RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A KIP1P28742 1111 aa5.18□□□□□ -1.58
YSF3YNL138W-A GPB2P39717 880 aa5.18□□□□□ -1.58
YSF3YNL138W-A CNN1P43618 361 aa5.18□□□□□ -1.58
YSF3YNL138W-A YJL045WP47052 634 aa5.18□□□□□ -1.58
YSF3YNL138W-A YGR053CP53234 283 aa5.18□□□□□ -1.58
YSF3YNL138W-A AOS1Q06624 347 aa5.18□□□□□ -1.58
YSF3YNL138W-A SBP1P10080 294 aaKnown RBP5.17□□□□□ -1.58
YSF3YNL138W-A DBP5P20449 482 aaKnown RBP5.17□□□□□ -1.58
YSF3YNL138W-A MLS1P30952 554 aa5.17□□□□□ -1.58
YSF3YNL138W-A LYP1P32487 611 aa5.17□□□□□ -1.58
YSF3YNL138W-A MOT2P34909 587 aaKnown RBP5.17□□□□□ -1.58
YSF3YNL138W-A CIT3P43635 486 aa5.17□□□□□ -1.58
YSF3YNL138W-A TYW3P53177 273 aa5.17□□□□□ -1.58
YSF3YNL138W-A RCM1P53972 490 aa5.17□□□□□ -1.58
YSF3YNL138W-A TIF35Q04067 274 aaKnown RBP5.17□□□□□ -1.58
YSF3YNL138W-A YVC1Q12324 675 aa5.17□□□□□ -1.58
YSF3YNL138W-A PRI2P20457 528 aa5.16□□□□□ -1.58
YSF3YNL138W-A YKR073CP36153 106 aa5.16□□□□□ -1.58
YSF3YNL138W-A YLR225CQ05948 407 aaKnown RBP5.16□□□□□ -1.58
YSF3YNL138W-A ESC2Q06340 456 aa5.16□□□□□ -1.58
YSF3YNL138W-A URN1Q06525 465 aaKnown RBP5.16□□□□□ -1.58
YSF3YNL138W-A HRK1Q08732 759 aaKnown RBP5.16□□□□□ -1.58
YSF3YNL138W-A CYC7P00045 113 aa5.15□□□□□ -1.59
YSF3YNL138W-A GCD1P09032 578 aaPredicted RBP5.15□□□□□ -1.59
YSF3YNL138W-A INO1P11986 533 aa5.15□□□□□ -1.59
YSF3YNL138W-A BAS1P22035 811 aa5.15□□□□□ -1.59
YSF3YNL138W-A PUF4P25339 888 aaKnown RBP RIP-Chip data5.15□□□□□ -1.59not detected
YSF3YNL138W-A MCM7P38132 845 aa5.15□□□□□ -1.59
YSF3YNL138W-A ALO1P54783 526 aaKnown RBP5.15□□□□□ -1.59
YSF3YNL138W-A FAL1Q12099 399 aaKnown RBP5.15□□□□□ -1.59
YSF3YNL138W-A SPO21Q12411 609 aa5.15□□□□□ -1.59
YSF3YNL138W-A ABD1P32783 436 aaPredicted RBP5.14□□□□□ -1.59
YSF3YNL138W-A YKL069WP36088 180 aa5.14□□□□□ -1.59
YSF3YNL138W-A RGD1P38339 666 aa5.14□□□□□ -1.59
YSF3YNL138W-A MPH1P40562 993 aa5.14□□□□□ -1.59
YSF3YNL138W-A OYE3P41816 400 aaPredicted RBP5.14□□□□□ -1.59
YSF3YNL138W-A OPI10Q08202 246 aa5.14□□□□□ -1.59
YSF3YNL138W-A YRF1-2P40105 1681 aa5.14□□□□□ -1.59
YSF3YNL138W-A YER152CP10356 443 aa5.13□□□□□ -1.59
YSF3YNL138W-A MED7Q08278 222 aa5.13□□□□□ -1.59
YSF3YNL138W-A YOR059CQ08448 450 aaKnown RBP5.13□□□□□ -1.59
YSF3YNL138W-A YSC84P32793 468 aa5.12□□□□□ -1.59
YSF3YNL138W-A SEA4P38164 1038 aa5.12□□□□□ -1.59
YSF3YNL138W-A TOS1P38288 455 aa5.12□□□□□ -1.59
YSF3YNL138W-A PEX7P39108 375 aa5.12□□□□□ -1.59
YSF3YNL138W-A HNT2P49775 206 aa5.12□□□□□ -1.59
YSF3YNL138W-A SDH1Q00711 640 aa5.12□□□□□ -1.59
YSF3YNL138W-A SPO20Q04359 397 aa5.12□□□□□ -1.59
YSF3YNL138W-A TRE1Q08919 783 aa5.12□□□□□ -1.59
YSF3YNL138W-A YPL260WQ08977 551 aa5.12□□□□□ -1.59
YSF3YNL138W-A YPL066WQ12194 479 aa5.12□□□□□ -1.59
YSF3YNL138W-A PDR11P40550 1411 aa5.12□□□□□ -1.59
YSF3YNL138W-A SAM35P14693 329 aa5.11□□□□□ -1.59
YSF3YNL138W-A YHL012WP38709 493 aa5.11□□□□□ -1.59
YSF3YNL138W-A YFL054CP43549 646 aa5.11□□□□□ -1.59
YSF3YNL138W-A YGL176CP46945 554 aa5.11□□□□□ -1.59
YSF3YNL138W-A RCL1Q08096 367 aaPredicted RBP5.11□□□□□ -1.59
YSF3YNL138W-A PRO1P32264 428 aa5.1□□□□□ -1.59
YSF3YNL138W-A OMA1P36163 345 aa5.1□□□□□ -1.59
YSF3YNL138W-A PTC7P38797 343 aa5.1□□□□□ -1.59
YSF3YNL138W-A CAT8P39113 1433 aa5.1□□□□□ -1.59
YSF3YNL138W-A GTS1P40956 396 aa5.1□□□□□ -1.59
YSF3YNL138W-A HOS3Q02959 697 aaKnown RBP5.1□□□□□ -1.59
YSF3YNL138W-A SSY1Q03770 852 aa5.1□□□□□ -1.59
YSF3YNL138W-A WRS1Q12109 432 aaKnown RBP5.1□□□□□ -1.59
YSF3YNL138W-A NSI1Q12457 570 aa5.1□□□□□ -1.59
YSF3YNL138W-A CTH1P47976 325 aa5.09□□□□□ -1.59
YSF3YNL138W-A TNA1P53322 534 aa5.09□□□□□ -1.59
YSF3YNL138W-A GNT1Q12096 491 aa5.09□□□□□ -1.59
YSF3YNL138W-A SSF2Q12153 453 aaPredicted RBP5.09□□□□□ -1.59
YSF3YNL138W-A RKM4Q12504 494 aa5.09□□□□□ -1.59
YSF3YNL138W-A SNF5P18480 905 aa5.08□□□□□ -1.6
YSF3YNL138W-A MDL2P33311 773 aa5.08□□□□□ -1.6
YSF3YNL138W-A YKL107WP34251 309 aa5.08□□□□□ -1.6
YSF3YNL138W-A TYS1P36421 394 aaKnown RBP5.08□□□□□ -1.6
YSF3YNL138W-A SPF1P39986 1215 aaKnown RBP5.08□□□□□ -1.6
YSF3YNL138W-A RPN3P40016 523 aaKnown RBP5.08□□□□□ -1.6
YSF3YNL138W-A MXR1P40029 184 aa5.08□□□□□ -1.6
YSF3YNL138W-A SPP382Q06411 708 aaPredicted RBP5.08□□□□□ -1.6
YSF3YNL138W-A TDA5Q06417 326 aaKnown RBP5.08□□□□□ -1.6
YSF3YNL138W-A BRE4Q07660 1125 aa5.08□□□□□ -1.6
YSF3YNL138W-A COQ4O13525 335 aa5.07□□□□□ -1.6
YSF3YNL138W-A RPL11AP0C0W9 174 aaKnown RBP5.07□□□□□ -1.6
YSF3YNL138W-A DBP2P24783 546 aaKnown RBP5.07□□□□□ -1.6
YSF3YNL138W-A ADP1P25371 1049 aa5.07□□□□□ -1.6
YSF3YNL138W-A GRX1P25373 110 aaKnown RBP5.07□□□□□ -1.6
YSF3YNL138W-A AGP1P25376 633 aa5.07□□□□□ -1.6
YSF3YNL138W-A SBA1P28707 216 aaKnown RBP5.07□□□□□ -1.6
YSF3YNL138W-A PUB1P32588 453 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
YSF3YNL138W-A LIP5P32875 414 aa5.07□□□□□ -1.6
YSF3YNL138W-A VBA5P36172 582 aa5.07□□□□□ -1.6
YSF3YNL138W-A MBP1P39678 833 aa5.07□□□□□ -1.6
YSF3YNL138W-A SIP5P40210 489 aaKnown RBP5.07□□□□□ -1.6
YSF3YNL138W-A INP52P50942 1183 aa5.07□□□□□ -1.6
YSF3YNL138W-A UBP3Q01477 912 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
YSF3YNL138W-A RPL11BQ3E757 174 aaPredicted RBP5.07□□□□□ -1.6
YSF3YNL138W-A PDR5P33302 1511 aaKnown RBP5.07□□□□□ -1.6
YSF3YNL138W-A SRO9P25567 434 aaKnown RBP5.06□□□□□ -1.6
YSF3YNL138W-A AIM26P32858 118 aa5.06□□□□□ -1.6
YSF3YNL138W-A MAC1P35192 417 aa5.06□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 10 ms