RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W AIM3P38266 947 aaKnown RBP6□□□□□ -1.45
ROT1YMR200W YFL054CP43549 646 aa6□□□□□ -1.45
ROT1YMR200W SPO21Q12411 609 aa6□□□□□ -1.45
ROT1YMR200W SNF5P18480 905 aa5.99□□□□□ -1.45
ROT1YMR200W PET112P33893 541 aa5.99□□□□□ -1.45
ROT1YMR200W BAP2P38084 609 aa5.99□□□□□ -1.45
ROT1YMR200W CRP1P38845 465 aaKnown RBP5.99□□□□□ -1.45
ROT1YMR200W NOC2P39744 710 aaKnown RBP5.99□□□□□ -1.45
ROT1YMR200W GIR2Q03768 265 aaPredicted RBP5.99□□□□□ -1.45
ROT1YMR200W COQ4O13525 335 aa5.98□□□□□ -1.45
ROT1YMR200W PHO8P11491 566 aa5.98□□□□□ -1.45
ROT1YMR200W PRP6P19735 899 aaPredicted RBP5.98□□□□□ -1.45
ROT1YMR200W SRM1P21827 482 aa5.98□□□□□ -1.45
ROT1YMR200W TRX2P22803 104 aaKnown RBP5.98□□□□□ -1.45
ROT1YMR200W GRX1P25373 110 aaKnown RBP5.98□□□□□ -1.45
ROT1YMR200W PWP2P25635 923 aaKnown RBP5.98□□□□□ -1.45
ROT1YMR200W TIM23P32897 222 aa5.98□□□□□ -1.45
ROT1YMR200W VPS24P36095 224 aaKnown RBP5.98□□□□□ -1.45
ROT1YMR200W FUI1P38196 639 aa5.98□□□□□ -1.45
ROT1YMR200W ENP1P38333 483 aaKnown RBP5.98□□□□□ -1.45
ROT1YMR200W RPT2P40327 437 aaKnown RBP5.98□□□□□ -1.45
ROT1YMR200W KRI1P42846 591 aaKnown RBP5.98□□□□□ -1.45
ROT1YMR200W HOS3Q02959 697 aaKnown RBP5.98□□□□□ -1.45
ROT1YMR200W NKP1Q12493 238 aa5.98□□□□□ -1.45
ROT1YMR200W SPS1P08458 490 aa5.97□□□□□ -1.45
ROT1YMR200W MNR2P35724 969 aa5.97□□□□□ -1.45
ROT1YMR200W VPS27P40343 622 aaKnown RBP5.97□□□□□ -1.45
ROT1YMR200W ENT3P47160 408 aa5.97□□□□□ -1.45
ROT1YMR200W TNA1P53322 534 aa5.97□□□□□ -1.45
ROT1YMR200W FOL1P53848 824 aa5.97□□□□□ -1.45
ROT1YMR200W COG4Q06096 861 aa5.97□□□□□ -1.45
ROT1YMR200W NBA1Q08229 501 aaKnown RBP5.97□□□□□ -1.45
ROT1YMR200W YPL260WQ08977 551 aa5.97□□□□□ -1.45
ROT1YMR200W THS1P04801 734 aaKnown RBP5.96□□□□□ -1.46
ROT1YMR200W RAD4P14736 754 aa5.96□□□□□ -1.46
ROT1YMR200W TOA1P32773 286 aa5.96□□□□□ -1.46
ROT1YMR200W ABZ1P37254 787 aaPredicted RBP5.96□□□□□ -1.46
ROT1YMR200W RPN3P40016 523 aaKnown RBP5.96□□□□□ -1.46
ROT1YMR200W TAF1P46677 1066 aa5.96□□□□□ -1.46
ROT1YMR200W TIM54P47045 478 aa5.96□□□□□ -1.46
ROT1YMR200W FOL2P51601 243 aaKnown RBP5.96□□□□□ -1.46
ROT1YMR200W PPM2Q08282 695 aa5.96□□□□□ -1.46
ROT1YMR200W YER152CP10356 443 aa5.95□□□□□ -1.46
ROT1YMR200W MRC1P25588 1096 aa5.95□□□□□ -1.46
ROT1YMR200W SYP1P25623 870 aaKnown RBP5.95□□□□□ -1.46
ROT1YMR200W RAD27P26793 382 aa5.95□□□□□ -1.46
ROT1YMR200W MLS1P30952 554 aa5.95□□□□□ -1.46
ROT1YMR200W CCZ1P38273 704 aa5.95□□□□□ -1.46
ROT1YMR200W TAT2P38967 592 aa5.95□□□□□ -1.46
ROT1YMR200W ESC8Q08119 714 aa5.95□□□□□ -1.46
ROT1YMR200W YLR125WQ12138 136 aa5.95□□□□□ -1.46
ROT1YMR200W DPB3P27344 201 aa5.94□□□□□ -1.46
ROT1YMR200W THI4P32318 326 aa5.94□□□□□ -1.46
ROT1YMR200W MFT1P33441 392 aaKnown RBP5.94□□□□□ -1.46
ROT1YMR200W RGD1P38339 666 aa5.94□□□□□ -1.46
ROT1YMR200W PIK1P39104 1066 aa5.94□□□□□ -1.46
ROT1YMR200W CNN1P43618 361 aa5.94□□□□□ -1.46
ROT1YMR200W SNO2P53823 222 aa5.94□□□□□ -1.46
ROT1YMR200W VMS1Q04311 632 aaKnown RBP5.94□□□□□ -1.46
ROT1YMR200W ENT2Q05785 613 aa5.94□□□□□ -1.46
ROT1YMR200W YPL277CQ08989 487 aa5.94□□□□□ -1.46
ROT1YMR200W DBP5P20449 482 aaKnown RBP5.93□□□□□ -1.46
ROT1YMR200W YCR015CP25616 317 aa5.93□□□□□ -1.46
ROT1YMR200W RER2P35196 286 aa5.93□□□□□ -1.46
ROT1YMR200W FLR1P38124 548 aa5.93□□□□□ -1.46
ROT1YMR200W MPH1P40562 993 aa5.93□□□□□ -1.46
ROT1YMR200W RIM8P53179 542 aa5.93□□□□□ -1.46
ROT1YMR200W NAN1Q02931 896 aaKnown RBP5.93□□□□□ -1.46
ROT1YMR200W HIF1Q12373 385 aa5.93□□□□□ -1.46
ROT1YMR200W PRI2P20457 528 aa5.92□□□□□ -1.46
ROT1YMR200W DUT1P33317 147 aa5.92□□□□□ -1.46
ROT1YMR200W CHZ1P40019 153 aaPredicted RBP5.92□□□□□ -1.46
ROT1YMR200W GDE1Q02979 1223 aa5.92□□□□□ -1.46
ROT1YMR200W SPO20Q04359 397 aa5.92□□□□□ -1.46
ROT1YMR200W TDA5Q06417 326 aaKnown RBP5.92□□□□□ -1.46
ROT1YMR200W NOP14Q99207 810 aaKnown RBP5.92□□□□□ -1.46
ROT1YMR200W SOD2P00447 233 aa5.91□□□□□ -1.46
ROT1YMR200W RPS13P05756 151 aaKnown RBP5.91□□□□□ -1.46
ROT1YMR200W RPN12P32496 274 aa5.91□□□□□ -1.46
ROT1YMR200W PAF1P38351 445 aa5.91□□□□□ -1.46
ROT1YMR200W PEX8P53248 589 aa5.91□□□□□ -1.46
ROT1YMR200W RSB1Q08417 382 aa5.91□□□□□ -1.46
ROT1YMR200W RTT10Q08924 1013 aa5.91□□□□□ -1.46
ROT1YMR200W ADR1P07248 1323 aa5.91□□□□□ -1.46
ROT1YMR200W PUF4P25339 888 aaKnown RBP RIP-Chip data5.9□□□□□ -1.46not detected
ROT1YMR200W TOD6P34219 525 aa5.9□□□□□ -1.46
ROT1YMR200W YKL222CP35995 705 aa5.9□□□□□ -1.46
ROT1YMR200W SEC26P41810 973 aaKnown RBP5.9□□□□□ -1.46
ROT1YMR200W IES1P43579 692 aa5.9□□□□□ -1.46
ROT1YMR200W YNR029CP53729 429 aaKnown RBP5.9□□□□□ -1.46
ROT1YMR200W SVL3Q03088 825 aaKnown RBP5.9□□□□□ -1.46
ROT1YMR200W TIF35Q04067 274 aaKnown RBP5.9□□□□□ -1.46
ROT1YMR200W YOR378WQ08902 515 aa5.9□□□□□ -1.46
ROT1YMR200W CYC1P00044 109 aaPredicted RBP5.89□□□□□ -1.47
ROT1YMR200W GIP4P39732 760 aa5.89□□□□□ -1.47
ROT1YMR200W FAA4P47912 694 aaKnown RBP5.89□□□□□ -1.47
ROT1YMR200W ESF2P53743 316 aaKnown RBP5.89□□□□□ -1.47
ROT1YMR200W ATG16Q03818 150 aa5.89□□□□□ -1.47
ROT1YMR200W YDR132CQ03900 495 aa5.89□□□□□ -1.47
ROT1YMR200W SLX4Q12098 748 aa5.89□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms