RNA–Protein interactions for RNA: YPL220W

RPL1A, Transcript of Ribosomal 60S subunit protein L1A, yeast

Gene RPL1A, Length 654 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL1A	YPL220W	NMD3	P38861	518 aa	Known RBP	4.03	□□□□□ -1.76
RPL1A	YPL220W	TAT2	P38967	592 aa		4.03	□□□□□ -1.76
RPL1A	YPL220W	GEM1	P39722	662 aa		4.03	□□□□□ -1.76
RPL1A	YPL220W	ATG16	Q03818	150 aa		4.03	□□□□□ -1.76
RPL1A	YPL220W	HDA2	Q06629	674 aa		4.03	□□□□□ -1.76
RPL1A	YPL220W	HXK1	P04806	485 aa	Known RBP	4.02	□□□□□ -1.77
RPL1A	YPL220W	YEF3	P16521	1044 aa	Known RBP	4.02	□□□□□ -1.77
RPL1A	YPL220W	BAS1	P22035	811 aa		4.02	□□□□□ -1.77
RPL1A	YPL220W	PAF1	P38351	445 aa		4.02	□□□□□ -1.77
RPL1A	YPL220W	FAA3	P39002	694 aa		4.02	□□□□□ -1.77
RPL1A	YPL220W	HUL4	P40985	892 aa		4.02	□□□□□ -1.77
RPL1A	YPL220W	YGR237C	P50089	785 aa		4.02	□□□□□ -1.77
RPL1A	YPL220W	RIM8	P53179	542 aa		4.02	□□□□□ -1.77
RPL1A	YPL220W	PEX8	P53248	589 aa		4.02	□□□□□ -1.77
RPL1A	YPL220W	GIR2	Q03768	265 aa	Predicted RBP	4.02	□□□□□ -1.77
RPL1A	YPL220W	ERR1	P0CX10	437 aa		4.01	□□□□□ -1.77
RPL1A	YPL220W	ERR2	P0CX11	437 aa		4.01	□□□□□ -1.77
RPL1A	YPL220W	ARE1	P25628	610 aa		4.01	□□□□□ -1.77
RPL1A	YPL220W	SHU2	P38957	223 aa		4.01	□□□□□ -1.77
RPL1A	YPL220W	YAR028W	P39548	234 aa		4.01	□□□□□ -1.77
RPL1A	YPL220W	PMT3	P47190	753 aa		4.01	□□□□□ -1.77
RPL1A	YPL220W	YGR053C	P53234	283 aa		4.01	□□□□□ -1.77
RPL1A	YPL220W	ESF2	P53743	316 aa	Known RBP	4.01	□□□□□ -1.77
RPL1A	YPL220W	TMA46	Q12000	345 aa	Known RBP	4.01	□□□□□ -1.77
RPL1A	YPL220W	TMA17	Q12513	150 aa		4.01	□□□□□ -1.77
RPL1A	YPL220W	NUP145	P49687	1317 aa		4	□□□□□ -1.77
RPL1A	YPL220W	CIT1	P00890	479 aa		4	□□□□□ -1.77
RPL1A	YPL220W	RPL8A	P17076	256 aa	Known RBP	4	□□□□□ -1.77
RPL1A	YPL220W	RET1	P22276	1149 aa	Known RBP	4	□□□□□ -1.77
RPL1A	YPL220W	MTC2	P34246	357 aa		4	□□□□□ -1.77
RPL1A	YPL220W	YBR184W	P38299	523 aa		4	□□□□□ -1.77
RPL1A	YPL220W	ENP1	P38333	483 aa	Known RBP	4	□□□□□ -1.77
RPL1A	YPL220W	YHL012W	P38709	493 aa		4	□□□□□ -1.77
RPL1A	YPL220W	NEM1	P38757	446 aa		4	□□□□□ -1.77
RPL1A	YPL220W	FOL2	P51601	243 aa	Known RBP	4	□□□□□ -1.77
RPL1A	YPL220W	YGR021W	P53212	290 aa		4	□□□□□ -1.77
RPL1A	YPL220W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4	□□□□□ -1.77	not detected
RPL1A	YPL220W	YLR257W	Q06146	321 aa	Known RBP	4	□□□□□ -1.77
RPL1A	YPL220W	YCS4	Q06156	1176 aa		4	□□□□□ -1.77
RPL1A	YPL220W	EAF1	Q06337	982 aa		4	□□□□□ -1.77
RPL1A	YPL220W	YOR378W	Q08902	515 aa		4	□□□□□ -1.77
RPL1A	YPL220W	SOD2	P00447	233 aa		3.99	□□□□□ -1.77
RPL1A	YPL220W	ATP4	P05626	244 aa		3.99	□□□□□ -1.77
RPL1A	YPL220W	SAM35	P14693	329 aa		3.99	□□□□□ -1.77
RPL1A	YPL220W	MSH2	P25847	964 aa		3.99	□□□□□ -1.77
RPL1A	YPL220W	HIR1	P32479	840 aa		3.99	□□□□□ -1.77
RPL1A	YPL220W	TOD6	P34219	525 aa		3.99	□□□□□ -1.77
RPL1A	YPL220W	YHR020W	P38708	688 aa	Known RBP	3.99	□□□□□ -1.77
RPL1A	YPL220W	MTR4	P47047	1073 aa	Known RBP	3.99	□□□□□ -1.77
RPL1A	YPL220W	ERP6	P53198	216 aa		3.99	□□□□□ -1.77
RPL1A	YPL220W	TFB2	Q02939	513 aa		3.99	□□□□□ -1.77
RPL1A	YPL220W	SND1	Q04007	877 aa		3.99	□□□□□ -1.77
RPL1A	YPL220W	NTG2	Q08214	380 aa		3.99	□□□□□ -1.77
RPL1A	YPL220W	RTT10	Q08924	1013 aa		3.99	□□□□□ -1.77
RPL1A	YPL220W	YPL277C	Q08989	487 aa		3.99	□□□□□ -1.77
RPL1A	YPL220W	CAN1	P04817	590 aa		3.98	□□□□□ -1.77
RPL1A	YPL220W	RPL8B	P29453	256 aa	Known RBP	3.98	□□□□□ -1.77
RPL1A	YPL220W	PRP40	P33203	583 aa	Known RBP	3.98	□□□□□ -1.77
RPL1A	YPL220W	MDL2	P33311	773 aa		3.98	□□□□□ -1.77
RPL1A	YPL220W	YKL069W	P36088	180 aa		3.98	□□□□□ -1.77
RPL1A	YPL220W	SNF7	P39929	240 aa	Known RBP	3.98	□□□□□ -1.77
RPL1A	YPL220W	TOS4	Q06266	489 aa		3.98	□□□□□ -1.77
RPL1A	YPL220W	FAP7	Q12055	197 aa	Predicted RBP	3.98	□□□□□ -1.77
RPL1A	YPL220W	RPS13	P05756	151 aa	Known RBP	3.97	□□□□□ -1.77
RPL1A	YPL220W	TOA1	P32773	286 aa		3.97	□□□□□ -1.77
RPL1A	YPL220W	AIM26	P32858	118 aa		3.97	□□□□□ -1.77
RPL1A	YPL220W	PEX6	P33760	1030 aa		3.97	□□□□□ -1.77
RPL1A	YPL220W	MRP8	P35719	219 aa		3.97	□□□□□ -1.77
RPL1A	YPL220W	HSV2	P50079	448 aa	Predicted RBP	3.97	□□□□□ -1.77
RPL1A	YPL220W	SNO2	P53823	222 aa		3.97	□□□□□ -1.77
RPL1A	YPL220W	NOG1	Q02892	647 aa	Known RBP	3.97	□□□□□ -1.77
RPL1A	YPL220W	UGO1	Q03327	502 aa		3.97	□□□□□ -1.77
RPL1A	YPL220W	UTP5	Q04177	643 aa	Known RBP	3.97	□□□□□ -1.77
RPL1A	YPL220W	RSA3	Q05942	220 aa	Known RBP	3.97	□□□□□ -1.77
RPL1A	YPL220W	ATG13	Q06628	738 aa		3.97	□□□□□ -1.77
RPL1A	YPL220W	MRL1	Q06815	381 aa		3.97	□□□□□ -1.77
RPL1A	YPL220W	YDL124W	Q07551	312 aa	Known RBP	3.97	□□□□□ -1.77
RPL1A	YPL220W	INH1	P01097	85 aa		3.96	□□□□□ -1.78
RPL1A	YPL220W	GCR1	P07261	785 aa		3.96	□□□□□ -1.78
RPL1A	YPL220W	MSH3	P25336	1018 aa		3.96	□□□□□ -1.78
RPL1A	YPL220W	MRS6	P32864	603 aa	Known RBP	3.96	□□□□□ -1.78
RPL1A	YPL220W	SQT1	P35184	431 aa		3.96	□□□□□ -1.78
RPL1A	YPL220W	BLI1	P35727	113 aa		3.96	□□□□□ -1.78
RPL1A	YPL220W	JNM1	P36224	373 aa		3.96	□□□□□ -1.78
RPL1A	YPL220W	HSE1	P38753	452 aa		3.96	□□□□□ -1.78
RPL1A	YPL220W	VID27	P40157	782 aa		3.96	□□□□□ -1.78
RPL1A	YPL220W	IRR1	P40541	1150 aa		3.96	□□□□□ -1.78
RPL1A	YPL220W	XKS1	P42826	600 aa		3.96	□□□□□ -1.78
RPL1A	YPL220W	YJR120W	P47157	116 aa		3.96	□□□□□ -1.78
RPL1A	YPL220W	YNR063W	P53749	607 aa		3.96	□□□□□ -1.78
RPL1A	YPL220W	UME1	Q03010	460 aa		3.96	□□□□□ -1.78
RPL1A	YPL220W	ADI1	Q03677	179 aa		3.96	□□□□□ -1.78
RPL1A	YPL220W	THI73	Q07904	523 aa		3.96	□□□□□ -1.78
RPL1A	YPL220W	HRK1	Q08732	759 aa	Known RBP	3.96	□□□□□ -1.78
RPL1A	YPL220W	LAP2	Q10740	671 aa		3.96	□□□□□ -1.78
RPL1A	YPL220W	ERP4	Q12450	207 aa		3.96	□□□□□ -1.78
RPL1A	YPL220W	GFD2	P25370	566 aa	Known RBP	3.95	□□□□□ -1.78
RPL1A	YPL220W	SCT1	P32784	759 aa		3.95	□□□□□ -1.78
RPL1A	YPL220W	PTH2	P34222	208 aa		3.95	□□□□□ -1.78
RPL1A	YPL220W	ATG14	P38270	344 aa		3.95	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms