RNA–Protein interactions for RNA: ENST00000218328.12

HUWE1-201, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene HUWE1, Length 5,488 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-201ENST00000218328 GIMAP6Q6P9H5 292 aa20.58■□□□□ 0.89
HUWE1-201ENST00000218328 USP16Q9Y5T5 823 aa20.58■□□□□ 0.89
HUWE1-201ENST00000218328 ZSCAN22P10073 491 aaPredicted RBP20.58■□□□□ 0.88
HUWE1-201ENST00000218328 RNF41Q9H4P4 317 aaPredicted RBP20.58■□□□□ 0.88
HUWE1-201ENST00000218328 PAXBP1Q9Y5B6 917 aa20.58■□□□□ 0.88
HUWE1-201ENST00000218328 POLR3DP05423 398 aaPredicted RBP20.58■□□□□ 0.88
HUWE1-201ENST00000218328 MAP2K1Q02750 393 aaPredicted RBP20.58■□□□□ 0.88
HUWE1-201ENST00000218328 NEK1Q96PY6 1258 aa20.58■□□□□ 0.88
HUWE1-201ENST00000218328 CCDC113Q9H0I3 377 aa20.58■□□□□ 0.88
HUWE1-201ENST00000218328 CCDC178Q5BJE1 867 aa20.57■□□□□ 0.88
HUWE1-201ENST00000218328 XRCC6P12956 609 aaKnown RBP eCLIP20.57■□□□□ 0.88
HUWE1-201ENST00000218328 CETN2P41208 172 aa20.57■□□□□ 0.88
HUWE1-201ENST00000218328 PPP1R42Q7Z4L9 355 aa20.57■□□□□ 0.88
HUWE1-201ENST00000218328 A0A087WZG4 1122 aa20.57■□□□□ 0.88
HUWE1-201ENST00000218328 GTF2F1P35269 517 aaKnown RBP eCLIP20.57■□□□□ 0.882e-9■■■■□ 23.7
HUWE1-201ENST00000218328 CLCN1P35523 988 aa20.57■□□□□ 0.88
HUWE1-201ENST00000218328 HMG20BQ9P0W2 317 aa20.57■□□□□ 0.88
HUWE1-201ENST00000218328 MATR3P43243 847 aaKnown RBP eCLIP20.57■□□□□ 0.882e-7■■■■■ 26.8
HUWE1-201ENST00000218328 CCDC150Q8NCX0 1101 aa20.57■□□□□ 0.88
HUWE1-201ENST00000218328 PCDHB15Q9Y5E8 787 aa20.57■□□□□ 0.88
HUWE1-201ENST00000218328 SDSP20132 328 aa20.56■□□□□ 0.88
HUWE1-201ENST00000218328 DNA2P51530 1060 aa20.56■□□□□ 0.88
HUWE1-201ENST00000218328 SPDYE4A6NLX3 237 aa20.56■□□□□ 0.88
HUWE1-201ENST00000218328 POTEJP0CG39 1038 aa20.56■□□□□ 0.88
HUWE1-201ENST00000218328 NLRP5P59047 1200 aa20.56■□□□□ 0.88
HUWE1-201ENST00000218328 RAB34Q9BZG1 259 aa20.56■□□□□ 0.88
HUWE1-201ENST00000218328 IFFO1Q0D2I5 559 aa20.56■□□□□ 0.88
HUWE1-201ENST00000218328 CCDC194A0A1B0GVG4 234 aa20.56■□□□□ 0.88
HUWE1-201ENST00000218328 GOLIM4O00461 696 aa20.56■□□□□ 0.88
HUWE1-201ENST00000218328 MPHOSPH10O00566 681 aaKnown RBP20.56■□□□□ 0.88
HUWE1-201ENST00000218328 TDRD12Q587J7 1177 aaKnown RBP20.56■□□□□ 0.88
HUWE1-201ENST00000218328 ORC3Q9UBD5 711 aaPredicted RBP20.56■□□□□ 0.88
HUWE1-201ENST00000218328 MAP3K2Q9Y2U5 619 aa20.56■□□□□ 0.88
HUWE1-201ENST00000218328 WASLO00401 505 aaPredicted RBP20.55■□□□□ 0.88
HUWE1-201ENST00000218328 IARSP41252 1262 aaKnown RBP20.55■□□□□ 0.88
HUWE1-201ENST00000218328 BMS1Q14692 1282 aaKnown RBP20.55■□□□□ 0.88
HUWE1-201ENST00000218328 ARHGAP45Q92619 1136 aa20.55■□□□□ 0.88
HUWE1-201ENST00000218328 FAM135AQ9P2D6 1515 aa20.55■□□□□ 0.88
HUWE1-201ENST00000218328 PRKCSHP14314 528 aaPredicted RBP20.55■□□□□ 0.88
HUWE1-201ENST00000218328 GIMAP7Q8NHV1 300 aa20.55■□□□□ 0.88
HUWE1-201ENST00000218328 SLC5A1P13866 664 aa20.55■□□□□ 0.88
HUWE1-201ENST00000218328 SMARCC1Q92922 1105 aaPredicted RBP20.55■□□□□ 0.88
HUWE1-201ENST00000218328 ZSCAN16Q9H4T2 348 aaPredicted RBP20.55■□□□□ 0.88
HUWE1-201ENST00000218328 TMOD3Q9NYL9 352 aa20.55■□□□□ 0.88
HUWE1-201ENST00000218328 DESP17661 470 aa20.55■□□□□ 0.88
HUWE1-201ENST00000218328 TMEM266Q2M3C6 531 aa20.54■□□□□ 0.88
HUWE1-201ENST00000218328 FAM83GA6ND36 823 aa20.54■□□□□ 0.88
HUWE1-201ENST00000218328 TRERF1Q96PN7 1200 aa20.54■□□□□ 0.88
HUWE1-201ENST00000218328 MTIF2P46199 727 aaKnown RBP20.54■□□□□ 0.88
HUWE1-201ENST00000218328 ISM2Q6H9L7 571 aa20.54■□□□□ 0.88
HUWE1-201ENST00000218328 CATIPQ7Z7H3 387 aa20.54■□□□□ 0.88
HUWE1-201ENST00000218328 UBA5Q9GZZ9 404 aa20.54■□□□□ 0.88
HUWE1-201ENST00000218328 ZNF830Q96NB3 372 aaPredicted RBP20.53■□□□□ 0.88
HUWE1-201ENST00000218328 PANK2Q9BZ23 570 aa20.53■□□□□ 0.88
HUWE1-201ENST00000218328 DNMBPQ6XZF7 1577 aa20.53■□□□□ 0.88
HUWE1-201ENST00000218328 CCDC171Q6TFL3 1326 aa20.53■□□□□ 0.88
HUWE1-201ENST00000218328 CCDC102BQ68D86 513 aa20.53■□□□□ 0.88
HUWE1-201ENST00000218328 PIK3R4Q99570 1358 aa20.53■□□□□ 0.88
HUWE1-201ENST00000218328 NUTM2BA6NNL0 878 aaPredicted RBP20.53■□□□□ 0.88
HUWE1-201ENST00000218328 NUTM2EB1AL46 878 aaPredicted RBP20.53■□□□□ 0.88
HUWE1-201ENST00000218328 NUTM2AQ8IVF1 878 aaPredicted RBP20.53■□□□□ 0.88
HUWE1-201ENST00000218328 TTC21BQ7Z4L5 1316 aa20.53■□□□□ 0.88
HUWE1-201ENST00000218328 ZNF652Q9Y2D9 606 aa20.53■□□□□ 0.88
HUWE1-201ENST00000218328 IQGAP2Q13576 1575 aa20.52■□□□□ 0.88
HUWE1-201ENST00000218328 GNG11P61952 73 aa20.52■□□□□ 0.88
HUWE1-201ENST00000218328 C8orf34Q49A92 452 aa20.52■□□□□ 0.88
HUWE1-201ENST00000218328 MICALCLQ6ZW33 695 aa20.52■□□□□ 0.88
HUWE1-201ENST00000218328 ALS2CR12Q96Q35 445 aa20.52■□□□□ 0.88
HUWE1-201ENST00000218328 CNPY2Q9Y2B0 182 aa20.52■□□□□ 0.88
HUWE1-201ENST00000218328 ANKRD18BA2A2Z9 1011 aa20.52■□□□□ 0.88
HUWE1-201ENST00000218328 KIF20AO95235 890 aa20.52■□□□□ 0.88
HUWE1-201ENST00000218328 FAM107BQ9H098 131 aa20.52■□□□□ 0.88
HUWE1-201ENST00000218328 GOPCQ9HD26 462 aa20.52■□□□□ 0.88
HUWE1-201ENST00000218328 NOLC1Q14978 699 aaKnown RBP eCLIP20.52■□□□□ 0.885e-7■■□□□ 13.7
HUWE1-201ENST00000218328 TMEM67Q5HYA8 995 aa20.52■□□□□ 0.88
HUWE1-201ENST00000218328 ZNF444Q8N0Y2 327 aaPredicted RBP20.52■□□□□ 0.88
HUWE1-201ENST00000218328 SNX21Q969T3 373 aa20.52■□□□□ 0.88
HUWE1-201ENST00000218328 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.52■□□□□ 0.88
HUWE1-201ENST00000218328 KANK3Q6NY19 840 aa20.52■□□□□ 0.87
HUWE1-201ENST00000218328 DZIP1Q86YF9 867 aaKnown RBP20.52■□□□□ 0.87
HUWE1-201ENST00000218328 BCCIPQ9P287 314 aaKnown RBP eCLIP20.52■□□□□ 0.87
HUWE1-201ENST00000218328 TRMT112Q9UI30 125 aaKnown RBP20.52■□□□□ 0.87
HUWE1-201ENST00000218328 RNF187Q5TA31 235 aaPredicted RBP20.51■□□□□ 0.87
HUWE1-201ENST00000218328 USP48Q86UV5 1035 aa20.51■□□□□ 0.87
HUWE1-201ENST00000218328 NECAB1Q8N987 351 aa20.51■□□□□ 0.87
HUWE1-201ENST00000218328 RHPN1Q8TCX5 695 aa20.51■□□□□ 0.87
HUWE1-201ENST00000218328 CCDC91Q7Z6B0 441 aa20.51■□□□□ 0.87
HUWE1-201ENST00000218328 CCDC144CPQ8IYA2 1237 aa20.51■□□□□ 0.87
HUWE1-201ENST00000218328 PI4KAP2A4QPH2 592 aa20.51■□□□□ 0.87
HUWE1-201ENST00000218328 PI4KAP1Q8N8J0 262 aa20.51■□□□□ 0.87
HUWE1-201ENST00000218328 CCDC12Q8WUD4 166 aaPredicted RBP20.51■□□□□ 0.87
HUWE1-201ENST00000218328 NAA15Q9BXJ9 866 aaKnown RBP20.51■□□□□ 0.87
HUWE1-201ENST00000218328 HMGXB3Q12766 1538 aa20.51■□□□□ 0.87
HUWE1-201ENST00000218328 PPFIA3O75145 1194 aa20.51■□□□□ 0.87
HUWE1-201ENST00000218328 CTR9Q6PD62 1173 aa20.51■□□□□ 0.87
HUWE1-201ENST00000218328 KRI1Q8N9T8 703 aaKnown RBP20.51■□□□□ 0.87
HUWE1-201ENST00000218328 PODXL2Q9NZ53 605 aa20.51■□□□□ 0.87
HUWE1-201ENST00000218328 METAP2P50579 478 aaKnown RBP eCLIP20.5■□□□□ 0.871e-6■□□□□ 9.9
HUWE1-201ENST00000218328 HAND2P61296 217 aa20.5■□□□□ 0.87
HUWE1-201ENST00000218328 ZHX1Q9UKY1 873 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms