RNA–Protein interactions for RNA: ENSMUST00000115345.7

Syn1-202, Transcript of Synapsin-1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Syn1, Length 3,261 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1-202ENSMUST00000115345 FntaQ61239 377 aa17.1■□□□□ 0.33
Syn1-202ENSMUST00000115345 Prdm2A2A7B5 1709 aaKnown RBP17.1■□□□□ 0.33
Syn1-202ENSMUST00000115345 DnmbpQ6TXD4 1580 aa17.1■□□□□ 0.33
Syn1-202ENSMUST00000115345 Cep135Q6P5D4 1140 aa17.09■□□□□ 0.33
Syn1-202ENSMUST00000115345 Gdap1l1Q8VE33 370 aa17.09■□□□□ 0.33
Syn1-202ENSMUST00000115345 Odf2lQ9D478 642 aa17.09■□□□□ 0.33
Syn1-202ENSMUST00000115345 Calcoco2A2A6M5 331 aa17.09■□□□□ 0.33
Syn1-202ENSMUST00000115345 Zkscan1Q8BGS3 561 aaKnown RBP17.09■□□□□ 0.33
Syn1-202ENSMUST00000115345 Exosc9Q9JHI7 438 aaKnown RBP17.09■□□□□ 0.33
Syn1-202ENSMUST00000115345 Golga2Q921M4 999 aa17.09■□□□□ 0.33
Syn1-202ENSMUST00000115345 Ppp4r3bQ922R5 820 aa17.09■□□□□ 0.33
Syn1-202ENSMUST00000115345 Skint5A7XUY5 1461 aa17.09■□□□□ 0.33
Syn1-202ENSMUST00000115345 Hmx1O70218 332 aa17.08■□□□□ 0.33
Syn1-202ENSMUST00000115345 Rb1P13405 921 aa17.08■□□□□ 0.33
Syn1-202ENSMUST00000115345 Sgsm2Q80U12 1005 aa17.08■□□□□ 0.33
Syn1-202ENSMUST00000115345 Tspan18Q80WR1 248 aa17.08■□□□□ 0.33
Syn1-202ENSMUST00000115345 Stag1Q9D3E6 1258 aa17.08■□□□□ 0.33
Syn1-202ENSMUST00000115345 LnpkQ7TQ95 425 aa17.08■□□□□ 0.32
Syn1-202ENSMUST00000115345 Trim11Q99PQ2 467 aa17.08■□□□□ 0.32
Syn1-202ENSMUST00000115345 Cpsf2O35218 782 aaKnown RBP17.08■□□□□ 0.32
Syn1-202ENSMUST00000115345 Ddx42Q810A7 929 aaKnown RBP17.08■□□□□ 0.32
Syn1-202ENSMUST00000115345 Smc1bQ920F6 1248 aa17.08■□□□□ 0.32
Syn1-202ENSMUST00000115345 Akr1e2Q9DCT1 301 aa17.08■□□□□ 0.32
Syn1-202ENSMUST00000115345 Gadd45bP22339 160 aa17.07■□□□□ 0.32
Syn1-202ENSMUST00000115345 Cplx2P84086 134 aa17.07■□□□□ 0.32
Syn1-202ENSMUST00000115345 Znf532Q6NXK2 1036 aa17.07■□□□□ 0.32
Syn1-202ENSMUST00000115345 Fbxo18Q8K2I9 1042 aa17.07■□□□□ 0.32
Syn1-202ENSMUST00000115345 Thsd7aQ69ZU6 1645 aa17.07■□□□□ 0.32
Syn1-202ENSMUST00000115345 Rfx7F8VPJ6 1459 aa17.07■□□□□ 0.32
Syn1-202ENSMUST00000115345 Ap5z1Q3U829 807 aa17.07■□□□□ 0.32
Syn1-202ENSMUST00000115345 Sgsm3Q8VCZ6 750 aa17.07■□□□□ 0.32
Syn1-202ENSMUST00000115345 Bcl11bQ99PV8 884 aa17.07■□□□□ 0.32
Syn1-202ENSMUST00000115345 Pus7B7ZNL8 666 aaKnown RBP17.06■□□□□ 0.32
Syn1-202ENSMUST00000115345 Srpk2O54781 681 aaKnown RBP17.06■□□□□ 0.32
Syn1-202ENSMUST00000115345 Rps6ka3P18654 740 aaKnown RBP17.06■□□□□ 0.32
Syn1-202ENSMUST00000115345 Fhod1Q6P9Q4 1197 aa17.06■□□□□ 0.32
Syn1-202ENSMUST00000115345 Ankrd24Q80VM7 985 aa17.06■□□□□ 0.32
Syn1-202ENSMUST00000115345 Wdr3Q8BHB4 942 aaKnown RBP17.06■□□□□ 0.32
Syn1-202ENSMUST00000115345 Grik3B1AS29 919 aa17.06■□□□□ 0.32
Syn1-202ENSMUST00000115345 Zfp213E9QAW0 468 aa17.06■□□□□ 0.32
Syn1-202ENSMUST00000115345 Ccdc39Q9D5Y1 937 aa17.06■□□□□ 0.32
Syn1-202ENSMUST00000115345 Ttc21bQ0HA38 1315 aa17.06■□□□□ 0.32
Syn1-202ENSMUST00000115345 Hnrnph1O35737 449 aaKnown RBP17.06■□□□□ 0.32
Syn1-202ENSMUST00000115345 TfrcQ62351 763 aaKnown RBP17.06■□□□□ 0.32
Syn1-202ENSMUST00000115345 Tpm4Q6IRU2 248 aa17.06■□□□□ 0.32
Syn1-202ENSMUST00000115345 Cct8l1Q80YT3 562 aa17.06■□□□□ 0.32
Syn1-202ENSMUST00000115345 Spata1Q9D5R4 444 aa17.06■□□□□ 0.32
Syn1-202ENSMUST00000115345 Pmfbp1Q9WVQ0 1022 aa17.06■□□□□ 0.32
Syn1-202ENSMUST00000115345 Cdk13Q69ZA1 1511 aaKnown RBP17.05■□□□□ 0.32
Syn1-202ENSMUST00000115345 Map9Q3TRR0 646 aa17.05■□□□□ 0.32
Syn1-202ENSMUST00000115345 Tbc1d30Q69ZT9 766 aa17.05■□□□□ 0.32
Syn1-202ENSMUST00000115345 Casc1Q6TDU8 730 aa17.05■□□□□ 0.32
Syn1-202ENSMUST00000115345 Tpcn1Q9EQJ0 817 aa17.05■□□□□ 0.32
Syn1-202ENSMUST00000115345 Duxf3A0A0N4SV92 674 aa17.04■□□□□ 0.32
Syn1-202ENSMUST00000115345 Mtx1P47802 317 aa17.04■□□□□ 0.32
Syn1-202ENSMUST00000115345 Prdm10Q3UTQ7 1184 aa17.04■□□□□ 0.32
Syn1-202ENSMUST00000115345 Rbbp5Q8BX09 538 aaKnown RBP17.04■□□□□ 0.32
Syn1-202ENSMUST00000115345 CrbnQ8C7D2 445 aa17.04■□□□□ 0.32
Syn1-202ENSMUST00000115345 Naip7Q9JIB3 1402 aa17.04■□□□□ 0.32
Syn1-202ENSMUST00000115345 Cdk4P30285 303 aa17.04■□□□□ 0.32
Syn1-202ENSMUST00000115345 Mcm2P97310 904 aa17.04■□□□□ 0.32
Syn1-202ENSMUST00000115345 Spats2Q8K1N4 545 aaKnown RBP17.04■□□□□ 0.32
Syn1-202ENSMUST00000115345 Atl3Q91YH5 541 aa17.04■□□□□ 0.32
Syn1-202ENSMUST00000115345 Myo3aQ8K3H5 1613 aa17.04■□□□□ 0.32
Syn1-202ENSMUST00000115345 Ubap1lG3UW59 384 aa17.04■□□□□ 0.32
Syn1-202ENSMUST00000115345 Atl2Q6PA06 583 aa17.04■□□□□ 0.32
Syn1-202ENSMUST00000115345 Hnrnph2P70333 449 aaKnown RBP17.03■□□□□ 0.32
Syn1-202ENSMUST00000115345 Mns1Q61884 491 aa17.03■□□□□ 0.32
Syn1-202ENSMUST00000115345 Erlin2Q8BFZ9 340 aa17.03■□□□□ 0.32
Syn1-202ENSMUST00000115345 Kansl3A2RSY1 903 aaKnown RBP17.03■□□□□ 0.32
Syn1-202ENSMUST00000115345 Cnga1P29974 684 aa17.03■□□□□ 0.32
Syn1-202ENSMUST00000115345 Sycp1Q62209 993 aa17.03■□□□□ 0.32
Syn1-202ENSMUST00000115345 Znf704Q9ERQ3 566 aa17.03■□□□□ 0.32
Syn1-202ENSMUST00000115345 Zranb2Q9R020 330 aaKnown RBP17.03■□□□□ 0.32
Syn1-202ENSMUST00000115345 Cfap58B2RW38 873 aa17.02■□□□□ 0.32
Syn1-202ENSMUST00000115345 Pax3P24610 479 aa17.02■□□□□ 0.32
Syn1-202ENSMUST00000115345 Rab3gap1Q80UJ7 981 aa17.02■□□□□ 0.32
Syn1-202ENSMUST00000115345 Pank1Q8K4K6 548 aa17.02■□□□□ 0.32
Syn1-202ENSMUST00000115345 Pdzrn4E9PUZ9 1014 aa17.02■□□□□ 0.32
Syn1-202ENSMUST00000115345 Nf2P46662 596 aa17.02■□□□□ 0.32
Syn1-202ENSMUST00000115345 Elf1Q60775 612 aa17.02■□□□□ 0.32
Syn1-202ENSMUST00000115345 Ppp1r1bQ60829 194 aa17.02■□□□□ 0.32
Syn1-202ENSMUST00000115345 Rbm43Q99J64 343 aa17.02■□□□□ 0.32
Syn1-202ENSMUST00000115345 Tecpr2Q3UH45 1423 aa17.02■□□□□ 0.32
Syn1-202ENSMUST00000115345 Uggt1Q6P5E4 1551 aa17.02■□□□□ 0.31
Syn1-202ENSMUST00000115345 Nop14Q8R3N1 860 aaKnown RBP17.02■□□□□ 0.31
Syn1-202ENSMUST00000115345 Smc1aQ9CU62 1233 aaKnown RBP17.02■□□□□ 0.31
Syn1-202ENSMUST00000115345 Tfip11Q9ERA6 838 aaKnown RBP17.02■□□□□ 0.31
Syn1-202ENSMUST00000115345 Kifc2O08672 792 aa17.01■□□□□ 0.31
Syn1-202ENSMUST00000115345 Serpinb6Q60854 378 aa17.01■□□□□ 0.31
Syn1-202ENSMUST00000115345 AvenQ9D9K3 342 aa17.01■□□□□ 0.31
Syn1-202ENSMUST00000115345 Dusp9Q7TNL7 452 aa17.01■□□□□ 0.31
Syn1-202ENSMUST00000115345 Zfp446Q8C9M8 523 aa17.01■□□□□ 0.31
Syn1-202ENSMUST00000115345 Znf24Q91VN1 368 aa17.01■□□□□ 0.31
Syn1-202ENSMUST00000115345 Utp3Q9JI13 469 aaKnown RBP17.01■□□□□ 0.31
Syn1-202ENSMUST00000115345 Efcab6Q6P1E8 1516 aa17.01■□□□□ 0.31
Syn1-202ENSMUST00000115345 Cnbd1B1AWM0 430 aa17.01■□□□□ 0.31
Syn1-202ENSMUST00000115345 Mnat1P51949 309 aa17.01■□□□□ 0.31
Syn1-202ENSMUST00000115345 GorabQ8BRM2 368 aa17.01■□□□□ 0.31
Syn1-202ENSMUST00000115345 CrebrfQ8CDG5 640 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms