RNA–Protein interactions for RNA: YKR024C

DBP7, Transcript of Putative ATP-dependent RNA helicase of the DEAD-box family, yeast

Gene DBP7, Length 2,229 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP7	YKR024C	GGA1	Q06336	557 aa		3.21	□□□□□ -1.89
DBP7	YKR024C	AUS1	Q08409	1394 aa		3.21	□□□□□ -1.89
DBP7	YKR024C	CAT8	P39113	1433 aa		3.21	□□□□□ -1.9
DBP7	YKR024C	SES1	P07284	462 aa	Known RBP	3.21	□□□□□ -1.9
DBP7	YKR024C	PRE9	P23638	258 aa	Known RBP	3.21	□□□□□ -1.9
DBP7	YKR024C	YME2	P32843	850 aa		3.21	□□□□□ -1.9
DBP7	YKR024C	NUF2	P33895	451 aa		3.21	□□□□□ -1.9
DBP7	YKR024C	LEM3	P42838	414 aa		3.21	□□□□□ -1.9
DBP7	YKR024C	JJJ1	P53863	590 aa		3.21	□□□□□ -1.9
DBP7	YKR024C	YNL165W	P53891	406 aa		3.21	□□□□□ -1.9
DBP7	YKR024C	UFD2	P54860	961 aa		3.21	□□□□□ -1.9
DBP7	YKR024C	ARO80	Q04052	950 aa		3.21	□□□□□ -1.9
DBP7	YKR024C	COG4	Q06096	861 aa		3.21	□□□□□ -1.9
DBP7	YKR024C	YDL121C	Q07541	149 aa		3.21	□□□□□ -1.9
DBP7	YKR024C	FLC1	Q08967	793 aa		3.21	□□□□□ -1.9
DBP7	YKR024C	GLE1	Q12315	538 aa		3.21	□□□□□ -1.9
DBP7	YKR024C	Q0182	Q9ZZW1	134 aa		3.21	□□□□□ -1.9
DBP7	YKR024C	RPO31	P04051	1460 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	GCR1	P07261	785 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	MRPL33	P20084	86 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	CLN2	P20438	545 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	RAD27	P26793	382 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	MLF3	P32047	452 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	ESL2	P36168	1195 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	ISW1	P38144	1129 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	RFC5	P38251	354 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	MSC7	P38694	644 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	3.2	□□□□□ -1.9	not detected
DBP7	YKR024C	SIT1	P39980	628 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	RTR1	P40084	226 aa	Predicted RBP	3.2	□□□□□ -1.9
DBP7	YKR024C	MPH1	P40562	993 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	CTK3	P46963	296 aa	Predicted RBP	3.2	□□□□□ -1.9
DBP7	YKR024C	PRY1	P47032	299 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	RTA1	P53047	317 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	FOX2	Q02207	900 aa	Known RBP	3.2	□□□□□ -1.9
DBP7	YKR024C	YPL034W	Q03083	165 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	MCA1	Q08601	432 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	SMC6	Q12749	1114 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	ESC1	Q03661	1658 aa	Known RBP	3.2	□□□□□ -1.9
DBP7	YKR024C	YML133C	Q03099	1374 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	YLL067C	Q07888	1374 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	YLL066C	Q99208	1374 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	CDC37	P06101	506 aa	Known RBP	3.2	□□□□□ -1.9
DBP7	YKR024C	RNR2	P09938	399 aa	Known RBP	3.2	□□□□□ -1.9
DBP7	YKR024C	PHO8	P11491	566 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	PEP7	P32609	515 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	BET3	P36149	193 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	SEA4	P38164	1038 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	NCL1	P38205	684 aa	Known RBP	3.2	□□□□□ -1.9
DBP7	YKR024C	ALG14	P38242	237 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	HXT13	P39924	564 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	AIM20	P40451	204 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	HXT17	P53631	564 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	HXT15	P54854	567 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	YPL109C	Q02981	657 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	OMS1	Q06668	471 aa		3.2	□□□□□ -1.9
DBP7	YKR024C	ARO1	P08566	1588 aa	Known RBP	3.2	□□□□□ -1.9
DBP7	YKR024C	YRF1-4	O13559	1382 aa		3.19	□□□□□ -1.9
DBP7	YKR024C	CAN1	P04817	590 aa		3.19	□□□□□ -1.9
DBP7	YKR024C	YEF3	P16521	1044 aa	Known RBP	3.19	□□□□□ -1.9
DBP7	YKR024C	VMA4	P22203	233 aa	Known RBP	3.19	□□□□□ -1.9
DBP7	YKR024C	MCM5	P29496	775 aa	Known RBP	3.19	□□□□□ -1.9
DBP7	YKR024C	RAD16	P31244	790 aa		3.19	□□□□□ -1.9
DBP7	YKR024C	MKK2	P32491	506 aa		3.19	□□□□□ -1.9
DBP7	YKR024C	ELM1	P32801	640 aa		3.19	□□□□□ -1.9
DBP7	YKR024C	RRP1	P35178	278 aa	Predicted RBP	3.19	□□□□□ -1.9
DBP7	YKR024C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
DBP7	YKR024C	HEL1	P36113	551 aa		3.19	□□□□□ -1.9
DBP7	YKR024C	RGD1	P38339	666 aa		3.19	□□□□□ -1.9
DBP7	YKR024C	SPT8	P38915	602 aa		3.19	□□□□□ -1.9
DBP7	YKR024C	SSL2	Q00578	843 aa		3.19	□□□□□ -1.9
DBP7	YKR024C	INP2	Q03824	705 aa		3.19	□□□□□ -1.9
DBP7	YKR024C	AOS1	Q06624	347 aa		3.19	□□□□□ -1.9
DBP7	YKR024C	BRE1	Q07457	700 aa	Known RBP	3.19	□□□□□ -1.9
DBP7	YKR024C	YGR161W-C	Q3E744	92 aa		3.19	□□□□□ -1.9
DBP7	YKR024C	TY4A-H	Q6Q5P6	413 aa		3.19	□□□□□ -1.9
DBP7	YKR024C	IQG1	Q12280	1495 aa		3.19	□□□□□ -1.9
DBP7	YKR024C	PSK1	P31374	1356 aa		3.19	□□□□□ -1.9
DBP7	YKR024C	GAL11	P19659	1081 aa		3.19	□□□□□ -1.9
DBP7	YKR024C	CLN1	P20437	546 aa		3.19	□□□□□ -1.9
DBP7	YKR024C	STE11	P23561	717 aa		3.19	□□□□□ -1.9
DBP7	YKR024C	BRF1	P29056	596 aa		3.19	□□□□□ -1.9
DBP7	YKR024C	GCD6	P32501	712 aa	Known RBP	3.19	□□□□□ -1.9
DBP7	YKR024C	NPR3	P38742	1146 aa		3.19	□□□□□ -1.9
DBP7	YKR024C	SEC9	P40357	651 aa		3.19	□□□□□ -1.9
DBP7	YKR024C	CCT5	P40413	562 aa	Known RBP	3.19	□□□□□ -1.9
DBP7	YKR024C	INP52	P50942	1183 aa		3.19	□□□□□ -1.9
DBP7	YKR024C	SUT1	P53032	299 aa	Known RBP	3.19	□□□□□ -1.9
DBP7	YKR024C	HOT1	Q03213	719 aa		3.19	□□□□□ -1.9
DBP7	YKR024C	VMS1	Q04311	632 aa	Known RBP	3.19	□□□□□ -1.9
DBP7	YKR024C	NKP2	Q06162	153 aa		3.19	□□□□□ -1.9
DBP7	YKR024C	UTP4	Q06679	776 aa	Known RBP	3.19	□□□□□ -1.9
DBP7	YKR024C	CMS1	Q07897	291 aa	Known RBP	3.19	□□□□□ -1.9
DBP7	YKR024C	NTG2	Q08214	380 aa		3.19	□□□□□ -1.9
DBP7	YKR024C	ATG9	Q12142	997 aa		3.19	□□□□□ -1.9
DBP7	YKR024C	SWI6	P09959	803 aa		3.18	□□□□□ -1.9
DBP7	YKR024C	THR4	P16120	514 aa	Known RBP	3.18	□□□□□ -1.9
DBP7	YKR024C	VMA3	P25515	160 aa		3.18	□□□□□ -1.9
DBP7	YKR024C	EFB1	P32471	206 aa	Known RBP	3.18	□□□□□ -1.9
DBP7	YKR024C	SCD5	P34758	872 aa		3.18	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 102.5 ms