Protein–RNA interactions for Protein: Q80YT3

Cct8l1, Chaperonin-containing TCP1, subunit 8 (theta)-like 1, mousemouse

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cct8l1Q80YT3 Gm25239-201ENSMUST00000174915 86 ntBASIC40.22■■■■■ 4.03
Cct8l1Q80YT3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.07■■■■□ 3.52
Cct8l1Q80YT3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
Cct8l1Q80YT3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
Cct8l1Q80YT3 Gm15042-201ENSMUST00000120212 883 ntBASIC35.4■■■■□ 3.26
Cct8l1Q80YT3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Cct8l1Q80YT3 Gm24109-201ENSMUST00000175489 103 ntBASIC34.69■■■■□ 3.14
Cct8l1Q80YT3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
Cct8l1Q80YT3 Gm15045-201ENSMUST00000117359 883 ntBASIC34.61■■■■□ 3.13
Cct8l1Q80YT3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.55■■■■□ 3.12
Cct8l1Q80YT3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Cct8l1Q80YT3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
Cct8l1Q80YT3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.92■■■■□ 3.02
Cct8l1Q80YT3 Psd-208ENSMUST00000224556 2034 ntBASIC33.79■■■■□ 3
Cct8l1Q80YT3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.77■■■■□ 3
Cct8l1Q80YT3 Gm23366-201ENSMUST00000175022 89 ntBASIC33.66■■■□□ 2.98
Cct8l1Q80YT3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
Cct8l1Q80YT3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
Cct8l1Q80YT3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.22■■■□□ 2.91
Cct8l1Q80YT3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Cct8l1Q80YT3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.96■■■□□ 2.87
Cct8l1Q80YT3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Cct8l1Q80YT3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Cct8l1Q80YT3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.79■■■□□ 2.84
Cct8l1Q80YT3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.64■■■□□ 2.82
Cct8l1Q80YT3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.63■■■□□ 2.81
Cct8l1Q80YT3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
Cct8l1Q80YT3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Cct8l1Q80YT3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.51■■■□□ 2.79
Cct8l1Q80YT3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.44■■■□□ 2.78
Cct8l1Q80YT3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
Cct8l1Q80YT3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.13■■■□□ 2.73
Cct8l1Q80YT3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Cct8l1Q80YT3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.11■■■□□ 2.73
Cct8l1Q80YT3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Cct8l1Q80YT3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Cct8l1Q80YT3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.98■■■□□ 2.71
Cct8l1Q80YT3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Cct8l1Q80YT3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.94■■■□□ 2.7
Cct8l1Q80YT3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.83■■■□□ 2.69
Cct8l1Q80YT3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Cct8l1Q80YT3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Cct8l1Q80YT3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
Cct8l1Q80YT3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Cct8l1Q80YT3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Cct8l1Q80YT3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.67■■■□□ 2.66
Cct8l1Q80YT3 Gm25238-201ENSMUST00000174914 89 ntBASIC31.65■■■□□ 2.66
Cct8l1Q80YT3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Cct8l1Q80YT3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.42■■■□□ 2.62
Cct8l1Q80YT3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Cct8l1Q80YT3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Cct8l1Q80YT3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Cct8l1Q80YT3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Cct8l1Q80YT3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Cct8l1Q80YT3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Cct8l1Q80YT3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Cct8l1Q80YT3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.09■■■□□ 2.57
Cct8l1Q80YT3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.08■■■□□ 2.57
Cct8l1Q80YT3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.08■■■□□ 2.57
Cct8l1Q80YT3 Gm27325-201ENSMUST00000175467 74 ntBASIC31.06■■■□□ 2.56
Cct8l1Q80YT3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Cct8l1Q80YT3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Cct8l1Q80YT3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.55
Cct8l1Q80YT3 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.93■■■□□ 2.54
Cct8l1Q80YT3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Cct8l1Q80YT3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Cct8l1Q80YT3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.79■■■□□ 2.52
Cct8l1Q80YT3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.75■■■□□ 2.51
Cct8l1Q80YT3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Cct8l1Q80YT3 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.74■■■□□ 2.51
Cct8l1Q80YT3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.7■■■□□ 2.51
Cct8l1Q80YT3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Cct8l1Q80YT3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Cct8l1Q80YT3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.63■■■□□ 2.49
Cct8l1Q80YT3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Cct8l1Q80YT3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Cct8l1Q80YT3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Cct8l1Q80YT3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
Cct8l1Q80YT3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Cct8l1Q80YT3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Cct8l1Q80YT3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.55■■■□□ 2.48
Cct8l1Q80YT3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Cct8l1Q80YT3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
Cct8l1Q80YT3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Cct8l1Q80YT3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Cct8l1Q80YT3 Rab21-202ENSMUST00000218831 843 ntBASIC30.35■■■□□ 2.45
Cct8l1Q80YT3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.33■■■□□ 2.45
Cct8l1Q80YT3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Cct8l1Q80YT3 Gm25262-201ENSMUST00000174934 133 ntBASIC30.26■■■□□ 2.43
Cct8l1Q80YT3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Cct8l1Q80YT3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.24■■■□□ 2.43
Cct8l1Q80YT3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.24■■■□□ 2.43
Cct8l1Q80YT3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Cct8l1Q80YT3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.13■■■□□ 2.41
Cct8l1Q80YT3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Cct8l1Q80YT3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
Cct8l1Q80YT3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
Cct8l1Q80YT3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30■■■□□ 2.39
Cct8l1Q80YT3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC29.98■■■□□ 2.39
Cct8l1Q80YT3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 190 ms