RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Znf526Q8BI66 675 aa9.28□□□□□ -0.92
Trim40-201ENSMUST00000087158 Pdcl3Q8BVF2 240 aa9.28□□□□□ -0.92
Trim40-201ENSMUST00000087158 Tceal9Q9DD24 104 aa9.28□□□□□ -0.92
Trim40-201ENSMUST00000087158 Elp1Q7TT37 1333 aaKnown RBP9.28□□□□□ -0.92
Trim40-201ENSMUST00000087158 Map3k13Q1HKZ5 959 aa9.28□□□□□ -0.92
Trim40-201ENSMUST00000087158 Ankle2Q6P1H6 964 aa9.28□□□□□ -0.92
Trim40-201ENSMUST00000087158 Ddx60E9PZQ1 1711 aa9.27□□□□□ -0.92
Trim40-201ENSMUST00000087158 Erbb4Q61527 1308 aa9.27□□□□□ -0.93
Trim40-201ENSMUST00000087158 Ttll7A4Q9F0 912 aa9.27□□□□□ -0.93
Trim40-201ENSMUST00000087158 Grm8P47743 908 aa9.27□□□□□ -0.93
Trim40-201ENSMUST00000087158 Igfbp6P47880 238 aa9.27□□□□□ -0.93
Trim40-201ENSMUST00000087158 Rnf216P58283 853 aa9.27□□□□□ -0.93
Trim40-201ENSMUST00000087158 Tlr7P58681 1050 aa9.27□□□□□ -0.93
Trim40-201ENSMUST00000087158 Cers3Q1A3B0 383 aa9.26□□□□□ -0.93
Trim40-201ENSMUST00000087158 Zkscan2G3X952 960 aa9.26□□□□□ -0.93
Trim40-201ENSMUST00000087158 Slc39a6Q8C145 765 aa9.26□□□□□ -0.93
Trim40-201ENSMUST00000087158 Trim52Q8CDV4 233 aa9.26□□□□□ -0.93
Trim40-201ENSMUST00000087158 MypopQ8R4U1 393 aa9.26□□□□□ -0.93
Trim40-201ENSMUST00000087158 Lmbr1lQ9D1E5 489 aa9.26□□□□□ -0.93
Trim40-201ENSMUST00000087158 Bcl2l12Q9D3J3 255 aa9.26□□□□□ -0.93
Trim40-201ENSMUST00000087158 Cntnap1O54991 1385 aa9.26□□□□□ -0.93
Trim40-201ENSMUST00000087158 Shank2Q80Z38 1476 aa9.26□□□□□ -0.93
Trim40-201ENSMUST00000087158 Kat6bQ8BRB7 1872 aa9.26□□□□□ -0.93
Trim40-201ENSMUST00000087158 Crb1Q8VHS2 1405 aa9.26□□□□□ -0.93
Trim40-201ENSMUST00000087158 AU015836B2RUM3 263 aa9.25□□□□□ -0.93
Trim40-201ENSMUST00000087158 Cct4P80315 539 aaKnown RBP9.25□□□□□ -0.93
Trim40-201ENSMUST00000087158 Slc4a10Q5DTL9 1118 aa9.25□□□□□ -0.93
Trim40-201ENSMUST00000087158 Tnpo1Q8BFY9 898 aaKnown RBP9.25□□□□□ -0.93
Trim40-201ENSMUST00000087158 Mylk2Q8VCR8 613 aa9.25□□□□□ -0.93
Trim40-201ENSMUST00000087158 Ginm1Q91WR6 327 aa9.25□□□□□ -0.93
Trim40-201ENSMUST00000087158 Kif2cQ922S8 721 aa9.25□□□□□ -0.93
Trim40-201ENSMUST00000087158 Bcar3Q9QZK2 820 aa9.25□□□□□ -0.93
Trim40-201ENSMUST00000087158 Shank3Q4ACU6 1730 aa9.25□□□□□ -0.93
Trim40-201ENSMUST00000087158 Nhsl1Q8CAF4 1587 aa9.25□□□□□ -0.93
Trim40-201ENSMUST00000087158 Mst1rQ62190 1378 aa9.25□□□□□ -0.93
Trim40-201ENSMUST00000087158 Pdia3P27773 505 aaKnown RBP9.25□□□□□ -0.93
Trim40-201ENSMUST00000087158 VgfQ0VGU4 617 aa9.25□□□□□ -0.93
Trim40-201ENSMUST00000087158 Ccnl1Q52KE7 532 aaKnown RBP9.25□□□□□ -0.93
Trim40-201ENSMUST00000087158 Tgfb1i1Q62219 461 aa9.25□□□□□ -0.93
Trim40-201ENSMUST00000087158 Ptpdc1Q6NZK8 747 aa9.25□□□□□ -0.93
Trim40-201ENSMUST00000087158 Ppp6r3Q922D4 844 aa9.25□□□□□ -0.93
Trim40-201ENSMUST00000087158 MypnQ5DTJ9 1315 aa9.24□□□□□ -0.93
Trim40-201ENSMUST00000087158 Gm10093D3YYI8 482 aa9.24□□□□□ -0.93
Trim40-201ENSMUST00000087158 Hdac1O09106 482 aaKnown RBP9.24□□□□□ -0.93
Trim40-201ENSMUST00000087158 Nucb1Q02819 459 aaKnown RBP9.24□□□□□ -0.93
Trim40-201ENSMUST00000087158 Ddx58Q6Q899 926 aa9.24□□□□□ -0.93
Trim40-201ENSMUST00000087158 ApobrQ8VBT6 942 aa9.24□□□□□ -0.93
Trim40-201ENSMUST00000087158 Gtf2a1Q99PM3 378 aa9.24□□□□□ -0.93
Trim40-201ENSMUST00000087158 Phf14Q9D4H9 881 aa9.24□□□□□ -0.93
Trim40-201ENSMUST00000087158 Kif20aP97329 887 aa9.23□□□□□ -0.93
Trim40-201ENSMUST00000087158 Zbtb40Q6PCS8 1258 aa9.23□□□□□ -0.93
Trim40-201ENSMUST00000087158 Noc3lQ8VI84 807 aaKnown RBP9.23□□□□□ -0.93
Trim40-201ENSMUST00000087158 Abcc4E9Q236 1325 aa9.23□□□□□ -0.93
Trim40-201ENSMUST00000087158 Sik1Q60670 779 aa9.23□□□□□ -0.93
Trim40-201ENSMUST00000087158 Fnbp4Q6ZQ03 1031 aa9.23□□□□□ -0.93
Trim40-201ENSMUST00000087158 Ripor2Q80U16 1078 aa9.23□□□□□ -0.93
Trim40-201ENSMUST00000087158 Q9D2X8 372 aa9.23□□□□□ -0.93
Trim40-201ENSMUST00000087158 Zbtb7aO88939 569 aaKnown RBP9.22□□□□□ -0.93
Trim40-201ENSMUST00000087158 Exoc5Q3TPX4 708 aa9.22□□□□□ -0.93
Trim40-201ENSMUST00000087158 Ppip5k2Q6ZQB6 1129 aa9.22□□□□□ -0.93
Trim40-201ENSMUST00000087158 Pm20d1Q8C165 503 aa9.22□□□□□ -0.93
Trim40-201ENSMUST00000087158 Kiaa0232Q80U59 1396 aaKnown RBP9.22□□□□□ -0.93
Trim40-201ENSMUST00000087158 Lrp6O88572 1613 aa9.22□□□□□ -0.93
Trim40-201ENSMUST00000087158 Hspa2P17156 633 aa9.22□□□□□ -0.93
Trim40-201ENSMUST00000087158 Gm12185Q5NCB2 835 aa9.22□□□□□ -0.93
Trim40-201ENSMUST00000087158 Smg7Q5RJH6 1138 aaKnown RBP9.22□□□□□ -0.93
Trim40-201ENSMUST00000087158 Fkbp5Q64378 456 aa9.22□□□□□ -0.93
Trim40-201ENSMUST00000087158 GorabQ8BRM2 368 aa9.22□□□□□ -0.93
Trim40-201ENSMUST00000087158 Hdac6Q9Z2V5 1149 aa9.22□□□□□ -0.93
Trim40-201ENSMUST00000087158 Syde2E9PUP1 1314 aa9.21□□□□□ -0.93
Trim40-201ENSMUST00000087158 Hmox1P14901 289 aa9.21□□□□□ -0.94
Trim40-201ENSMUST00000087158 Nlrp9bQ66X22 1003 aa9.21□□□□□ -0.94
Trim40-201ENSMUST00000087158 Ankrd23Q812A3 306 aa9.21□□□□□ -0.94
Trim40-201ENSMUST00000087158 RestQ8VIG1 1082 aa9.21□□□□□ -0.94
Trim40-201ENSMUST00000087158 Cap2Q9CYT6 476 aa9.21□□□□□ -0.94
Trim40-201ENSMUST00000087158 Tfip11Q9ERA6 838 aaKnown RBP9.21□□□□□ -0.94
Trim40-201ENSMUST00000087158 Fer1l6E0CZ42 1862 aa9.21□□□□□ -0.94
Trim40-201ENSMUST00000087158 Ank1Q02357 1862 aa9.2□□□□□ -0.94
Trim40-201ENSMUST00000087158 Nav1Q8CH77 1875 aa9.2□□□□□ -0.94
Trim40-201ENSMUST00000087158 Tpx2A2APB8 745 aaKnown RBP9.2□□□□□ -0.94
Trim40-201ENSMUST00000087158 Ccdc129Q14B48 1034 aa9.2□□□□□ -0.94
Trim40-201ENSMUST00000087158 Soga3Q6NZL0 945 aa9.2□□□□□ -0.94
Trim40-201ENSMUST00000087158 Erc2Q6PH08 957 aa9.2□□□□□ -0.94
Trim40-201ENSMUST00000087158 Zbtb3Q91X45 518 aa9.2□□□□□ -0.94
Trim40-201ENSMUST00000087158 Col4a1P02463 1669 aa9.2□□□□□ -0.94
Trim40-201ENSMUST00000087158 Pa2g4P50580 394 aaKnown RBP9.2□□□□□ -0.94
Trim40-201ENSMUST00000087158 Vps33bP59016 617 aa9.2□□□□□ -0.94
Trim40-201ENSMUST00000087158 Gnat3Q3V3I2 354 aa9.2□□□□□ -0.94
Trim40-201ENSMUST00000087158 Rnf123Q5XPI3 1314 aa9.2□□□□□ -0.94
Trim40-201ENSMUST00000087158 Mast2Q60592 1734 aa9.19□□□□□ -0.94
Trim40-201ENSMUST00000087158 Catsper2A2ARP9 588 aa9.19□□□□□ -0.94
Trim40-201ENSMUST00000087158 Mcm4P49717 862 aa9.19□□□□□ -0.94
Trim40-201ENSMUST00000087158 Gtpbp6Q3U6U5 514 aa9.19□□□□□ -0.94
Trim40-201ENSMUST00000087158 Lrrc43Q3V0L5 667 aa9.19□□□□□ -0.94
Trim40-201ENSMUST00000087158 Gnl3lQ6PGG6 577 aaKnown RBP9.19□□□□□ -0.94
Trim40-201ENSMUST00000087158 1700010I14RikQ7TPG0 532 aa9.19□□□□□ -0.94
Trim40-201ENSMUST00000087158 Dcaf5Q80T85 946 aa9.19□□□□□ -0.94
Trim40-201ENSMUST00000087158 Jmjd4Q8BFT6 427 aa9.19□□□□□ -0.94
Trim40-201ENSMUST00000087158 Stard3nlQ9DCI3 235 aa9.19□□□□□ -0.94
Trim40-201ENSMUST00000087158 AK157302I3ITR1 129 aa9.19□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 41.1 ms