Protein–RNA interactions for Protein: Q810A7

Ddx42, ATP-dependent RNA helicase DDX42, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42Q810A7 Gm25239-201ENSMUST00000174915 86 ntBASIC36.02■■■■□ 3.36
Ddx42Q810A7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.35■■■□□ 2.93
Ddx42Q810A7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Ddx42Q810A7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Ddx42Q810A7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Ddx42Q810A7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Ddx42Q810A7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
Ddx42Q810A7 Gm15042-201ENSMUST00000120212 883 ntBASIC31.41■■■□□ 2.62
Ddx42Q810A7 Psd-208ENSMUST00000224556 2034 ntBASIC31.41■■■□□ 2.62
Ddx42Q810A7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Ddx42Q810A7 Gm24109-201ENSMUST00000175489 103 ntBASIC31.27■■■□□ 2.6
Ddx42Q810A7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Ddx42Q810A7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Ddx42Q810A7 Gm15045-201ENSMUST00000117359 883 ntBASIC30.55■■■□□ 2.48
Ddx42Q810A7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
Ddx42Q810A7 Gm23366-201ENSMUST00000175022 89 ntBASIC30.21■■■□□ 2.43
Ddx42Q810A7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Ddx42Q810A7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Ddx42Q810A7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Ddx42Q810A7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Ddx42Q810A7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
Ddx42Q810A7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Ddx42Q810A7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Ddx42Q810A7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Ddx42Q810A7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Ddx42Q810A7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
Ddx42Q810A7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
Ddx42Q810A7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.43■■■□□ 2.3
Ddx42Q810A7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Ddx42Q810A7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Ddx42Q810A7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Ddx42Q810A7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Ddx42Q810A7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Ddx42Q810A7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Ddx42Q810A7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Ddx42Q810A7 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.22■■■□□ 2.27
Ddx42Q810A7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.17■■■□□ 2.26
Ddx42Q810A7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.08■■■□□ 2.25
Ddx42Q810A7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29■■■□□ 2.23
Ddx42Q810A7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
Ddx42Q810A7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Ddx42Q810A7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.88■■■□□ 2.21
Ddx42Q810A7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Ddx42Q810A7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
Ddx42Q810A7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Ddx42Q810A7 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Ddx42Q810A7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.19
Ddx42Q810A7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Ddx42Q810A7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.7■■■□□ 2.18
Ddx42Q810A7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.67■■■□□ 2.18
Ddx42Q810A7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Ddx42Q810A7 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.64■■■□□ 2.17
Ddx42Q810A7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Ddx42Q810A7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Ddx42Q810A7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.59■■■□□ 2.17
Ddx42Q810A7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Ddx42Q810A7 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28.55■■■□□ 2.16
Ddx42Q810A7 Gm25238-201ENSMUST00000174914 89 ntBASIC28.4■■■□□ 2.14
Ddx42Q810A7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
Ddx42Q810A7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.36■■■□□ 2.13
Ddx42Q810A7 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
Ddx42Q810A7 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Ddx42Q810A7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ddx42Q810A7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Ddx42Q810A7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
Ddx42Q810A7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.06■■■□□ 2.08
Ddx42Q810A7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.05■■■□□ 2.08
Ddx42Q810A7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Ddx42Q810A7 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
Ddx42Q810A7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
Ddx42Q810A7 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Ddx42Q810A7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.9■■■□□ 2.06
Ddx42Q810A7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
Ddx42Q810A7 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Ddx42Q810A7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Ddx42Q810A7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.86■■■□□ 2.05
Ddx42Q810A7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.83■■■□□ 2.05
Ddx42Q810A7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.04
Ddx42Q810A7 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.82■■■□□ 2.04
Ddx42Q810A7 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Ddx42Q810A7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Ddx42Q810A7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27.78■■■□□ 2.04
Ddx42Q810A7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.76■■■□□ 2.03
Ddx42Q810A7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
Ddx42Q810A7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.73■■■□□ 2.03
Ddx42Q810A7 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.7■■■□□ 2.03
Ddx42Q810A7 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.61■■■□□ 2.01
Ddx42Q810A7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Ddx42Q810A7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Ddx42Q810A7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.52■■■□□ 2
Ddx42Q810A7 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■■□□ 2
Ddx42Q810A7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Ddx42Q810A7 Gm25262-201ENSMUST00000174934 133 ntBASIC27.49■■□□□ 1.99
Ddx42Q810A7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Ddx42Q810A7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Ddx42Q810A7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Ddx42Q810A7 Gm27325-201ENSMUST00000175467 74 ntBASIC27.46■■□□□ 1.99
Ddx42Q810A7 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.45■■□□□ 1.99
Ddx42Q810A7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ddx42Q810A7 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms