RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 HEM13P11353 328 aaKnown RBP2.6□□□□□ -1.99
snR48snR48 STE4P18851 423 aa2.6□□□□□ -1.99
snR48snR48 ACE2P21192 770 aa2.6□□□□□ -1.99
snR48snR48 ALG3P38179 458 aa2.6□□□□□ -1.99
snR48snR48 TDA9Q04545 1251 aa2.6□□□□□ -1.99
snR48snR48 ALG7P07286 448 aa2.59□□□□□ -1.99
snR48snR48 NCS6P53088 359 aa2.59□□□□□ -1.99
snR48snR48 EST2Q06163 884 aa2.59□□□□□ -1.99
snR48snR48 GLO3P38682 493 aaKnown RBP2.58□□□□□ -2
snR48snR48 PEX28P38848 579 aa2.58□□□□□ -2
snR48snR48 ZRG8P40021 1076 aa2.58□□□□□ -2
snR48snR48 QDR1P40475 563 aa2.58□□□□□ -2
snR48snR48 NOP1P15646 327 aaKnown RBP2.57□□□□□ -2
snR48snR48 HCA4P20448 770 aaKnown RBP2.57□□□□□ -2
snR48snR48 RSM26P47141 266 aa2.57□□□□□ -2
snR48snR48 NOC3Q07896 663 aaPredicted RBP2.57□□□□□ -2
snR48snR48 RRT14P40470 206 aa2.56□□□□□ -2
snR48snR48 URM1P40554 99 aaPredicted RBP2.56□□□□□ -2
snR48snR48 YGL140CP53120 1219 aa2.56□□□□□ -2
snR48snR48 VPS73P53142 486 aaKnown RBP2.56□□□□□ -2
snR48snR48 YHL017WP38745 532 aa2.55□□□□□ -2
snR48snR48 ACF4P47129 309 aa2.55□□□□□ -2
snR48snR48 TRM13Q12383 476 aa2.55□□□□□ -2
snR48snR48 RQC2Q12532 1038 aaKnown RBP2.55□□□□□ -2
snR48snR48 ADY2P25613 283 aa2.54□□□□□ -2
snR48snR48 SEC23P15303 768 aaKnown RBP2.53□□□□□ -2
snR48snR48 SQT1P35184 431 aa2.53□□□□□ -2
snR48snR48 YIL166CP40445 542 aa2.53□□□□□ -2
snR48snR48 MEP2P41948 499 aa2.53□□□□□ -2
snR48snR48 HFM1P51979 1187 aa2.53□□□□□ -2
snR48snR48 SPE1P08432 466 aa2.52□□□□□ -2.01
snR48snR48 ENA1P13587 1091 aa2.52□□□□□ -2.01
snR48snR48 GEF1P37020 779 aa2.52□□□□□ -2.01
snR48snR48 DAS1P47005 663 aa2.52□□□□□ -2.01
snR48snR48 GIS2P53849 153 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
snR48snR48 ENA2Q01896 1091 aa2.52□□□□□ -2.01
snR48snR48 ULP1Q02724 621 aa2.52□□□□□ -2.01
snR48snR48 CIR2Q08822 631 aa2.52□□□□□ -2.01
snR48snR48 ENA5Q12691 1091 aa2.52□□□□□ -2.01
snR48snR48 MET6P05694 767 aaKnown RBP2.51□□□□□ -2.01
snR48snR48 YER152CP10356 443 aa2.51□□□□□ -2.01
snR48snR48 UGA4P32837 571 aa2.51□□□□□ -2.01
snR48snR48 PRP40P33203 583 aaKnown RBP2.51□□□□□ -2.01
snR48snR48 ATG1P53104 897 aa2.51□□□□□ -2.01
snR48snR48 RGT2Q12300 763 aa2.51□□□□□ -2.01
snR48snR48 SAM37P50110 327 aa2.5□□□□□ -2.01
snR48snR48 MPS1P54199 764 aa2.5□□□□□ -2.01
snR48snR48 MRI1Q06489 411 aaKnown RBP2.5□□□□□ -2.01
snR48snR48 BI4P03879 638 aa2.49□□□□□ -2.01
snR48snR48 BAS1P22035 811 aa2.49□□□□□ -2.01
snR48snR48 CAD1P24813 409 aaKnown RBP2.49□□□□□ -2.01
snR48snR48 PPS1P38148 807 aa2.49□□□□□ -2.01
snR48snR48 RGD1P38339 666 aa2.49□□□□□ -2.01
snR48snR48 CIC1P38779 376 aaKnown RBP2.49□□□□□ -2.01
snR48snR48 ERG5P54781 538 aa2.49□□□□□ -2.01
snR48snR48 CDA1Q06702 301 aa2.49□□□□□ -2.01
snR48snR48 KAR2P16474 682 aaKnown RBP2.48□□□□□ -2.01
snR48snR48 SLX1P38324 304 aa2.48□□□□□ -2.01
snR48snR48 BNA3P47039 444 aaKnown RBP2.48□□□□□ -2.01
snR48snR48 YGR012WP53206 393 aa2.48□□□□□ -2.01
snR48snR48 XYL2Q07993 356 aa2.48□□□□□ -2.01
snR48snR48 ORC2P32833 620 aa2.47□□□□□ -2.01
snR48snR48 GPI13Q07830 1017 aa2.47□□□□□ -2.01
snR48snR48 ATG19P35193 415 aa2.46□□□□□ -2.02
snR48snR48 RIM13Q03792 727 aa2.46□□□□□ -2.02
snR48snR48 TAF13P11747 167 aa2.45□□□□□ -2.02
snR48snR48 CDC43P18898 376 aa2.45□□□□□ -2.02
snR48snR48 UGA2P38067 497 aa2.45□□□□□ -2.02
snR48snR48 YAP1801P38856 637 aa2.45□□□□□ -2.02
snR48snR48 RAT1Q02792 1006 aaKnown RBP2.45□□□□□ -2.02
snR48snR48 SEG1Q04279 960 aa2.45□□□□□ -2.02
snR48snR48 FRE5Q08908 694 aa2.45□□□□□ -2.02
snR48snR48 DED1P06634 604 aaKnown RBP2.44□□□□□ -2.02
snR48snR48 CCC2P38995 1004 aa2.44□□□□□ -2.02
snR48snR48 RSP5P39940 809 aaKnown RBP2.43□□□□□ -2.02
snR48snR48 PSP2P50109 593 aaKnown RBP2.43□□□□□ -2.02
snR48snR48 ADI1Q03677 179 aa2.43□□□□□ -2.02
snR48snR48 KAR5Q04746 504 aa2.43□□□□□ -2.02
snR48snR48 ACM1Q08981 209 aa2.43□□□□□ -2.02
snR48snR48 SSA4P22202 642 aaKnown RBP2.42□□□□□ -2.02
snR48snR48 LTP1P40347 161 aa2.42□□□□□ -2.02
snR48snR48 MTC3P53077 123 aa2.42□□□□□ -2.02
snR48snR48 SLU7Q02775 382 aaKnown RBP2.42□□□□□ -2.02
snR48snR48 WHI4Q07655 649 aaKnown RBP2.42□□□□□ -2.02
snR48snR48 UPC2Q12151 913 aa2.42□□□□□ -2.02
snR48snR48 THS1P04801 734 aaKnown RBP2.41□□□□□ -2.02
snR48snR48 KIN3P22209 435 aa2.41□□□□□ -2.02
snR48snR48 SLA2P33338 968 aa2.41□□□□□ -2.02
snR48snR48 APM1Q00776 475 aaPredicted RBP2.41□□□□□ -2.02
snR48snR48 YPL109CQ02981 657 aa2.41□□□□□ -2.02
snR48snR48 ADY4Q05955 493 aa2.41□□□□□ -2.02
snR48snR48 HSF1P10961 833 aa2.4□□□□□ -2.03
snR48snR48 MLS1P30952 554 aa2.4□□□□□ -2.03
snR48snR48 MKK2P32491 506 aa2.4□□□□□ -2.03
snR48snR48 GEM1P39722 662 aa2.4□□□□□ -2.03
snR48snR48 MXR1P40029 184 aa2.4□□□□□ -2.03
snR48snR48 ENT3P47160 408 aa2.4□□□□□ -2.03
snR48snR48 PTP1P25044 335 aa2.39□□□□□ -2.03
snR48snR48 STE14P32584 239 aa2.39□□□□□ -2.03
snR48snR48 DED81P38707 554 aaKnown RBP2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 45.6 ms