RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C SIS2P36024 562 aa2.41□□□□□ -2.02
UFD4YKL010C ERG7P38604 731 aa2.41□□□□□ -2.02
UFD4YKL010C RCK2P38623 610 aa2.41□□□□□ -2.02
UFD4YKL010C MIP6P38760 659 aaKnown RBP2.41□□□□□ -2.02
UFD4YKL010C STT3P39007 718 aaKnown RBP2.41□□□□□ -2.02
UFD4YKL010C CSM2P40465 213 aa2.41□□□□□ -2.02
UFD4YKL010C VID28P40547 921 aa2.41□□□□□ -2.02
UFD4YKL010C MDM1Q01846 1127 aa2.41□□□□□ -2.02
UFD4YKL010C APL4Q12028 832 aa2.41□□□□□ -2.02
UFD4YKL010C UBR2Q07963 1872 aa2.41□□□□□ -2.02
UFD4YKL010C ARG82P07250 355 aa2.4□□□□□ -2.02
UFD4YKL010C PRP40P33203 583 aaKnown RBP2.4□□□□□ -2.02
UFD4YKL010C IXR1P33417 597 aa2.4□□□□□ -2.02
UFD4YKL010C JSN1P47135 1091 aaKnown RBP RIP-Chip data2.4□□□□□ -2.02 RIP-Chip
UFD4YKL010C RTC4P53850 401 aa2.4□□□□□ -2.02
UFD4YKL010C NSG2P53898 299 aa2.4□□□□□ -2.02
UFD4YKL010C SEC5P89102 971 aa2.4□□□□□ -2.02
UFD4YKL010C PCL8Q08966 492 aa2.4□□□□□ -2.02
UFD4YKL010C TUP1P16649 713 aa2.4□□□□□ -2.02
UFD4YKL010C SEC20P28791 383 aa2.4□□□□□ -2.02
UFD4YKL010C NIP1P32497 812 aaKnown RBP2.4□□□□□ -2.02
UFD4YKL010C YBL086CP38177 466 aa2.4□□□□□ -2.02
UFD4YKL010C YMR147WP40218 223 aaKnown RBP2.4□□□□□ -2.02
UFD4YKL010C CTK3P46963 296 aaPredicted RBP2.4□□□□□ -2.02
UFD4YKL010C YGR237CP50089 785 aa2.4□□□□□ -2.02
UFD4YKL010C CAF130P53280 1122 aaPredicted RBP2.4□□□□□ -2.02
UFD4YKL010C ATF2P53296 535 aa2.4□□□□□ -2.02
UFD4YKL010C HDA1P53973 706 aa2.4□□□□□ -2.02
UFD4YKL010C VPS60Q03390 229 aa2.4□□□□□ -2.02
UFD4YKL010C ERV41Q04651 352 aa2.4□□□□□ -2.02
UFD4YKL010C ESC2Q06340 456 aa2.4□□□□□ -2.02
UFD4YKL010C GUD1Q07729 489 aa2.4□□□□□ -2.02
UFD4YKL010C RPO26P20435 155 aa2.4□□□□□ -2.03
UFD4YKL010C UGA4P32837 571 aa2.4□□□□□ -2.03
UFD4YKL010C CTM1P38818 585 aa2.4□□□□□ -2.03
UFD4YKL010C TIF4631P39935 952 aaKnown RBP2.4□□□□□ -2.03
UFD4YKL010C LSC1P53598 329 aaKnown RBP2.4□□□□□ -2.03
UFD4YKL010C UFD2P54860 961 aa2.4□□□□□ -2.03
UFD4YKL010C OPT2Q06593 877 aa2.4□□□□□ -2.03
UFD4YKL010C NUC1P08466 329 aa2.4□□□□□ -2.03
UFD4YKL010C PRP22P24384 1145 aaKnown RBP2.4□□□□□ -2.03
UFD4YKL010C PRO3P32263 286 aaKnown RBP2.4□□□□□ -2.03
UFD4YKL010C SLA1P32790 1244 aa2.4□□□□□ -2.03
UFD4YKL010C ENP2P48234 707 aaKnown RBP2.4□□□□□ -2.03
UFD4YKL010C SLT2Q00772 484 aa2.4□□□□□ -2.03
UFD4YKL010C GFD1Q04839 188 aaKnown RBP2.4□□□□□ -2.03
UFD4YKL010C INM2Q05533 292 aa2.4□□□□□ -2.03
UFD4YKL010C SGD1Q06132 899 aa2.4□□□□□ -2.03
UFD4YKL010C BDF2Q07442 638 aa2.4□□□□□ -2.03
UFD4YKL010C SIL1Q08199 421 aa2.4□□□□□ -2.03
UFD4YKL010C PLP2Q12017 286 aa2.4□□□□□ -2.03
UFD4YKL010C KIN1P13185 1064 aa2.39□□□□□ -2.03
UFD4YKL010C RAD57P25301 460 aa2.39□□□□□ -2.03
UFD4YKL010C CNS1P33313 385 aa2.39□□□□□ -2.03
UFD4YKL010C EMW1P42842 904 aaKnown RBP2.39□□□□□ -2.03
UFD4YKL010C ESBP6P53918 673 aa2.39□□□□□ -2.03
UFD4YKL010C HXK1P04806 485 aaKnown RBP2.39□□□□□ -2.03
UFD4YKL010C PPR1P07272 904 aaPredicted RBP2.39□□□□□ -2.03
UFD4YKL010C YEL076C-AP0CX16 216 aa2.39□□□□□ -2.03
UFD4YKL010C YLR464WP0CX17 216 aa2.39□□□□□ -2.03
UFD4YKL010C PYC1P11154 1178 aaKnown RBP2.39□□□□□ -2.03
UFD4YKL010C NFU1P32860 256 aa2.39□□□□□ -2.03
UFD4YKL010C UGA2P38067 497 aa2.39□□□□□ -2.03
UFD4YKL010C YEL076CP39971 216 aa2.39□□□□□ -2.03
UFD4YKL010C EPL1P43572 832 aa2.39□□□□□ -2.03
UFD4YKL010C APL6P46682 809 aa2.39□□□□□ -2.03
UFD4YKL010C YJR039WP47107 1121 aa2.39□□□□□ -2.03
UFD4YKL010C YGR130CP53278 816 aa2.39□□□□□ -2.03
UFD4YKL010C YLR346CQ06139 101 aa2.39□□□□□ -2.03
UFD4YKL010C RIO1Q12196 484 aaKnown RBP2.39□□□□□ -2.03
UFD4YKL010C PEP5P12868 1029 aa2.39□□□□□ -2.03
UFD4YKL010C ESS1P22696 170 aa2.39□□□□□ -2.03
UFD4YKL010C KIP2P28743 706 aa2.39□□□□□ -2.03
UFD4YKL010C GLC3P32775 704 aa2.39□□□□□ -2.03
UFD4YKL010C PMC1P38929 1173 aaPredicted RBP2.39□□□□□ -2.03
UFD4YKL010C SHQ1P40486 507 aaPredicted RBP2.39□□□□□ -2.03
UFD4YKL010C EBS1Q03466 884 aaKnown RBP2.39□□□□□ -2.03
UFD4YKL010C VAC14Q06708 880 aa2.39□□□□□ -2.03
UFD4YKL010C GRX6Q12438 231 aa2.39□□□□□ -2.03
UFD4YKL010C YOR111WQ99210 232 aa2.39□□□□□ -2.03
UFD4YKL010C YJU3P28321 313 aa2.38□□□□□ -2.03
UFD4YKL010C XRS2P33301 854 aa2.38□□□□□ -2.03
UFD4YKL010C PAN5P38787 379 aa2.38□□□□□ -2.03
UFD4YKL010C CCT4P39078 528 aaKnown RBP2.38□□□□□ -2.03
UFD4YKL010C SMC3P47037 1230 aa2.38□□□□□ -2.03
UFD4YKL010C RPT6Q01939 405 aaKnown RBP2.38□□□□□ -2.03
UFD4YKL010C RMD1Q03441 430 aa2.38□□□□□ -2.03
UFD4YKL010C ACK1Q07622 623 aaPredicted RBP2.38□□□□□ -2.03
UFD4YKL010C WHI4Q07655 649 aaKnown RBP2.38□□□□□ -2.03
UFD4YKL010C CDC53Q12018 815 aaKnown RBP2.38□□□□□ -2.03
UFD4YKL010C SRM1P21827 482 aa2.38□□□□□ -2.03
UFD4YKL010C EUG1P32474 517 aa2.38□□□□□ -2.03
UFD4YKL010C NGR1P32831 672 aaKnown RBP2.38□□□□□ -2.03
UFD4YKL010C YET1P35723 206 aa2.38□□□□□ -2.03
UFD4YKL010C PTK1P36002 662 aaPredicted RBP2.38□□□□□ -2.03
UFD4YKL010C RPN11P43588 306 aaKnown RBP2.38□□□□□ -2.03
UFD4YKL010C EEB1Q02891 456 aa2.38□□□□□ -2.03
UFD4YKL010C TY1A-BLQ12266 440 aa2.38□□□□□ -2.03
UFD4YKL010C HIS4P00815 799 aaKnown RBP2.38□□□□□ -2.03
UFD4YKL010C CDC10P25342 322 aaKnown RBP2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 118.2 ms