RNA–Protein interactions for RNA: YKL180W

RPL17A, Transcript of Ribosomal 60S subunit protein L17A, yeast

Gene RPL17A, Length 555 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL17A	YKL180W	SNO2	P53823	222 aa		4.68	□□□□□ -1.66
RPL17A	YKL180W	SHE9	Q04172	456 aa		4.68	□□□□□ -1.66
RPL17A	YKL180W	YDL177C	Q12257	170 aa		4.68	□□□□□ -1.66
RPL17A	YKL180W	KIN2	P13186	1147 aa	Known RBP	4.67	□□□□□ -1.66
RPL17A	YKL180W	RNQ1	P25367	405 aa		4.67	□□□□□ -1.66
RPL17A	YKL180W	ABZ1	P37254	787 aa	Predicted RBP	4.67	□□□□□ -1.66
RPL17A	YKL180W	SPF1	P39986	1215 aa	Known RBP	4.67	□□□□□ -1.66
RPL17A	YKL180W	TY1B-DR4	Q07793	1604 aa		4.67	□□□□□ -1.66
RPL17A	YKL180W	CYC1	P00044	109 aa	Predicted RBP	4.66	□□□□□ -1.66
RPL17A	YKL180W	ACE2	P21192	770 aa		4.66	□□□□□ -1.66
RPL17A	YKL180W	MRP8	P35719	219 aa		4.66	□□□□□ -1.66
RPL17A	YKL180W	SAH1	P39954	449 aa	Known RBP	4.66	□□□□□ -1.66
RPL17A	YKL180W	NIT1	P40447	199 aa		4.66	□□□□□ -1.66
RPL17A	YKL180W	RRT14	P40470	206 aa		4.66	□□□□□ -1.66
RPL17A	YKL180W	ATG13	Q06628	738 aa		4.66	□□□□□ -1.66
RPL17A	YKL180W	SSF2	Q12153	453 aa	Predicted RBP	4.66	□□□□□ -1.66
RPL17A	YKL180W	CMP2	P14747	604 aa		4.65	□□□□□ -1.67
RPL17A	YKL180W	ELM1	P32801	640 aa		4.65	□□□□□ -1.67
RPL17A	YKL180W	PBY1	P38254	753 aa		4.65	□□□□□ -1.67
RPL17A	YKL180W	IRR1	P40541	1150 aa		4.65	□□□□□ -1.67
RPL17A	YKL180W	IRC24	P40580	263 aa		4.65	□□□□□ -1.67
RPL17A	YKL180W	SRP1	Q02821	542 aa	Known RBP	4.65	□□□□□ -1.67
RPL17A	YKL180W	YBR184W	P38299	523 aa		4.64	□□□□□ -1.67
RPL17A	YKL180W	ROT1	Q03691	256 aa		4.64	□□□□□ -1.67
RPL17A	YKL180W	DUS3	Q06053	668 aa	Known RBP	4.64	□□□□□ -1.67
RPL17A	YKL180W	SGD1	Q06132	899 aa		4.64	□□□□□ -1.67
RPL17A	YKL180W	YDR306C	Q06640	478 aa		4.64	□□□□□ -1.67
RPL17A	YKL180W	CDA2	Q06703	312 aa		4.64	□□□□□ -1.67
RPL17A	YKL180W	STE5	P32917	917 aa		4.63	□□□□□ -1.67
RPL17A	YKL180W	TSA1	P34760	196 aa	Known RBP	4.63	□□□□□ -1.67
RPL17A	YKL180W	YKL151C	P36059	337 aa		4.63	□□□□□ -1.67
RPL17A	YKL180W	AIM3	P38266	947 aa	Known RBP	4.63	□□□□□ -1.67
RPL17A	YKL180W	HFM1	P51979	1187 aa		4.63	□□□□□ -1.67
RPL17A	YKL180W	HRQ1	Q05549	1077 aa		4.63	□□□□□ -1.67
RPL17A	YKL180W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
RPL17A	YKL180W	OSW2	Q12202	724 aa		4.63	□□□□□ -1.67
RPL17A	YKL180W	GAL10	P04397	699 aa		4.62	□□□□□ -1.67
RPL17A	YKL180W	PPH3	P32345	308 aa		4.62	□□□□□ -1.67
RPL17A	YKL180W	AAR2	P32357	355 aa	Predicted RBP	4.62	□□□□□ -1.67
RPL17A	YKL180W	LAM1	P38851	1228 aa		4.62	□□□□□ -1.67
RPL17A	YKL180W	MTC3	P53077	123 aa		4.62	□□□□□ -1.67
RPL17A	YKL180W	NAN1	Q02931	896 aa	Known RBP	4.62	□□□□□ -1.67
RPL17A	YKL180W	SPO75	Q07798	868 aa		4.62	□□□□□ -1.67
RPL17A	YKL180W	MDM38	Q08179	573 aa		4.62	□□□□□ -1.67
RPL17A	YKL180W	HSL1	P34244	1518 aa		4.62	□□□□□ -1.67
RPL17A	YKL180W	ADE8	P04161	214 aa		4.61	□□□□□ -1.67
RPL17A	YKL180W	RPS13	P05756	151 aa	Known RBP	4.61	□□□□□ -1.67
RPL17A	YKL180W	RAD4	P14736	754 aa		4.61	□□□□□ -1.67
RPL17A	YKL180W	MEF2	P39677	819 aa		4.61	□□□□□ -1.67
RPL17A	YKL180W	UBP5	P39944	805 aa		4.61	□□□□□ -1.67
RPL17A	YKL180W	TPO2	P53283	614 aa		4.61	□□□□□ -1.67
RPL17A	YKL180W	YLL058W	Q12198	575 aa		4.61	□□□□□ -1.67
RPL17A	YKL180W	RIB2	Q12362	591 aa	Known RBP	4.61	□□□□□ -1.67
RPL17A	YKL180W	SPT6	P23615	1451 aa	Known RBP	4.61	□□□□□ -1.67
RPL17A	YKL180W	THO2	P53552	1597 aa	Known RBP	4.61	□□□□□ -1.67
RPL17A	YKL180W	ENA1	P13587	1091 aa		4.6	□□□□□ -1.67
RPL17A	YKL180W	SRM1	P21827	482 aa		4.6	□□□□□ -1.67
RPL17A	YKL180W	NNF1	P47149	201 aa		4.6	□□□□□ -1.67
RPL17A	YKL180W	ENA2	Q01896	1091 aa		4.6	□□□□□ -1.67
RPL17A	YKL180W	MSC2	Q03455	724 aa		4.6	□□□□□ -1.67
RPL17A	YKL180W	PLB2	Q03674	706 aa		4.6	□□□□□ -1.67
RPL17A	YKL180W	SIZ1	Q04195	904 aa		4.6	□□□□□ -1.67
RPL17A	YKL180W	EAF1	Q06337	982 aa		4.6	□□□□□ -1.67
RPL17A	YKL180W	YPL277C	Q08989	487 aa		4.6	□□□□□ -1.67
RPL17A	YKL180W	OSH2	Q12451	1283 aa		4.6	□□□□□ -1.67
RPL17A	YKL180W	ENA5	Q12691	1091 aa		4.6	□□□□□ -1.67
RPL17A	YKL180W	MMS22	Q06164	1454 aa		4.6	□□□□□ -1.67
RPL17A	YKL180W	PRP6	P19735	899 aa	Predicted RBP	4.59	□□□□□ -1.67
RPL17A	YKL180W	PRP9	P19736	530 aa	Known RBP	4.59	□□□□□ -1.67
RPL17A	YKL180W	XRN1	P22147	1528 aa	Known RBP	4.59	□□□□□ -1.67
RPL17A	YKL180W	CDC12	P32468	407 aa	Known RBP	4.59	□□□□□ -1.67
RPL17A	YKL180W	ALR2	P43553	858 aa		4.59	□□□□□ -1.67
RPL17A	YKL180W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
RPL17A	YKL180W	TIM54	P47045	478 aa		4.59	□□□□□ -1.67
RPL17A	YKL180W	SPT20	P50875	604 aa		4.59	□□□□□ -1.67
RPL17A	YKL180W	RIM8	P53179	542 aa		4.59	□□□□□ -1.67
RPL17A	YKL180W	GTF1	P53260	183 aa	Predicted RBP	4.59	□□□□□ -1.67
RPL17A	YKL180W	PBP1	P53297	722 aa	Known RBP	4.59	□□□□□ -1.67
RPL17A	YKL180W	SRT1	Q03175	343 aa		4.59	□□□□□ -1.67
RPL17A	YKL180W	XYL2	Q07993	356 aa		4.59	□□□□□ -1.67
RPL17A	YKL180W	FMP25	Q08023	583 aa		4.59	□□□□□ -1.67
RPL17A	YKL180W	SOD2	P00447	233 aa		4.58	□□□□□ -1.68
RPL17A	YKL180W	ARE1	P25628	610 aa		4.58	□□□□□ -1.68
RPL17A	YKL180W	RPL8B	P29453	256 aa	Known RBP	4.58	□□□□□ -1.68
RPL17A	YKL180W	CDC11	P32458	415 aa		4.58	□□□□□ -1.68
RPL17A	YKL180W	TOD6	P34219	525 aa		4.58	□□□□□ -1.68
RPL17A	YKL180W	YRO2	P38079	344 aa		4.58	□□□□□ -1.68
RPL17A	YKL180W	GIC1	P38785	314 aa		4.58	□□□□□ -1.68
RPL17A	YKL180W	YAP1801	P38856	637 aa		4.58	□□□□□ -1.68
RPL17A	YKL180W	TAT2	P38967	592 aa		4.58	□□□□□ -1.68
RPL17A	YKL180W	ZRG8	P40021	1076 aa		4.58	□□□□□ -1.68
RPL17A	YKL180W	PFD1	P46988	109 aa		4.58	□□□□□ -1.68
RPL17A	YKL180W	YJL049W	P47048	450 aa		4.58	□□□□□ -1.68
RPL17A	YKL180W	ERP6	P53198	216 aa		4.58	□□□□□ -1.68
RPL17A	YKL180W	GCN5	Q03330	439 aa		4.58	□□□□□ -1.68
RPL17A	YKL180W	YPR196W	Q06595	470 aa		4.58	□□□□□ -1.68
RPL17A	YKL180W	SIN3	P22579	1536 aa		4.57	□□□□□ -1.68
RPL17A	YKL180W	FUN30	P31380	1131 aa		4.57	□□□□□ -1.68
RPL17A	YKL180W	ECM21	P38167	1117 aa	Known RBP	4.57	□□□□□ -1.68
RPL17A	YKL180W	YGR125W	P53273	1036 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms