RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C SSB2P40150 613 aaKnown RBP8.43□□□□□ -1.06
ATG17YLR423C TNA1P53322 534 aa8.43□□□□□ -1.06
ATG17YLR423C TFB2Q02939 513 aa8.43□□□□□ -1.06
ATG17YLR423C PUS7Q08647 676 aaKnown RBP8.43□□□□□ -1.06
ATG17YLR423C GSY1P23337 708 aa8.42□□□□□ -1.06
ATG17YLR423C SFA1P32771 386 aa8.42□□□□□ -1.06
ATG17YLR423C SIT1P39980 628 aa8.42□□□□□ -1.06
ATG17YLR423C SBE2P42223 864 aaKnown RBP8.42□□□□□ -1.06
ATG17YLR423C LCD1Q04377 747 aa8.42□□□□□ -1.06
ATG17YLR423C COQ4O13525 335 aa8.41□□□□□ -1.06
ATG17YLR423C THS1P04801 734 aaKnown RBP8.41□□□□□ -1.06
ATG17YLR423C RPL8AP17076 256 aaKnown RBP8.41□□□□□ -1.06
ATG17YLR423C PRO1P32264 428 aa8.41□□□□□ -1.06
ATG17YLR423C YSC84P32793 468 aa8.41□□□□□ -1.06
ATG17YLR423C HLJ1P48353 224 aa8.41□□□□□ -1.06
ATG17YLR423C MTC5Q03897 1148 aa8.41□□□□□ -1.06
ATG17YLR423C UGA2P38067 497 aa8.4□□□□□ -1.06
ATG17YLR423C YEN1P40028 759 aa8.4□□□□□ -1.06
ATG17YLR423C ALT1P52893 592 aa8.4□□□□□ -1.06
ATG17YLR423C PHR1P05066 565 aaKnown RBP RIP-Chip data8.39□□□□□ -1.07not detected
ATG17YLR423C RAD53P22216 821 aa8.39□□□□□ -1.07
ATG17YLR423C UBP12P39538 1254 aa8.39□□□□□ -1.07
ATG17YLR423C ALG2P43636 503 aa8.39□□□□□ -1.07
ATG17YLR423C BUD9P53226 547 aa8.39□□□□□ -1.07
ATG17YLR423C CDC12P32468 407 aaKnown RBP8.38□□□□□ -1.07
ATG17YLR423C CCZ1P38273 704 aa8.38□□□□□ -1.07
ATG17YLR423C THI72Q08579 599 aa8.38□□□□□ -1.07
ATG17YLR423C SLA2P33338 968 aa8.37□□□□□ -1.07
ATG17YLR423C MAL11P53048 616 aa8.37□□□□□ -1.07
ATG17YLR423C YNR029CP53729 429 aaKnown RBP8.37□□□□□ -1.07
ATG17YLR423C AI3P03877 415 aa8.36□□□□□ -1.07
ATG17YLR423C CCM1P48237 864 aaPredicted RBP8.36□□□□□ -1.07
ATG17YLR423C ZDS1P50111 915 aaKnown RBP8.36□□□□□ -1.07
ATG17YLR423C MDM12Q92328 271 aa8.36□□□□□ -1.07
ATG17YLR423C REC104P33323 182 aa8.35□□□□□ -1.07
ATG17YLR423C YHL012WP38709 493 aa8.35□□□□□ -1.07
ATG17YLR423C YFL054CP43549 646 aa8.35□□□□□ -1.07
ATG17YLR423C EAR1Q03212 550 aa8.35□□□□□ -1.07
ATG17YLR423C HRQ1Q05549 1077 aa8.35□□□□□ -1.07
ATG17YLR423C MEF1P25039 761 aa8.34□□□□□ -1.07
ATG17YLR423C AKR1P39010 764 aa8.34□□□□□ -1.07
ATG17YLR423C TOK1P40310 691 aa8.34□□□□□ -1.07
ATG17YLR423C MMM1P41800 426 aa8.34□□□□□ -1.07
ATG17YLR423C YNL193WP53870 558 aa8.34□□□□□ -1.07
ATG17YLR423C TDA6Q06466 467 aa8.34□□□□□ -1.07
ATG17YLR423C ATG13Q06628 738 aa8.34□□□□□ -1.07
ATG17YLR423C RSB1Q08417 382 aa8.34□□□□□ -1.07
ATG17YLR423C VBA3P25594 458 aa8.33□□□□□ -1.08
ATG17YLR423C TRK2P28584 889 aa8.33□□□□□ -1.08
ATG17YLR423C NBA1Q08229 501 aaKnown RBP8.33□□□□□ -1.08
ATG17YLR423C NUP145P49687 1317 aa8.32□□□□□ -1.08
ATG17YLR423C SNF5P18480 905 aa8.32□□□□□ -1.08
ATG17YLR423C PIK1P39104 1066 aa8.32□□□□□ -1.08
ATG17YLR423C YJR008WP47085 338 aa8.32□□□□□ -1.08
ATG17YLR423C PMT3P47190 753 aa8.32□□□□□ -1.08
ATG17YLR423C NIT3P49954 291 aa8.32□□□□□ -1.08
ATG17YLR423C WHI3P34761 661 aaKnown RBP8.31□□□□□ -1.08
ATG17YLR423C ERT1P38140 529 aa8.31□□□□□ -1.08
ATG17YLR423C MCX1P38323 520 aaPredicted RBP8.31□□□□□ -1.08
ATG17YLR423C PRY1P47032 299 aa8.31□□□□□ -1.08
ATG17YLR423C ARI1P53111 347 aaKnown RBP8.31□□□□□ -1.08
ATG17YLR423C SDA1P53313 767 aaKnown RBP8.31□□□□□ -1.08
ATG17YLR423C NSG2P53898 299 aa8.31□□□□□ -1.08
ATG17YLR423C YLL058WQ12198 575 aa8.31□□□□□ -1.08
ATG17YLR423C BI4P03879 638 aa8.3□□□□□ -1.08
ATG17YLR423C YKL151CP36059 337 aa8.3□□□□□ -1.08
ATG17YLR423C CIT3P43635 486 aa8.3□□□□□ -1.08
ATG17YLR423C YGR237CP50089 785 aa8.3□□□□□ -1.08
ATG17YLR423C YPR196WQ06595 470 aa8.3□□□□□ -1.08
ATG17YLR423C MDM38Q08179 573 aa8.3□□□□□ -1.08
ATG17YLR423C YOR059CQ08448 450 aaKnown RBP8.3□□□□□ -1.08
ATG17YLR423C YVC1Q12324 675 aa8.3□□□□□ -1.08
ATG17YLR423C NPP1P25353 742 aa8.29□□□□□ -1.08
ATG17YLR423C SRO9P25567 434 aaKnown RBP8.29□□□□□ -1.08
ATG17YLR423C NAM7P30771 971 aaKnown RBP8.29□□□□□ -1.08
ATG17YLR423C MDL2P33311 773 aa8.29□□□□□ -1.08
ATG17YLR423C SPC29P33419 253 aa8.29□□□□□ -1.08
ATG17YLR423C MDJ1P35191 511 aa8.29□□□□□ -1.08
ATG17YLR423C BAP2P38084 609 aa8.29□□□□□ -1.08
ATG17YLR423C DAM1P53267 343 aa8.29□□□□□ -1.08
ATG17YLR423C RCL1Q08096 367 aaPredicted RBP8.29□□□□□ -1.08
ATG17YLR423C AFR1P33304 620 aa8.28□□□□□ -1.08
ATG17YLR423C YKR078WP36158 585 aaKnown RBP8.28□□□□□ -1.08
ATG17YLR423C YER158CP40095 573 aa8.28□□□□□ -1.08
ATG17YLR423C BUL2Q03758 920 aaKnown RBP8.28□□□□□ -1.08
ATG17YLR423C THI73Q07904 523 aa8.28□□□□□ -1.08
ATG17YLR423C CDC48P25694 835 aaKnown RBP8.27□□□□□ -1.09
ATG17YLR423C TAT1P38085 619 aa8.27□□□□□ -1.09
ATG17YLR423C GYP7P48365 746 aa8.27□□□□□ -1.09
ATG17YLR423C RCM1P53972 490 aa8.27□□□□□ -1.09
ATG17YLR423C NSI1Q12457 570 aa8.27□□□□□ -1.09
ATG17YLR423C CDC9P04819 755 aa8.26□□□□□ -1.09
ATG17YLR423C RAD18P10862 487 aa8.26□□□□□ -1.09
ATG17YLR423C RRT14P40470 206 aa8.26□□□□□ -1.09
ATG17YLR423C GYP8P43570 497 aa8.26□□□□□ -1.09
ATG17YLR423C UME1Q03010 460 aa8.26□□□□□ -1.09
ATG17YLR423C YDR514CQ04408 483 aa8.26□□□□□ -1.09
ATG17YLR423C SRD1P09007 221 aa8.25□□□□□ -1.09
ATG17YLR423C COQ2P32378 372 aa8.25□□□□□ -1.09
ATG17YLR423C EMC3P36039 253 aa8.25□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 46.1 ms