Q9H0E7 712 aa11.32□□□□□ -0.6
SS18L1-201ENST00000331758 RAI14Q9P0K7 980 aa11.32□□□□□ -0.6
SS18L1-201ENST00000331758 ZPR1O75312 459 aa11.31□□□□□ -0.6
SS18L1-201ENST00000331758 CHAF1AQ13111 956 aaPredicted RBP11.31□□□□□ -0.6
SS18L1-201ENST00000331758 LAMC1P11047 1609 aa11.31□□□□□ -0.6
SS18L1-201ENST00000331758 SETD1BQ9UPS6 1966 aaKnown RBP11.31□□□□□ -0.6
SS18L1-201ENST00000331758 ATP6V1AP38606 617 aa11.31□□□□□ -0.6
SS18L1-201ENST00000331758 CCDC73Q6ZRK6 1079 aa11.31□□□□□ -0.6
SS18L1-201ENST00000331758 ZSCAN31Q96LW9 406 aaPredicted RBP11.31□□□□□ -0.6
SS18L1-201ENST00000331758 CTNNA3Q9UI47 895 aa11.31□□□□□ -0.6
SS18L1-201ENST00000331758 LMTK3Q96Q04 1460 aa11.31□□□□□ -0.6
SS18L1-201ENST00000331758 NASPP49321 788 aaPredicted RBP11.31□□□□□ -0.6
SS18L1-201ENST00000331758 TPM4P67936 248 aa11.31□□□□□ -0.6
SS18L1-201ENST00000331758 SAFBQ15424 915 aaKnown RBP eCLIP11.31□□□□□ -0.6
SS18L1-201ENST00000331758 AIDAQ96BJ3 306 aa11.31□□□□□ -0.6
SS18L1-201ENST00000331758 NACAP1Q9BZK3 213 aa11.31□□□□□ -0.6
SS18L1-201ENST00000331758 ARHGEF40Q8TER5 1519 aa11.31□□□□□ -0.6
SS18L1-201ENST00000331758 TCEANC2Q96MN5 208 aa11.31□□□□□ -0.6
SS18L1-201ENST00000331758 PHKG2P15735 406 aa11.3□□□□□ -0.6
SS18L1-201ENST00000331758 TDO2P48775 406 aa11.3□□□□□ -0.6
SS18L1-201ENST00000331758 RTL1A6NKG5 1358 aa11.3□□□□□ -0.6
SS18L1-201ENST00000331758 LIMCH1Q9UPQ0 1083 aa11.3□□□□□ -0.6
SS18L1-201ENST00000331758 U3KPZ7 1027 aaPredicted RBP11.3□□□□□ -0.6
SS18L1-201ENST00000331758 PIK3C2BO00750 1634 aa11.3□□□□□ -0.6
SS18L1-201ENST00000331758 MARCH6O60337 910 aa11.29□□□□□ -0.6
SS18L1-201ENST00000331758 IMMTQ16891 758 aaKnown RBP11.29□□□□□ -0.6
SS18L1-201ENST00000331758 METTL22Q9BUU2 404 aaPredicted RBP11.29□□□□□ -0.6
SS18L1-201ENST00000331758 CHMLP26374 656 aa11.29□□□□□ -0.6
SS18L1-201ENST00000331758 SDF4Q9BRK5 362 aa11.29□□□□□ -0.6
SS18L1-201ENST00000331758 SASS6Q6UVJ0 657 aa11.29□□□□□ -0.6
SS18L1-201ENST00000331758 FAM89AQ96GI7 184 aa11.29□□□□□ -0.6
SS18L1-201ENST00000331758 SUCLG2Q96I99 432 aa11.29□□□□□ -0.6
SS18L1-201ENST00000331758 PNPLA6Q8IY17 1366 aa11.28□□□□□ -0.6
SS18L1-201ENST00000331758 TFCP2Q12800 502 aa11.28□□□□□ -0.6
SS18L1-201ENST00000331758 TMX3Q96JJ7 454 aa11.28□□□□□ -0.6
SS18L1-201ENST00000331758 DNAJC5Q9H3Z4 198 aa11.28□□□□□ -0.6
SS18L1-201ENST00000331758 ERBB3P21860 1342 aa11.28□□□□□ -0.6
SS18L1-201ENST00000331758 FRMPD1Q5SYB0 1578 aa11.28□□□□□ -0.6
SS18L1-201ENST00000331758 PRAMEF22A3QJZ6 481 aa11.28□□□□□ -0.6
SS18L1-201ENST00000331758 KRT85P78386 507 aa11.28□□□□□ -0.6
SS18L1-201ENST00000331758 HSP90AA2PQ14568 343 aaPredicted RBP11.28□□□□□ -0.6
SS18L1-201ENST00000331758 PROSER3Q2NL68 480 aa11.28□□□□□ -0.6
SS18L1-201ENST00000331758 DZIP3Q86Y13 1208 aaKnown RBP11.28□□□□□ -0.6
SS18L1-201ENST00000331758 DNAJC10Q8IXB1 793 aa11.28□□□□□ -0.6
SS18L1-201ENST00000331758 AGLP35573 1532 aa11.28□□□□□ -0.6
SS18L1-201ENST00000331758 HAND2P61296 217 aa11.28□□□□□ -0.6
SS18L1-201ENST00000331758 DIP2BQ9P265 1576 aa11.28□□□□□ -0.6
SS18L1-201ENST00000331758 PPFIA3O75145 1194 aa11.27□□□□□ -0.6
SS18L1-201ENST00000331758 IL15P40933 162 aaPredicted RBP11.27□□□□□ -0.6
SS18L1-201ENST00000331758 KLHL34Q8N239 644 aa11.27□□□□□ -0.6
SS18L1-201ENST00000331758 NUP133Q8WUM0 1156 aa11.27□□□□□ -0.6
SS18L1-201ENST00000331758 USP26Q9BXU7 913 aa11.27□□□□□ -0.6
SS18L1-201ENST00000331758 GDPD2Q9HCC8 539 aa11.27□□□□□ -0.6
SS18L1-201ENST00000331758 PLBD2Q8NHP8 589 aa11.27□□□□□ -0.61
SS18L1-201ENST00000331758 TRIM34Q9BYJ4 488 aa11.27□□□□□ -0.61
SS18L1-201ENST00000331758 RBM8AQ9Y5S9 174 aaKnown RBP11.27□□□□□ -0.61
SS18L1-201ENST00000331758 NRXN1Q9ULB1 1477 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms