RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W LAP2Q10740 671 aa1.93□□□□□ -2.1
SLX4YLR135W YOR223WQ12015 292 aa1.93□□□□□ -2.1
SLX4YLR135W DED1P06634 604 aaKnown RBP1.92□□□□□ -2.1
SLX4YLR135W TIM23P32897 222 aa1.92□□□□□ -2.1
SLX4YLR135W ATF1P40353 525 aa1.92□□□□□ -2.1
SLX4YLR135W NUP82P40368 713 aa1.92□□□□□ -2.1
SLX4YLR135W TAF8Q03750 510 aa1.92□□□□□ -2.1
SLX4YLR135W UTP14Q04500 899 aaKnown RBP1.92□□□□□ -2.1
SLX4YLR135W YLR225CQ05948 407 aaKnown RBP1.92□□□□□ -2.1
SLX4YLR135W CIT1P00890 479 aa1.91□□□□□ -2.1
SLX4YLR135W CAN1P04817 590 aa1.91□□□□□ -2.1
SLX4YLR135W RPS13P05756 151 aaKnown RBP1.91□□□□□ -2.1
SLX4YLR135W PHO8P11491 566 aa1.91□□□□□ -2.1
SLX4YLR135W PUF4P25339 888 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
SLX4YLR135W SMY2P32909 740 aaKnown RBP1.91□□□□□ -2.1
SLX4YLR135W MOT2P34909 587 aaKnown RBP1.91□□□□□ -2.1
SLX4YLR135W RSP5P39940 809 aaKnown RBP1.91□□□□□ -2.1
SLX4YLR135W SIT1P39980 628 aa1.91□□□□□ -2.1
SLX4YLR135W RPN3P40016 523 aaKnown RBP1.91□□□□□ -2.1
SLX4YLR135W SIP5P40210 489 aaKnown RBP1.91□□□□□ -2.1
SLX4YLR135W YGL176CP46945 554 aa1.91□□□□□ -2.1
SLX4YLR135W YGL081WP53156 320 aa1.91□□□□□ -2.1
SLX4YLR135W YGR045CP53229 120 aa1.91□□□□□ -2.1
SLX4YLR135W YGR125WP53273 1036 aa1.91□□□□□ -2.1
SLX4YLR135W POB3Q04636 552 aaKnown RBP1.91□□□□□ -2.1
SLX4YLR135W RSA3Q05942 220 aaKnown RBP1.91□□□□□ -2.1
SLX4YLR135W YPL277CQ08989 487 aa1.91□□□□□ -2.1
SLX4YLR135W PTC5Q12511 572 aa1.91□□□□□ -2.1
SLX4YLR135W MET6P05694 767 aaKnown RBP1.91□□□□□ -2.1
SLX4YLR135W NNK1P36003 928 aa1.91□□□□□ -2.1
SLX4YLR135W MCM7P38132 845 aa1.91□□□□□ -2.1
SLX4YLR135W QNS1P38795 714 aaKnown RBP1.91□□□□□ -2.1
SLX4YLR135W HUL4P40985 892 aa1.91□□□□□ -2.1
SLX4YLR135W GUS1P46655 708 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
SLX4YLR135W TPO2P53283 614 aa1.91□□□□□ -2.1
SLX4YLR135W IOC4Q04213 475 aa1.91□□□□□ -2.1
SLX4YLR135W YMR074CQ04773 145 aa1.91□□□□□ -2.1
SLX4YLR135W EAF1Q06337 982 aa1.91□□□□□ -2.1
SLX4YLR135W AVO1Q08236 1176 aa1.91□□□□□ -2.1
SLX4YLR135W HRK1Q08732 759 aaKnown RBP1.91□□□□□ -2.1
SLX4YLR135W MLS1P30952 554 aa1.9□□□□□ -2.1
SLX4YLR135W HBS1P32769 611 aaKnown RBP1.9□□□□□ -2.1
SLX4YLR135W PNT1P38969 423 aa1.9□□□□□ -2.1
SLX4YLR135W ALT1P52893 592 aa1.9□□□□□ -2.1
SLX4YLR135W KIP3P53086 805 aaKnown RBP1.9□□□□□ -2.1
SLX4YLR135W NPL3Q01560 414 aaKnown RBP RIP-Chip data1.9□□□□□ -2.1not detected
SLX4YLR135W DOT1Q04089 582 aaKnown RBP1.9□□□□□ -2.1
SLX4YLR135W ALG6Q12001 544 aaKnown RBP1.9□□□□□ -2.1
SLX4YLR135W RET1P22276 1149 aaKnown RBP1.9□□□□□ -2.11
SLX4YLR135W ARE1P25628 610 aa1.9□□□□□ -2.11
SLX4YLR135W CDC11P32458 415 aa1.9□□□□□ -2.11
SLX4YLR135W BAP2P38084 609 aa1.9□□□□□ -2.11
SLX4YLR135W MNN1P39106 762 aa1.9□□□□□ -2.11
SLX4YLR135W MBP1P39678 833 aa1.9□□□□□ -2.11
SLX4YLR135W MSH4P40965 878 aaPredicted RBP1.9□□□□□ -2.11
SLX4YLR135W ALR2P43553 858 aa1.9□□□□□ -2.11
SLX4YLR135W ELA1P53861 379 aaPredicted RBP1.9□□□□□ -2.11
SLX4YLR135W YDL124WQ07551 312 aaKnown RBP1.9□□□□□ -2.11
SLX4YLR135W SPO21Q12411 609 aa1.9□□□□□ -2.11
SLX4YLR135W RPL11AP0C0W9 174 aaKnown RBP1.89□□□□□ -2.11
SLX4YLR135W ERR1P0CX10 437 aa1.89□□□□□ -2.11
SLX4YLR135W ERR2P0CX11 437 aa1.89□□□□□ -2.11
SLX4YLR135W YER152CP10356 443 aa1.89□□□□□ -2.11
SLX4YLR135W MSH2P25847 964 aa1.89□□□□□ -2.11
SLX4YLR135W KIP1P28742 1111 aa1.89□□□□□ -2.11
SLX4YLR135W BET3P36149 193 aa1.89□□□□□ -2.11
SLX4YLR135W RTA1P53047 317 aa1.89□□□□□ -2.11
SLX4YLR135W YNR063WP53749 607 aa1.89□□□□□ -2.11
SLX4YLR135W UGO1Q03327 502 aa1.89□□□□□ -2.11
SLX4YLR135W BUL2Q03758 920 aaKnown RBP1.89□□□□□ -2.11
SLX4YLR135W YLR257WQ06146 321 aaKnown RBP1.89□□□□□ -2.11
SLX4YLR135W YLL058WQ12198 575 aa1.89□□□□□ -2.11
SLX4YLR135W RPL11BQ3E757 174 aaPredicted RBP1.89□□□□□ -2.11
SLX4YLR135W THI4P32318 326 aa1.89□□□□□ -2.11
SLX4YLR135W CDC12P32468 407 aaKnown RBP1.89□□□□□ -2.11
SLX4YLR135W SLA2P33338 968 aa1.89□□□□□ -2.11
SLX4YLR135W GPT2P36148 743 aa1.89□□□□□ -2.11
SLX4YLR135W CCC2P38995 1004 aa1.89□□□□□ -2.11
SLX4YLR135W GEM1P39722 662 aa1.89□□□□□ -2.11
SLX4YLR135W YJL045WP47052 634 aa1.89□□□□□ -2.11
SLX4YLR135W YJR142WP47173 342 aa1.89□□□□□ -2.11
SLX4YLR135W MAL11P53048 616 aa1.89□□□□□ -2.11
SLX4YLR135W SPP382Q06411 708 aaPredicted RBP1.89□□□□□ -2.11
SLX4YLR135W UBX5Q06682 500 aa1.89□□□□□ -2.11
SLX4YLR135W PUS7Q08647 676 aaKnown RBP1.89□□□□□ -2.11
SLX4YLR135W ACM1Q08981 209 aa1.89□□□□□ -2.11
SLX4YLR135W YGR161W-CQ3E744 92 aa1.89□□□□□ -2.11
SLX4YLR135W HBN1Q96VH4 193 aa1.89□□□□□ -2.11
SLX4YLR135W THS1P04801 734 aaKnown RBP1.88□□□□□ -2.11
SLX4YLR135W SNF5P18480 905 aa1.88□□□□□ -2.11
SLX4YLR135W PRE10P21242 288 aaKnown RBP RIP-Chip data1.88□□□□□ -2.11not detected
SLX4YLR135W YSC84P32793 468 aa1.88□□□□□ -2.11
SLX4YLR135W PET10P36139 283 aa1.88□□□□□ -2.11
SLX4YLR135W UBP6P43593 499 aaKnown RBP1.88□□□□□ -2.11
SLX4YLR135W FOL2P51601 243 aaKnown RBP1.88□□□□□ -2.11
SLX4YLR135W SSY1Q03770 852 aa1.88□□□□□ -2.11
SLX4YLR135W MDM12Q92328 271 aa1.88□□□□□ -2.11
SLX4YLR135W NOP14Q99207 810 aaKnown RBP1.88□□□□□ -2.11
SLX4YLR135W DBP2P24783 546 aaKnown RBP1.87□□□□□ -2.11
SLX4YLR135W SRO9P25567 434 aaKnown RBP1.87□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 39.4 ms