RNA–Protein interactions for RNA: YNL251C

NRD1, Transcript of RNA-binding subunit of Nrd1 complex, yeast

Gene NRD1, Length 1,728 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NRD1	YNL251C	YMR114C	Q04471	368 aa	Known RBP	5.68	□□□□□ -1.5
NRD1	YNL251C	YLR326W	Q06170	240 aa	Known RBP	5.68	□□□□□ -1.5
NRD1	YNL251C	BDF2	Q07442	638 aa		5.68	□□□□□ -1.5
NRD1	YNL251C	RLP24	Q07915	199 aa	Known RBP	5.68	□□□□□ -1.5
NRD1	YNL251C	ALE1	Q08548	619 aa		5.68	□□□□□ -1.5
NRD1	YNL251C	YLL054C	Q12244	843 aa		5.68	□□□□□ -1.5
NRD1	YNL251C	RIB2	Q12362	591 aa	Known RBP	5.68	□□□□□ -1.5
NRD1	YNL251C	MVD1	P32377	396 aa	Known RBP	5.68	□□□□□ -1.5
NRD1	YNL251C	YBR062C	P38239	180 aa		5.68	□□□□□ -1.5
NRD1	YNL251C	AIP1	P46680	615 aa	Known RBP	5.68	□□□□□ -1.5
NRD1	YNL251C	BTN2	P53286	410 aa		5.68	□□□□□ -1.5
NRD1	YNL251C	GIR2	Q03768	265 aa	Predicted RBP	5.68	□□□□□ -1.5
NRD1	YNL251C	KRE28	Q04431	385 aa		5.68	□□□□□ -1.5
NRD1	YNL251C	EST2	Q06163	884 aa		5.68	□□□□□ -1.5
NRD1	YNL251C	CSC1	Q06538	782 aa		5.68	□□□□□ -1.5
NRD1	YNL251C	MET7	Q08645	548 aa		5.68	□□□□□ -1.5
NRD1	YNL251C	OSW1	Q08692	278 aa		5.68	□□□□□ -1.5
NRD1	YNL251C	SSF2	Q12153	453 aa	Predicted RBP	5.68	□□□□□ -1.5
NRD1	YNL251C	GET3	Q12154	354 aa	Known RBP	5.68	□□□□□ -1.5
NRD1	YNL251C	NFI1	Q12216	726 aa		5.68	□□□□□ -1.5
NRD1	YNL251C	MAM3	Q12296	706 aa		5.68	□□□□□ -1.5
NRD1	YNL251C	TY4B-H	P0C2J7	1802 aa		5.67	□□□□□ -1.5
NRD1	YNL251C	TY4B-J	P47024	1803 aa		5.67	□□□□□ -1.5
NRD1	YNL251C	SUP35	P05453	685 aa	Known RBP	5.67	□□□□□ -1.5
NRD1	YNL251C	PRT1	P06103	763 aa	Known RBP	5.67	□□□□□ -1.5
NRD1	YNL251C	GFA1	P14742	717 aa	Known RBP	5.67	□□□□□ -1.5
NRD1	YNL251C	SCJ1	P25303	377 aa		5.67	□□□□□ -1.5
NRD1	YNL251C	PHO87	P25360	923 aa		5.67	□□□□□ -1.5
NRD1	YNL251C	AKR1	P39010	764 aa		5.67	□□□□□ -1.5
NRD1	YNL251C	TIF4631	P39935	952 aa	Known RBP	5.67	□□□□□ -1.5
NRD1	YNL251C	GPD2	P41911	440 aa	Known RBP	5.67	□□□□□ -1.5
NRD1	YNL251C	TDA10	P42938	290 aa		5.67	□□□□□ -1.5
NRD1	YNL251C	UBP6	P43593	499 aa	Known RBP	5.67	□□□□□ -1.5
NRD1	YNL251C	SHE10	P53075	577 aa		5.67	□□□□□ -1.5
NRD1	YNL251C	VID30	P53076	958 aa		5.67	□□□□□ -1.5
NRD1	YNL251C	LSC2	P53312	427 aa		5.67	□□□□□ -1.5
NRD1	YNL251C	RPT6	Q01939	405 aa	Known RBP	5.67	□□□□□ -1.5
NRD1	YNL251C	USA1	Q03714	838 aa		5.67	□□□□□ -1.5
NRD1	YNL251C	SPP382	Q06411	708 aa	Predicted RBP	5.67	□□□□□ -1.5
NRD1	YNL251C	OPY2	Q06810	360 aa		5.67	□□□□□ -1.5
NRD1	YNL251C	SUB2	Q07478	446 aa	Known RBP	5.67	□□□□□ -1.5
NRD1	YNL251C	CIR2	Q08822	631 aa		5.67	□□□□□ -1.5
NRD1	YNL251C	DAS2	Q12084	232 aa		5.67	□□□□□ -1.5
NRD1	YNL251C	CHS5	Q12114	671 aa	Known RBP	5.67	□□□□□ -1.5
NRD1	YNL251C	NCA2	Q12374	616 aa		5.67	□□□□□ -1.5
NRD1	YNL251C	LAM4	P38800	1345 aa		5.67	□□□□□ -1.5
NRD1	YNL251C	YIL177C	P40434	1758 aa		5.66	□□□□□ -1.5
NRD1	YNL251C	YJL225C	P40889	1758 aa		5.66	□□□□□ -1.5
NRD1	YNL251C	VPS1	P21576	704 aa	Known RBP	5.66	□□□□□ -1.5
NRD1	YNL251C	SWI4	P25302	1093 aa	Known RBP	5.66	□□□□□ -1.5
NRD1	YNL251C	BMH2	P34730	273 aa	Known RBP	5.66	□□□□□ -1.5
NRD1	YNL251C	MET1	P36150	593 aa		5.66	□□□□□ -1.5
NRD1	YNL251C	SRL3	P36167	246 aa		5.66	□□□□□ -1.5
NRD1	YNL251C	GEF1	P37020	779 aa		5.66	□□□□□ -1.5
NRD1	YNL251C	CRG1	P38892	291 aa	RIP-Chip data	5.66	□□□□□ -1.5	not detected
NRD1	YNL251C	NUP60	P39705	539 aa		5.66	□□□□□ -1.5
NRD1	YNL251C	SEC27	P41811	889 aa	Known RBP	5.66	□□□□□ -1.5
NRD1	YNL251C	IES1	P43579	692 aa		5.66	□□□□□ -1.5
NRD1	YNL251C	VTC2	P43585	828 aa		5.66	□□□□□ -1.5
NRD1	YNL251C	BRO1	P48582	844 aa		5.66	□□□□□ -1.5
NRD1	YNL251C	UFD2	P54860	961 aa		5.66	□□□□□ -1.5
NRD1	YNL251C	YDR090C	Q03193	310 aa		5.66	□□□□□ -1.5
NRD1	YNL251C	RIO1	Q12196	484 aa	Known RBP	5.66	□□□□□ -1.5
NRD1	YNL251C	AI4	P03878	556 aa		5.65	□□□□□ -1.5
NRD1	YNL251C	BAS1	P22035	811 aa		5.65	□□□□□ -1.5
NRD1	YNL251C	ILV6	P25605	309 aa	Known RBP	5.65	□□□□□ -1.5
NRD1	YNL251C	APL1	P27351	700 aa		5.65	□□□□□ -1.5
NRD1	YNL251C	HIR1	P32479	840 aa		5.65	□□□□□ -1.5
NRD1	YNL251C	CBF2	P32504	956 aa		5.65	□□□□□ -1.5
NRD1	YNL251C	RTS1	P38903	757 aa		5.65	□□□□□ -1.5
NRD1	YNL251C	SCS2	P40075	244 aa	Known RBP	5.65	□□□□□ -1.5
NRD1	YNL251C	YNL320W	P42840	284 aa		5.65	□□□□□ -1.5
NRD1	YNL251C	IST1	P53843	298 aa	Predicted RBP	5.65	□□□□□ -1.5
NRD1	YNL251C	MEC3	Q02574	474 aa		5.65	□□□□□ -1.5
NRD1	YNL251C	VPS64	Q03944	604 aa		5.65	□□□□□ -1.5
NRD1	YNL251C	SPN1	Q06505	410 aa	Predicted RBP	5.65	□□□□□ -1.5
NRD1	YNL251C	ARR1	Q06596	294 aa		5.65	□□□□□ -1.5
NRD1	YNL251C	MPC54	Q08550	464 aa		5.65	□□□□□ -1.5
NRD1	YNL251C	CWC2	Q12046	339 aa	Predicted RBP	5.65	□□□□□ -1.5
NRD1	YNL251C	PTC5	Q12511	572 aa		5.65	□□□□□ -1.5
NRD1	YNL251C	ADE3	P07245	946 aa	Known RBP	5.65	□□□□□ -1.51
NRD1	YNL251C	SSA1	P10591	642 aa	Known RBP	5.65	□□□□□ -1.51
NRD1	YNL251C	SEC18	P18759	758 aa	Known RBP	5.65	□□□□□ -1.51
NRD1	YNL251C	PWP1	P21304	576 aa	Known RBP	5.65	□□□□□ -1.51
NRD1	YNL251C	REC107	P21651	314 aa		5.65	□□□□□ -1.51
NRD1	YNL251C	CDC48	P25694	835 aa	Known RBP	5.65	□□□□□ -1.51
NRD1	YNL251C	SIN4	P32259	974 aa		5.65	□□□□□ -1.51
NRD1	YNL251C	SSE1	P32589	693 aa	Known RBP	5.65	□□□□□ -1.51
NRD1	YNL251C	RER2	P35196	286 aa		5.65	□□□□□ -1.51
NRD1	YNL251C	UGA2	P38067	497 aa		5.65	□□□□□ -1.51
NRD1	YNL251C	SET2	P46995	733 aa	Known RBP	5.65	□□□□□ -1.51
NRD1	YNL251C	CCM1	P48237	864 aa	Predicted RBP	5.65	□□□□□ -1.51
NRD1	YNL251C	ATP25	Q03153	612 aa		5.65	□□□□□ -1.51
NRD1	YNL251C	HFD1	Q04458	532 aa		5.65	□□□□□ -1.51
NRD1	YNL251C	YPR097W	Q06839	1073 aa		5.65	□□□□□ -1.51
NRD1	YNL251C	PSR2	Q07949	397 aa		5.65	□□□□□ -1.51
NRD1	YNL251C	ZRT2	Q12436	422 aa		5.65	□□□□□ -1.51
NRD1	YNL251C	AIR2	Q12476	344 aa	Known RBP	5.65	□□□□□ -1.51
NRD1	YNL251C	LDB19	Q12502	818 aa		5.65	□□□□□ -1.51
NRD1	YNL251C	ENO2	P00925	437 aa	Known RBP	5.64	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms