RNA–Protein interactions for RNA: YLR180W

SAM1, Transcript of S-adenosylmethionine synthetase, yeast

Gene SAM1, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAM1	YLR180W	CIT1	P00890	479 aa		10.88	□□□□□ -0.67
SAM1	YLR180W	KEX1	P09620	729 aa		10.88	□□□□□ -0.67
SAM1	YLR180W	TIF1	P10081	395 aa	Known RBP	10.88	□□□□□ -0.67
SAM1	YLR180W	RNR3	P21672	869 aa	Known RBP	10.88	□□□□□ -0.67
SAM1	YLR180W	FBP26	P32604	452 aa		10.88	□□□□□ -0.67
SAM1	YLR180W	CRD1	Q07560	283 aa		10.88	□□□□□ -0.67
SAM1	YLR180W	TSR3	Q12094	313 aa	Known RBP	10.88	□□□□□ -0.67
SAM1	YLR180W	NUM1	Q00402	2748 aa		10.87	□□□□□ -0.67
SAM1	YLR180W	COQ8	P27697	501 aa		10.87	□□□□□ -0.67
SAM1	YLR180W	BUD2	P33314	1104 aa		10.87	□□□□□ -0.67
SAM1	YLR180W	CTF18	P49956	741 aa		10.87	□□□□□ -0.67
SAM1	YLR180W	ZPR1	P53303	486 aa	Known RBP	10.87	□□□□□ -0.67
SAM1	YLR180W	UBP10	P53874	792 aa	Predicted RBP	10.87	□□□□□ -0.67
SAM1	YLR180W	ECM23	Q02710	187 aa		10.87	□□□□□ -0.67
SAM1	YLR180W	ELG1	Q12050	791 aa		10.87	□□□□□ -0.67
SAM1	YLR180W	PGA3	Q12746	312 aa	Known RBP	10.87	□□□□□ -0.67
SAM1	YLR180W	KEX2	P13134	814 aa		10.86	□□□□□ -0.67
SAM1	YLR180W	PRX1	P34227	261 aa	Known RBP	10.86	□□□□□ -0.67
SAM1	YLR180W	UBP11	P36026	717 aa		10.86	□□□□□ -0.67
SAM1	YLR180W	VID28	P40547	921 aa		10.86	□□□□□ -0.67
SAM1	YLR180W	ORC4	P54791	529 aa		10.86	□□□□□ -0.67
SAM1	YLR180W	OYE2	Q03558	400 aa	Known RBP	10.86	□□□□□ -0.67
SAM1	YLR180W	YPL150W	Q12152	901 aa		10.86	□□□□□ -0.67
SAM1	YLR180W	ADK2	P26364	225 aa		10.85	□□□□□ -0.67
SAM1	YLR180W	APM2	P38700	605 aa		10.85	□□□□□ -0.67
SAM1	YLR180W	IRC10	Q08118	586 aa		10.85	□□□□□ -0.67
SAM1	YLR180W	PGK1	P00560	416 aa	Known RBP	10.84	□□□□□ -0.67
SAM1	YLR180W	IMG2	P25642	146 aa	Predicted RBP	10.84	□□□□□ -0.67
SAM1	YLR180W	CDC48	P25694	835 aa	Known RBP	10.84	□□□□□ -0.67
SAM1	YLR180W	MMF1	P40185	145 aa	Known RBP	10.84	□□□□□ -0.67
SAM1	YLR180W	RSM25	P40496	264 aa		10.84	□□□□□ -0.67
SAM1	YLR180W	CIR1	P42940	261 aa		10.84	□□□□□ -0.67
SAM1	YLR180W	YFL052W	P43551	465 aa		10.84	□□□□□ -0.67
SAM1	YLR180W	ACF4	P47129	309 aa		10.84	□□□□□ -0.67
SAM1	YLR180W	GDE1	Q02979	1223 aa		10.84	□□□□□ -0.67
SAM1	YLR180W	YDR341C	Q05506	607 aa	Known RBP	10.84	□□□□□ -0.67
SAM1	YLR180W	PHM6	Q05637	104 aa		10.84	□□□□□ -0.67
SAM1	YLR180W	CPA2	P03965	1118 aa	Known RBP	10.83	□□□□□ -0.68
SAM1	YLR180W	MRPL7	P36519	292 aa		10.83	□□□□□ -0.68
SAM1	YLR180W	RFS1	P38234	210 aa	Known RBP	10.83	□□□□□ -0.68
SAM1	YLR180W	ESL1	P40456	1118 aa		10.83	□□□□□ -0.68
SAM1	YLR180W	YNL134C	P53912	376 aa	Known RBP	10.83	□□□□□ -0.68
SAM1	YLR180W	YLR407W	Q06070	228 aa		10.83	□□□□□ -0.68
SAM1	YLR180W	PEX19	Q07418	342 aa		10.83	□□□□□ -0.68
SAM1	YLR180W	STI1	P15705	589 aa	Known RBP RIP-Chip data	10.82	□□□□□ -0.68	not detected
SAM1	YLR180W	ESS1	P22696	170 aa		10.82	□□□□□ -0.68
SAM1	YLR180W	ELM1	P32801	640 aa		10.82	□□□□□ -0.68
SAM1	YLR180W	CCT3	P39077	534 aa	Known RBP	10.82	□□□□□ -0.68
SAM1	YLR180W	BUD6	P41697	788 aa		10.82	□□□□□ -0.68
SAM1	YLR180W	ALT2	P52892	507 aa		10.82	□□□□□ -0.68
SAM1	YLR180W	YGL081W	P53156	320 aa		10.82	□□□□□ -0.68
SAM1	YLR180W	ETT1	Q08421	412 aa	Known RBP	10.82	□□□□□ -0.68
SAM1	YLR180W	BET2	P20133	325 aa		10.81	□□□□□ -0.68
SAM1	YLR180W	EFT1	P32324	842 aa	Known RBP	10.81	□□□□□ -0.68
SAM1	YLR180W	YHL026C	P38740	315 aa		10.81	□□□□□ -0.68
SAM1	YLR180W	CCC2	P38995	1004 aa		10.81	□□□□□ -0.68
SAM1	YLR180W	YJL045W	P47052	634 aa		10.81	□□□□□ -0.68
SAM1	YLR180W	CNM67	P53865	581 aa	Known RBP	10.81	□□□□□ -0.68
SAM1	YLR180W	SGO1	Q08490	590 aa		10.81	□□□□□ -0.68
SAM1	YLR180W	PCD1	Q12524	340 aa		10.81	□□□□□ -0.68
SAM1	YLR180W	CBP3	P21560	335 aa		10.8	□□□□□ -0.68
SAM1	YLR180W	YTA12	P40341	825 aa		10.8	□□□□□ -0.68
SAM1	YLR180W	PIL1	P53252	339 aa	Known RBP	10.8	□□□□□ -0.68
SAM1	YLR180W	YGR273C	P53329	174 aa		10.8	□□□□□ -0.68
SAM1	YLR180W	HCR1	Q05775	265 aa	Known RBP	10.8	□□□□□ -0.68
SAM1	YLR180W	HIF1	Q12373	385 aa		10.8	□□□□□ -0.68
SAM1	YLR180W	MET6	P05694	767 aa	Known RBP	10.79	□□□□□ -0.68
SAM1	YLR180W	SNF1	P06782	633 aa	Known RBP	10.79	□□□□□ -0.68
SAM1	YLR180W	SIS1	P25294	352 aa	Known RBP	10.79	□□□□□ -0.68
SAM1	YLR180W	SRO9	P25567	434 aa	Known RBP	10.79	□□□□□ -0.68
SAM1	YLR180W	SEC21	P32074	935 aa	Known RBP	10.79	□□□□□ -0.68
SAM1	YLR180W	UBX7	P38349	436 aa		10.79	□□□□□ -0.68
SAM1	YLR180W	HXT5	P38695	592 aa		10.79	□□□□□ -0.68
SAM1	YLR180W	RVS167	P39743	482 aa	Known RBP	10.79	□□□□□ -0.68
SAM1	YLR180W	MOB1	P40484	314 aa		10.79	□□□□□ -0.68
SAM1	YLR180W	BIO5	P53744	561 aa	Known RBP	10.79	□□□□□ -0.68
SAM1	YLR180W	KRE33	P53914	1056 aa	Known RBP	10.79	□□□□□ -0.68
SAM1	YLR180W	FAR11	P53917	953 aa		10.79	□□□□□ -0.68
SAM1	YLR180W	WHI2	P12611	486 aa		10.78	□□□□□ -0.68
SAM1	YLR180W	PGI1	P12709	554 aa	Known RBP	10.78	□□□□□ -0.68
SAM1	YLR180W	MAK11	P20484	414 aa	Known RBP	10.78	□□□□□ -0.68
SAM1	YLR180W	RPN12	P32496	274 aa		10.78	□□□□□ -0.68
SAM1	YLR180W	PGM1	P33401	570 aa	Known RBP	10.78	□□□□□ -0.68
SAM1	YLR180W	CCT5	P40413	562 aa	Known RBP	10.78	□□□□□ -0.68
SAM1	YLR180W	GPD2	P41911	440 aa	Known RBP	10.78	□□□□□ -0.68
SAM1	YLR180W	BNI5	P53890	448 aa	Known RBP	10.78	□□□□□ -0.68
SAM1	YLR180W	YLR257W	Q06146	321 aa	Known RBP	10.78	□□□□□ -0.68
SAM1	YLR180W	SMD2	Q06217	110 aa	Known RBP	10.78	□□□□□ -0.68
SAM1	YLR180W	HFI1	Q12060	488 aa		10.78	□□□□□ -0.68
SAM1	YLR180W	TEL1	P38110	2787 aa		10.77	□□□□□ -0.68
SAM1	YLR180W	CAN1	P04817	590 aa		10.77	□□□□□ -0.69
SAM1	YLR180W	DED1	P06634	604 aa	Known RBP	10.77	□□□□□ -0.69
SAM1	YLR180W	KNS1	P32350	737 aa	Predicted RBP	10.77	□□□□□ -0.69
SAM1	YLR180W	ASF1	P32447	279 aa		10.77	□□□□□ -0.69
SAM1	YLR180W	BMH2	P34730	273 aa	Known RBP	10.77	□□□□□ -0.69
SAM1	YLR180W	MAL33	P38157	468 aa		10.77	□□□□□ -0.69
SAM1	YLR180W	RFC5	P38251	354 aa		10.77	□□□□□ -0.69
SAM1	YLR180W	YHR202W	P38887	602 aa		10.77	□□□□□ -0.69
SAM1	YLR180W	EAF5	P39995	279 aa		10.77	□□□□□ -0.69
SAM1	YLR180W	AIM33	Q04516	312 aa		10.77	□□□□□ -0.69

Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms