Protein–RNA interactions for Protein: Q80WR1

Tspan18, Tetraspanin-18, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan18Q80WR1 Gm25239-201ENSMUST00000174915 86 ntBASIC40.96■■■■■ 4.15
Tspan18Q80WR1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.7■■■■□ 3.63
Tspan18Q80WR1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.31■■■■□ 3.56
Tspan18Q80WR1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
Tspan18Q80WR1 Gm15042-201ENSMUST00000120212 883 ntBASIC36.07■■■■□ 3.36
Tspan18Q80WR1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
Tspan18Q80WR1 Gm24109-201ENSMUST00000175489 103 ntBASIC35.38■■■■□ 3.25
Tspan18Q80WR1 Gm15045-201ENSMUST00000117359 883 ntBASIC35.31■■■■□ 3.24
Tspan18Q80WR1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.2■■■■□ 3.22
Tspan18Q80WR1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Tspan18Q80WR1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.6■■■■□ 3.13
Tspan18Q80WR1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
Tspan18Q80WR1 Gm23366-201ENSMUST00000175022 89 ntBASIC34.29■■■■□ 3.08
Tspan18Q80WR1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
Tspan18Q80WR1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
Tspan18Q80WR1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.87■■■■□ 3.01
Tspan18Q80WR1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
Tspan18Q80WR1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
Tspan18Q80WR1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.56■■■□□ 2.96
Tspan18Q80WR1 Psd-208ENSMUST00000224556 2034 ntBASIC33.5■■■□□ 2.95
Tspan18Q80WR1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
Tspan18Q80WR1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.38■■■□□ 2.93
Tspan18Q80WR1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.32■■■□□ 2.92
Tspan18Q80WR1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Tspan18Q80WR1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.21■■■□□ 2.91
Tspan18Q80WR1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.17■■■□□ 2.9
Tspan18Q80WR1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.14■■■□□ 2.9
Tspan18Q80WR1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.05■■■□□ 2.88
Tspan18Q80WR1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33■■■□□ 2.87
Tspan18Q80WR1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Tspan18Q80WR1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.66■■■□□ 2.82
Tspan18Q80WR1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.63■■■□□ 2.81
Tspan18Q80WR1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Tspan18Q80WR1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Tspan18Q80WR1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.46■■■□□ 2.79
Tspan18Q80WR1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Tspan18Q80WR1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Tspan18Q80WR1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
Tspan18Q80WR1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.27■■■□□ 2.76
Tspan18Q80WR1 Gm25238-201ENSMUST00000174914 89 ntBASIC32.24■■■□□ 2.75
Tspan18Q80WR1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Tspan18Q80WR1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.1■■■□□ 2.73
Tspan18Q80WR1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Tspan18Q80WR1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.69
Tspan18Q80WR1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Tspan18Q80WR1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Tspan18Q80WR1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Tspan18Q80WR1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.75■■■□□ 2.67
Tspan18Q80WR1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Tspan18Q80WR1 Gm27325-201ENSMUST00000175467 74 ntBASIC31.69■■■□□ 2.66
Tspan18Q80WR1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.68■■■□□ 2.66
Tspan18Q80WR1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.64■■■□□ 2.66
Tspan18Q80WR1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Tspan18Q80WR1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Tspan18Q80WR1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.45■■■□□ 2.63
Tspan18Q80WR1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Tspan18Q80WR1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.36■■■□□ 2.61
Tspan18Q80WR1 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.32■■■□□ 2.6
Tspan18Q80WR1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Tspan18Q80WR1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.29■■■□□ 2.6
Tspan18Q80WR1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
Tspan18Q80WR1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Tspan18Q80WR1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.25■■■□□ 2.59
Tspan18Q80WR1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Tspan18Q80WR1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Tspan18Q80WR1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Tspan18Q80WR1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Tspan18Q80WR1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Tspan18Q80WR1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
Tspan18Q80WR1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Tspan18Q80WR1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Tspan18Q80WR1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
Tspan18Q80WR1 Rab21-202ENSMUST00000218831 843 ntBASIC30.96■■■□□ 2.55
Tspan18Q80WR1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.88■■■□□ 2.53
Tspan18Q80WR1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.86■■■□□ 2.53
Tspan18Q80WR1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Tspan18Q80WR1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Tspan18Q80WR1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.81■■■□□ 2.52
Tspan18Q80WR1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Tspan18Q80WR1 Gm25262-201ENSMUST00000174934 133 ntBASIC30.79■■■□□ 2.52
Tspan18Q80WR1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Tspan18Q80WR1 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.76■■■□□ 2.51
Tspan18Q80WR1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
Tspan18Q80WR1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Tspan18Q80WR1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
Tspan18Q80WR1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Tspan18Q80WR1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Tspan18Q80WR1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.49■■■□□ 2.47
Tspan18Q80WR1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Tspan18Q80WR1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.41■■■□□ 2.46
Tspan18Q80WR1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Tspan18Q80WR1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Tspan18Q80WR1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Tspan18Q80WR1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.37■■■□□ 2.45
Tspan18Q80WR1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Tspan18Q80WR1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Tspan18Q80WR1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Tspan18Q80WR1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Tspan18Q80WR1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
Tspan18Q80WR1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.19■■■□□ 2.42
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms