RNA–Protein interactions for RNA: YKL078W

DHR2, Transcript of Predominantly nucleolar DEAH-box ATP-dependent RNA helicase, yeast

Gene DHR2, Length 2,208 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DHR2	YKL078W	TOP3	P13099	656 aa		4.88	□□□□□ -1.63
DHR2	YKL078W	PDC5	P16467	563 aa	Known RBP	4.88	□□□□□ -1.63
DHR2	YKL078W	NFS1	P25374	497 aa		4.88	□□□□□ -1.63
DHR2	YKL078W	YEL1	P34225	687 aa		4.88	□□□□□ -1.63
DHR2	YKL078W	MAE1	P36013	669 aa	Known RBP	4.88	□□□□□ -1.63
DHR2	YKL078W	DSS1	P39112	969 aa		4.88	□□□□□ -1.63
DHR2	YKL078W	LCD1	Q04377	747 aa		4.88	□□□□□ -1.63
DHR2	YKL078W	DUS3	Q06053	668 aa	Known RBP	4.88	□□□□□ -1.63
DHR2	YKL078W	CDC25	P04821	1589 aa		4.88	□□□□□ -1.63
DHR2	YKL078W	NUP145	P49687	1317 aa		4.87	□□□□□ -1.63
DHR2	YKL078W	RPN3	P40016	523 aa	Known RBP	4.87	□□□□□ -1.63
DHR2	YKL078W	ALG2	P43636	503 aa		4.87	□□□□□ -1.63
DHR2	YKL078W	YGR045C	P53229	120 aa		4.87	□□□□□ -1.63
DHR2	YKL078W	MTC5	Q03897	1148 aa		4.87	□□□□□ -1.63
DHR2	YKL078W	RSA3	Q05942	220 aa	Known RBP	4.87	□□□□□ -1.63
DHR2	YKL078W	MET5	P47169	1442 aa		4.87	□□□□□ -1.63
DHR2	YKL078W	MSD1	P15179	658 aa	Known RBP	4.87	□□□□□ -1.63
DHR2	YKL078W	RAD53	P22216	821 aa		4.87	□□□□□ -1.63
DHR2	YKL078W	NAR1	P23503	491 aa	Known RBP	4.87	□□□□□ -1.63
DHR2	YKL078W	NNK1	P36003	928 aa		4.87	□□□□□ -1.63
DHR2	YKL078W	YBR284W	P38150	797 aa		4.87	□□□□□ -1.63
DHR2	YKL078W	DSE4	P53753	1117 aa		4.87	□□□□□ -1.63
DHR2	YKL078W	FOL1	P53848	824 aa		4.87	□□□□□ -1.63
DHR2	YKL078W	UME1	Q03010	460 aa		4.87	□□□□□ -1.63
DHR2	YKL078W	THI73	Q07904	523 aa		4.87	□□□□□ -1.63
DHR2	YKL078W	YOR223W	Q12015	292 aa		4.87	□□□□□ -1.63
DHR2	YKL078W	SPO21	Q12411	609 aa		4.87	□□□□□ -1.63
DHR2	YKL078W	RPL11A	P0C0W9	174 aa	Known RBP	4.86	□□□□□ -1.63
DHR2	YKL078W	YER152C	P10356	443 aa		4.86	□□□□□ -1.63
DHR2	YKL078W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
DHR2	YKL078W	TED1	P40533	473 aa		4.86	□□□□□ -1.63
DHR2	YKL078W	SDA1	P53313	767 aa	Known RBP	4.86	□□□□□ -1.63
DHR2	YKL078W	HRK1	Q08732	759 aa	Known RBP	4.86	□□□□□ -1.63
DHR2	YKL078W	RPL11B	Q3E757	174 aa	Predicted RBP	4.86	□□□□□ -1.63
DHR2	YKL078W	PAN1	P32521	1480 aa		4.85	□□□□□ -1.63
DHR2	YKL078W	TY4B-P	A0A0B7P3V8	1104 aa		4.85	□□□□□ -1.63
DHR2	YKL078W	THS1	P04801	734 aa	Known RBP	4.85	□□□□□ -1.63
DHR2	YKL078W	MEF1	P25039	761 aa		4.85	□□□□□ -1.63
DHR2	YKL078W	YDR444W	Q04093	687 aa		4.85	□□□□□ -1.63
DHR2	YKL078W	YLR001C	Q07895	862 aa		4.85	□□□□□ -1.63
DHR2	YKL078W	ALG6	Q12001	544 aa	Known RBP	4.85	□□□□□ -1.63
DHR2	YKL078W	YPR071W	Q12346	211 aa		4.85	□□□□□ -1.63
DHR2	YKL078W	TY4A-H	Q6Q5P6	413 aa		4.85	□□□□□ -1.63
DHR2	YKL078W	TY2B-LR1	P0C2J3	1770 aa		4.85	□□□□□ -1.63
DHR2	YKL078W	TY2B-F	P0CX63	1770 aa		4.85	□□□□□ -1.63
DHR2	YKL078W	TY2B-GR2	P0CX64	1770 aa		4.85	□□□□□ -1.63
DHR2	YKL078W	TY2B-C	P25384	1770 aa		4.85	□□□□□ -1.63
DHR2	YKL078W	TY2B-DR2	Q03494	1770 aa		4.85	□□□□□ -1.63
DHR2	YKL078W	TY1B-DR1	Q03855	1755 aa		4.85	□□□□□ -1.63
DHR2	YKL078W	TY2B-DR3	Q07791	1770 aa	Known RBP	4.85	□□□□□ -1.63
DHR2	YKL078W	TY2B-OR1	Q12113	1770 aa		4.85	□□□□□ -1.63
DHR2	YKL078W	TY2B-DR1	Q12472	1770 aa		4.85	□□□□□ -1.63
DHR2	YKL078W	TY2B-OR2	Q12501	1770 aa		4.85	□□□□□ -1.63
DHR2	YKL078W	GPM1	P00950	247 aa	Known RBP	4.85	□□□□□ -1.63
DHR2	YKL078W	RET1	P22276	1149 aa	Known RBP	4.85	□□□□□ -1.63
DHR2	YKL078W	VBA3	P25594	458 aa		4.85	□□□□□ -1.63
DHR2	YKL078W	KIP1	P28742	1111 aa		4.85	□□□□□ -1.63
DHR2	YKL078W	ACO2	P39533	789 aa		4.85	□□□□□ -1.63
DHR2	YKL078W	COG8	Q04632	607 aa		4.85	□□□□□ -1.63
DHR2	YKL078W	ACM1	Q08981	209 aa		4.85	□□□□□ -1.63
DHR2	YKL078W	POL1	P13382	1468 aa		4.84	□□□□□ -1.63
DHR2	YKL078W	CDC12	P32468	407 aa	Known RBP	4.84	□□□□□ -1.63
DHR2	YKL078W	ALG14	P38242	237 aa		4.84	□□□□□ -1.63
DHR2	YKL078W	CCM1	P48237	864 aa	Predicted RBP	4.84	□□□□□ -1.63
DHR2	YKL078W	ELA1	P53861	379 aa	Predicted RBP	4.84	□□□□□ -1.63
DHR2	YKL078W	TMA17	Q12513	150 aa		4.84	□□□□□ -1.63
DHR2	YKL078W	DNF1	P32660	1571 aa		4.84	□□□□□ -1.63
DHR2	YKL078W	ERS1	P17261	260 aa		4.84	□□□□□ -1.64
DHR2	YKL078W	PGM2	P37012	569 aa	Known RBP	4.84	□□□□□ -1.64
DHR2	YKL078W	YRO2	P38079	344 aa		4.84	□□□□□ -1.64
DHR2	YKL078W	MGS1	P40151	587 aa		4.84	□□□□□ -1.64
DHR2	YKL078W	BUL2	Q03758	920 aa	Known RBP	4.84	□□□□□ -1.64
DHR2	YKL078W	HFD1	Q04458	532 aa		4.84	□□□□□ -1.64
DHR2	YKL078W	FAP7	Q12055	197 aa	Predicted RBP	4.84	□□□□□ -1.64
DHR2	YKL078W	YLL058W	Q12198	575 aa		4.84	□□□□□ -1.64
DHR2	YKL078W	NHA1	Q99271	985 aa		4.84	□□□□□ -1.64
DHR2	YKL078W	TY1B-BR	Q12193	1756 aa		4.83	□□□□□ -1.64
DHR2	YKL078W	TY1B-GR3	Q12316	1755 aa		4.83	□□□□□ -1.64
DHR2	YKL078W	TY1B-OR	Q92393	1755 aa		4.83	□□□□□ -1.64
DHR2	YKL078W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
DHR2	YKL078W	SMY2	P32909	740 aa	Known RBP	4.83	□□□□□ -1.64
DHR2	YKL078W	REC104	P33323	182 aa		4.83	□□□□□ -1.64
DHR2	YKL078W	SPC29	P33419	253 aa		4.83	□□□□□ -1.64
DHR2	YKL078W	PEX8	P53248	589 aa		4.83	□□□□□ -1.64
DHR2	YKL078W	ALO1	P54783	526 aa	Known RBP	4.83	□□□□□ -1.64
DHR2	YKL078W	DOT1	Q04089	582 aa	Known RBP	4.83	□□□□□ -1.64
DHR2	YKL078W	YLR257W	Q06146	321 aa	Known RBP	4.83	□□□□□ -1.64
DHR2	YKL078W	TMA7	Q3E764	64 aa	Known RBP	4.83	□□□□□ -1.64
DHR2	YKL078W	MET22	P32179	357 aa		4.82	□□□□□ -1.64
DHR2	YKL078W	SAH1	P39954	449 aa	Known RBP	4.82	□□□□□ -1.64
DHR2	YKL078W	YIR007W	P40566	764 aa		4.82	□□□□□ -1.64
DHR2	YKL078W	SEC26	P41810	973 aa	Known RBP	4.82	□□□□□ -1.64
DHR2	YKL078W	DAM1	P53267	343 aa		4.82	□□□□□ -1.64
DHR2	YKL078W	RKR1	Q04781	1562 aa		4.82	□□□□□ -1.64
DHR2	YKL078W	MMS22	Q06164	1454 aa		4.82	□□□□□ -1.64
DHR2	YKL078W	SRD1	P09007	221 aa		4.82	□□□□□ -1.64
DHR2	YKL078W	DBP2	P24783	546 aa	Known RBP	4.82	□□□□□ -1.64
DHR2	YKL078W	SEC6	P32844	805 aa		4.82	□□□□□ -1.64
DHR2	YKL078W	YKR078W	P36158	585 aa	Known RBP	4.82	□□□□□ -1.64
DHR2	YKL078W	VPS72	Q03388	795 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms