RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 ZHX3Q9H4I2 956 aa19.36■□□□□ 0.69
CLIP4-201ENST00000320081 HELBQ8NG08 1087 aaPredicted RBP19.36■□□□□ 0.69
CLIP4-201ENST00000320081 PIK3R4Q99570 1358 aa19.36■□□□□ 0.69
CLIP4-201ENST00000320081 NACAP1Q9BZK3 213 aa19.35■□□□□ 0.69
CLIP4-201ENST00000320081 AK2P54819 239 aa19.35■□□□□ 0.69
CLIP4-201ENST00000320081 BRMS1Q9HCU9 246 aa19.35■□□□□ 0.69
CLIP4-201ENST00000320081 RIMS2Q9UQ26 1411 aa19.35■□□□□ 0.69
CLIP4-201ENST00000320081 GRM8O00222 908 aa19.34■□□□□ 0.69
CLIP4-201ENST00000320081 PTPRTO14522 1441 aa19.34■□□□□ 0.69
CLIP4-201ENST00000320081 CBX1P83916 185 aa19.34■□□□□ 0.69
CLIP4-201ENST00000320081 FSIP1Q8NA03 581 aa19.34■□□□□ 0.69
CLIP4-201ENST00000320081 NPATQ14207 1427 aa19.34■□□□□ 0.69
CLIP4-201ENST00000320081 KIF21AQ7Z4S6 1674 aa19.34■□□□□ 0.69
CLIP4-201ENST00000320081 ZNF165P49910 485 aa19.34■□□□□ 0.69
CLIP4-201ENST00000320081 HMGN5P82970 282 aaKnown RBP19.34■□□□□ 0.69
CLIP4-201ENST00000320081 ORAI2Q96SN7 254 aa19.34■□□□□ 0.69
CLIP4-201ENST00000320081 TNRQ92752 1358 aa19.33■□□□□ 0.69
CLIP4-201ENST00000320081 CHMLP26374 656 aa19.33■□□□□ 0.69
CLIP4-201ENST00000320081 RAB3GAP1Q15042 981 aa19.33■□□□□ 0.69
CLIP4-201ENST00000320081 EDC3Q96F86 508 aaKnown RBP19.33■□□□□ 0.69
CLIP4-201ENST00000320081 NEK1Q96PY6 1258 aa19.33■□□□□ 0.69
CLIP4-201ENST00000320081 NAPBQ9H115 298 aa19.33■□□□□ 0.69
CLIP4-201ENST00000320081 SSBP05455 408 aaKnown RBP eCLIP19.33■□□□□ 0.68
CLIP4-201ENST00000320081 ARHGEF12Q9NZN5 1544 aa19.33■□□□□ 0.68
CLIP4-201ENST00000320081 STARD3NLO95772 234 aa19.33■□□□□ 0.68
CLIP4-201ENST00000320081 NMIQ13287 307 aaPredicted RBP19.33■□□□□ 0.68
CLIP4-201ENST00000320081 MAPK8IP2Q13387 824 aaPredicted RBP19.33■□□□□ 0.68
CLIP4-201ENST00000320081 CPLX3Q8WVH0 158 aa19.33■□□□□ 0.68
CLIP4-201ENST00000320081 ITSN2Q9NZM3 1697 aa19.32■□□□□ 0.68
CLIP4-201ENST00000320081 RANBP6O60518 1105 aaKnown RBP19.32■□□□□ 0.68
CLIP4-201ENST00000320081 SCAND2PQ9GZW5 306 aaPredicted RBP19.32■□□□□ 0.68
CLIP4-201ENST00000320081 CTNNA3Q9UI47 895 aa19.32■□□□□ 0.68
CLIP4-201ENST00000320081 USP16Q9Y5T5 823 aa19.32■□□□□ 0.68
CLIP4-201ENST00000320081 KCNQ3O43525 872 aa19.32■□□□□ 0.68
CLIP4-201ENST00000320081 RRP9O43818 475 aaKnown RBP19.32■□□□□ 0.68
CLIP4-201ENST00000320081 RXRAP19793 462 aa19.32■□□□□ 0.68
CLIP4-201ENST00000320081 IFNL2Q8IZJ0 200 aa19.32■□□□□ 0.68
CLIP4-201ENST00000320081 JMYQ8N9B5 988 aa19.32■□□□□ 0.68
CLIP4-201ENST00000320081 DACT1Q9NYF0 836 aa19.32■□□□□ 0.68
CLIP4-201ENST00000320081 HSPA2P54652 639 aa19.32■□□□□ 0.68
CLIP4-201ENST00000320081 TIMM10P62072 90 aa19.32■□□□□ 0.68
CLIP4-201ENST00000320081 YTHDC2Q9H6S0 1430 aaKnown RBP19.32■□□□□ 0.68
CLIP4-201ENST00000320081 WDR7Q9Y4E6 1490 aa19.32■□□□□ 0.68
CLIP4-201ENST00000320081 ZNF213O14771 459 aa19.31■□□□□ 0.68
CLIP4-201ENST00000320081 CCDC129Q6ZRS4 1044 aa19.31■□□□□ 0.68
CLIP4-201ENST00000320081 CCDC47Q96A33 483 aaKnown RBP19.31■□□□□ 0.68
CLIP4-201ENST00000320081 SH2B1Q9NRF2 756 aaPredicted RBP19.31■□□□□ 0.68
CLIP4-201ENST00000320081 ZSCAN22P10073 491 aaPredicted RBP19.31■□□□□ 0.68
CLIP4-201ENST00000320081 GCP02774 474 aa19.31■□□□□ 0.68
CLIP4-201ENST00000320081 OFD1O75665 1012 aa19.3■□□□□ 0.68
CLIP4-201ENST00000320081 CEP89Q96ST8 783 aa19.3■□□□□ 0.68
CLIP4-201ENST00000320081 ORC3Q9UBD5 711 aaPredicted RBP19.3■□□□□ 0.68
CLIP4-201ENST00000320081 SBNO2Q9Y2G9 1366 aa19.3■□□□□ 0.68
CLIP4-201ENST00000320081 CLIP2Q9UDT6 1046 aa19.3■□□□□ 0.68
CLIP4-201ENST00000320081 SNX21Q969T3 373 aa19.3■□□□□ 0.68
CLIP4-201ENST00000320081 EIF4G3O43432 1585 aaKnown RBP19.3■□□□□ 0.68
CLIP4-201ENST00000320081 PATL2C9JE40 543 aaKnown RBP19.29■□□□□ 0.68
CLIP4-201ENST00000320081 CD2BP2O95400 341 aaKnown RBP19.29■□□□□ 0.68
CLIP4-201ENST00000320081 UHRF1BP1LA0JNW5 1464 aa19.29■□□□□ 0.68
CLIP4-201ENST00000320081 GSPT1P15170 499 aaKnown RBP19.29■□□□□ 0.68
CLIP4-201ENST00000320081 ZNF518AQ6AHZ1 1483 aa19.29■□□□□ 0.68
CLIP4-201ENST00000320081 IFIT3O14879 490 aaKnown RBP19.28■□□□□ 0.68
CLIP4-201ENST00000320081 HOXC9P31274 260 aa19.28■□□□□ 0.68
CLIP4-201ENST00000320081 KSR2Q6VAB6 950 aa19.28■□□□□ 0.68
CLIP4-201ENST00000320081 SNRPA1P09661 255 aaKnown RBP19.28■□□□□ 0.68
CLIP4-201ENST00000320081 C17orf53Q8N3J3 647 aaPredicted RBP19.28■□□□□ 0.68
CLIP4-201ENST00000320081 ACSBG1Q96GR2 724 aa19.28■□□□□ 0.68
CLIP4-201ENST00000320081 UGGT1Q9NYU2 1555 aa19.28■□□□□ 0.68
CLIP4-201ENST00000320081 SPDYE4A6NLX3 237 aa19.28■□□□□ 0.68
CLIP4-201ENST00000320081 FAM227BQ96M60 508 aa19.28■□□□□ 0.68
CLIP4-201ENST00000320081 BICC1Q9H694 974 aaKnown RBP19.28■□□□□ 0.68
CLIP4-201ENST00000320081 CAGE1Q8TC20 777 aa19.28■□□□□ 0.68
CLIP4-201ENST00000320081 MARCKSP29966 332 aaPredicted RBP19.27■□□□□ 0.68
CLIP4-201ENST00000320081 USP5P45974 858 aa19.27■□□□□ 0.68
CLIP4-201ENST00000320081 LRSAM1Q6UWE0 723 aa19.27■□□□□ 0.68
CLIP4-201ENST00000320081 USP19O94966 1318 aa19.27■□□□□ 0.68
CLIP4-201ENST00000320081 CHL1O00533 1208 aa19.27■□□□□ 0.68
CLIP4-201ENST00000320081 IGHMBP2P38935 993 aaKnown RBP19.27■□□□□ 0.68
CLIP4-201ENST00000320081 GNL3LQ9NVN8 582 aaKnown RBP19.27■□□□□ 0.68
CLIP4-201ENST00000320081 PPP1R1BQ9UD71 204 aaPredicted RBP19.27■□□□□ 0.68
CLIP4-201ENST00000320081 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.27■□□□□ 0.68
CLIP4-201ENST00000320081 V9GYY5 206 aaPredicted RBP19.27■□□□□ 0.68
CLIP4-201ENST00000320081 Q6ZUG5 572 aa19.27■□□□□ 0.67
CLIP4-201ENST00000320081 CWC25Q9NXE8 425 aaPredicted RBP19.27■□□□□ 0.67
CLIP4-201ENST00000320081 ZMYM4Q5VZL5 1548 aa19.27■□□□□ 0.67
CLIP4-201ENST00000320081 SYT1P21579 422 aa19.26■□□□□ 0.67
CLIP4-201ENST00000320081 UBE2HP62256 183 aa19.26■□□□□ 0.67
CLIP4-201ENST00000320081 RBSNQ9H1K0 784 aa19.26■□□□□ 0.67
CLIP4-201ENST00000320081 DNAJC25Q9H1X3 360 aa19.26■□□□□ 0.67
CLIP4-201ENST00000320081 TCEAL9Q9UHQ7 104 aa19.26■□□□□ 0.67
CLIP4-201ENST00000320081 JAG2Q9Y219 1238 aa19.26■□□□□ 0.67
CLIP4-201ENST00000320081 TRMT1LQ7Z2T5 733 aaKnown RBP19.26■□□□□ 0.67
CLIP4-201ENST00000320081 ARGLU1Q9NWB6 273 aaPredicted RBP19.26■□□□□ 0.67
CLIP4-201ENST00000320081 ABCC1P33527 1531 aa19.26■□□□□ 0.67
CLIP4-201ENST00000320081 KLF18A0A0U1RQI7 1052 aa19.25■□□□□ 0.67
CLIP4-201ENST00000320081 ERICH4A6NGS2 130 aa19.25■□□□□ 0.67
CLIP4-201ENST00000320081 SOS1Q07889 1333 aaPredicted RBP19.25■□□□□ 0.67
CLIP4-201ENST00000320081 TFCP2Q12800 502 aa19.25■□□□□ 0.67
CLIP4-201ENST00000320081 CCAR1Q8IX12 1150 aaKnown RBP19.25■□□□□ 0.67
CLIP4-201ENST00000320081 FLT4P35916 1363 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms