RNA–Protein interactions for RNA: ENST00000262055.8

LETMD1-201, Transcript of LETM1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETMD1, Length 2,112 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-201ENST00000262055 STARD3NLO95772 234 aa18.43■□□□□ 0.54
LETMD1-201ENST00000262055 UPF1Q92900 1129 aaKnown RBP eCLIP18.43■□□□□ 0.542e-8■■■□□ 17.9
LETMD1-201ENST00000262055 DDX21Q9NR30 783 aaKnown RBP eCLIP18.43■□□□□ 0.54
LETMD1-201ENST00000262055 PODXL2Q9NZ53 605 aa18.43■□□□□ 0.54
LETMD1-201ENST00000262055 NUP188Q5SRE5 1749 aa18.43■□□□□ 0.54
LETMD1-201ENST00000262055 DBF4Q9UBU7 674 aaPredicted RBP18.43■□□□□ 0.54
LETMD1-201ENST00000262055 FSD2A1L4K1 749 aa18.42■□□□□ 0.54
LETMD1-201ENST00000262055 CANXP27824 592 aaKnown RBP18.42■□□□□ 0.54
LETMD1-201ENST00000262055 SLC27A3Q5K4L6 730 aa18.42■□□□□ 0.54
LETMD1-201ENST00000262055 BECN1Q14457 450 aa18.41■□□□□ 0.54
LETMD1-201ENST00000262055 STK31Q9BXU1 1019 aa18.41■□□□□ 0.54
LETMD1-201ENST00000262055 NOB1Q9ULX3 412 aaKnown RBP18.41■□□□□ 0.54
LETMD1-201ENST00000262055 CCDC87Q9NVE4 849 aa18.41■□□□□ 0.54
LETMD1-201ENST00000262055 BRPF1P55201 1214 aaPredicted RBP18.4■□□□□ 0.54
LETMD1-201ENST00000262055 SF3B2Q13435 895 aaKnown RBP18.4■□□□□ 0.54
LETMD1-201ENST00000262055 ERBB4Q15303 1308 aa18.39■□□□□ 0.54
LETMD1-201ENST00000262055 CNTNAP4Q9C0A0 1308 aa18.39■□□□□ 0.54
LETMD1-201ENST00000262055 BAG6P46379 1132 aa18.39■□□□□ 0.53
LETMD1-201ENST00000262055 FLIIQ13045 1269 aa18.39■□□□□ 0.53
LETMD1-201ENST00000262055 TPM2P07951 284 aa18.38■□□□□ 0.53
LETMD1-201ENST00000262055 AIMP1Q12904 312 aaKnown RBP18.38■□□□□ 0.53
LETMD1-201ENST00000262055 ZNF827Q17R98 1081 aa18.38■□□□□ 0.53
LETMD1-201ENST00000262055 XAGE3Q8WTP9 111 aa18.38■□□□□ 0.53
LETMD1-201ENST00000262055 ZNF330Q9Y3S2 320 aaPredicted RBP18.38■□□□□ 0.53
LETMD1-201ENST00000262055 C4AP0C0L4 1744 aa18.38■□□□□ 0.53
LETMD1-201ENST00000262055 GOLGA6L3A6NEY3 463 aa18.38■□□□□ 0.53
LETMD1-201ENST00000262055 TTLL7Q6ZT98 887 aa18.38■□□□□ 0.53
LETMD1-201ENST00000262055 COPS6Q7L5N1 327 aa18.38■□□□□ 0.53
LETMD1-201ENST00000262055 ARFGEF2Q9Y6D5 1785 aa18.38■□□□□ 0.53
LETMD1-201ENST00000262055 EIF5P55010 431 aaKnown RBP18.37■□□□□ 0.53
LETMD1-201ENST00000262055 C20orf194Q5TEA3 1177 aa18.37■□□□□ 0.53
LETMD1-201ENST00000262055 CCDC125Q86Z20 511 aa18.37■□□□□ 0.53
LETMD1-201ENST00000262055 HYPKQ9NX55 129 aa18.37■□□□□ 0.53
LETMD1-201ENST00000262055 RC3H1Q5TC82 1133 aaKnown RBP18.37■□□□□ 0.53
LETMD1-201ENST00000262055 ISY1Q9ULR0 285 aaKnown RBP18.37■□□□□ 0.53
LETMD1-201ENST00000262055 F6X3S4 739 aa18.36■□□□□ 0.53
LETMD1-201ENST00000262055 GNPATO15228 680 aa18.36■□□□□ 0.53
LETMD1-201ENST00000262055 TRIM27P14373 513 aa18.36■□□□□ 0.53
LETMD1-201ENST00000262055 IL6STP40189 918 aaPredicted RBP18.36■□□□□ 0.53
LETMD1-201ENST00000262055 NUP98P52948 1817 aa18.36■□□□□ 0.53
LETMD1-201ENST00000262055 KIF16BQ96L93 1317 aa18.36■□□□□ 0.53
LETMD1-201ENST00000262055 ADCY9O60503 1353 aa18.35■□□□□ 0.53
LETMD1-201ENST00000262055 RLBP1P12271 317 aa18.35■□□□□ 0.53
LETMD1-201ENST00000262055 XRCC6P12956 609 aaKnown RBP eCLIP18.35■□□□□ 0.53
LETMD1-201ENST00000262055 CLUAP1Q96AJ1 413 aa18.35■□□□□ 0.53
LETMD1-201ENST00000262055 AKT1S1Q96B36 256 aa18.35■□□□□ 0.53
LETMD1-201ENST00000262055 CHMP4AQ9BY43 222 aa18.35■□□□□ 0.53
LETMD1-201ENST00000262055 PDCL3Q9H2J4 239 aa18.35■□□□□ 0.53
LETMD1-201ENST00000262055 COL15A1P39059 1388 aa18.34■□□□□ 0.53
LETMD1-201ENST00000262055 FKBP5Q13451 457 aaPredicted RBP18.34■□□□□ 0.53
LETMD1-201ENST00000262055 RPS6KA4O75676 772 aa18.34■□□□□ 0.53
LETMD1-201ENST00000262055 ATF7IPQ6VMQ6 1270 aa18.34■□□□□ 0.53
LETMD1-201ENST00000262055 TBC1D2BQ9UPU7 963 aa18.34■□□□□ 0.53
LETMD1-201ENST00000262055 BCORQ6W2J9 1755 aa18.33■□□□□ 0.53
LETMD1-201ENST00000262055 PI4KAP2A4QPH2 592 aa18.33■□□□□ 0.52
LETMD1-201ENST00000262055 ZKSCAN2Q63HK3 967 aa18.33■□□□□ 0.52
LETMD1-201ENST00000262055 PI4KAP1Q8N8J0 262 aa18.33■□□□□ 0.52
LETMD1-201ENST00000262055 AK7Q96M32 723 aa18.33■□□□□ 0.52
LETMD1-201ENST00000262055 PTPRCP08575 1304 aa18.33■□□□□ 0.52
LETMD1-201ENST00000262055 PHF14O94880 888 aa18.32■□□□□ 0.52
LETMD1-201ENST00000262055 SKAP1Q86WV1 359 aa18.32■□□□□ 0.52
LETMD1-201ENST00000262055 N4BP2Q86UW6 1770 aaPredicted RBP18.32■□□□□ 0.52
LETMD1-201ENST00000262055 PANK1Q8TE04 598 aa18.32■□□□□ 0.52
LETMD1-201ENST00000262055 ZBTB3Q9H5J0 574 aa18.32■□□□□ 0.52
LETMD1-201ENST00000262055 ANTXR1Q9H6X2 564 aa18.32■□□□□ 0.52
LETMD1-201ENST00000262055 MRE11P49959 708 aa18.31■□□□□ 0.52
LETMD1-201ENST00000262055 ARHGAP45Q92619 1136 aa18.31■□□□□ 0.52
LETMD1-201ENST00000262055 RTCBQ9Y3I0 505 aaKnown RBP18.31■□□□□ 0.52
LETMD1-201ENST00000262055 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.31■□□□□ 0.52
LETMD1-201ENST00000262055 ARXQ96QS3 562 aa18.31■□□□□ 0.52
LETMD1-201ENST00000262055 MAP3K2Q9Y2U5 619 aa18.31■□□□□ 0.52
LETMD1-201ENST00000262055 SCN7AQ01118 1682 aa18.31■□□□□ 0.52
LETMD1-201ENST00000262055 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.3■□□□□ 0.52
LETMD1-201ENST00000262055 HLFQ16534 295 aa18.3■□□□□ 0.52
LETMD1-201ENST00000262055 ANKRD13DQ6ZTN6 518 aa18.3■□□□□ 0.52
LETMD1-201ENST00000262055 DZIP3Q86Y13 1208 aaKnown RBP18.3■□□□□ 0.52
LETMD1-201ENST00000262055 ARHGEF1Q92888 912 aaKnown RBP18.3■□□□□ 0.52
LETMD1-201ENST00000262055 AFDNP55196 1824 aaKnown RBP18.3■□□□□ 0.52
LETMD1-201ENST00000262055 ABCC4O15439 1325 aa18.3■□□□□ 0.52
LETMD1-201ENST00000262055 ANKRD36CQ5JPF3 1778 aa18.3■□□□□ 0.52
LETMD1-201ENST00000262055 KSR2Q6VAB6 950 aa18.29■□□□□ 0.52
LETMD1-201ENST00000262055 SRP68Q9UHB9 627 aaKnown RBP18.29■□□□□ 0.52
LETMD1-201ENST00000262055 QSER1Q2KHR3 1735 aa18.29■□□□□ 0.52
LETMD1-201ENST00000262055 IPO8O15397 1037 aaKnown RBP18.29■□□□□ 0.52
LETMD1-201ENST00000262055 CAMTA2O94983 1202 aa18.28■□□□□ 0.52
LETMD1-201ENST00000262055 PLBD2Q8NHP8 589 aa18.28■□□□□ 0.52
LETMD1-201ENST00000262055 TFCP2L1Q9NZI6 479 aa18.28■□□□□ 0.52
LETMD1-201ENST00000262055 MAP3K15Q6ZN16 1313 aa18.28■□□□□ 0.52
LETMD1-201ENST00000262055 SLC4A10Q6U841 1118 aa18.28■□□□□ 0.52
LETMD1-201ENST00000262055 RIC3Q7Z5B4 369 aa18.28■□□□□ 0.52
LETMD1-201ENST00000262055 DZIP1LQ8IYY4 767 aaKnown RBP18.28■□□□□ 0.52
LETMD1-201ENST00000262055 TMEM57Q8N5G2 664 aa18.28■□□□□ 0.52
LETMD1-201ENST00000262055 DNAAF4Q8WXU2 420 aa18.28■□□□□ 0.52
LETMD1-201ENST00000262055 API5Q9BZZ5 524 aaKnown RBP18.28■□□□□ 0.52
LETMD1-201ENST00000262055 PNPLA7Q6ZV29 1317 aa18.27■□□□□ 0.52
LETMD1-201ENST00000262055 SLC15A2Q16348 729 aa18.27■□□□□ 0.52
LETMD1-201ENST00000262055 BCL2L12Q9HB09 334 aa18.27■□□□□ 0.52
LETMD1-201ENST00000262055 SSFA2P28290 1259 aa18.26■□□□□ 0.51
LETMD1-201ENST00000262055 TRAPPC3LQ5T215 181 aa18.26■□□□□ 0.51
LETMD1-201ENST00000262055 COL23A1Q86Y22 540 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms