RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W RAD24P32641 659 aa6.43□□□□□ -1.38
CBF1YJR060W NEO1P40527 1151 aa6.43□□□□□ -1.38
CBF1YJR060W LEM3P42838 414 aa6.43□□□□□ -1.38
CBF1YJR060W VPS16Q03308 798 aa6.43□□□□□ -1.38
CBF1YJR060W UBX2Q04228 584 aa6.43□□□□□ -1.38
CBF1YJR060W ESF1Q06344 628 aaKnown RBP6.43□□□□□ -1.38
CBF1YJR060W PIN2Q12057 282 aa6.43□□□□□ -1.38
CBF1YJR060W TY4B-PA0A0B7P3V8 1104 aa6.42□□□□□ -1.38
CBF1YJR060W DUR3P33413 735 aa6.42□□□□□ -1.38
CBF1YJR060W SPC42P36094 363 aa6.42□□□□□ -1.38
CBF1YJR060W RRM3P38766 723 aa6.42□□□□□ -1.38
CBF1YJR060W NMD2P38798 1089 aaKnown RBP6.42□□□□□ -1.38
CBF1YJR060W LSB6P42951 607 aa6.42□□□□□ -1.38
CBF1YJR060W YNR065CP53751 1116 aa6.42□□□□□ -1.38
CBF1YJR060W DOS2P54858 310 aa6.42□□□□□ -1.38
CBF1YJR060W CSI1Q04368 295 aa6.42□□□□□ -1.38
CBF1YJR060W YPR053CQ6Q5F3 151 aa6.42□□□□□ -1.38
CBF1YJR060W TY4A-HQ6Q5P6 413 aa6.42□□□□□ -1.38
CBF1YJR060W DAL5P15365 543 aa6.41□□□□□ -1.38
CBF1YJR060W SRP40P32583 406 aaPredicted RBP6.41□□□□□ -1.38
CBF1YJR060W AMN1P38285 549 aaPredicted RBP6.41□□□□□ -1.38
CBF1YJR060W FET4P40988 552 aa6.41□□□□□ -1.38
CBF1YJR060W NUT1P53114 1132 aa6.41□□□□□ -1.38
CBF1YJR060W YGR122WP53272 402 aa6.41□□□□□ -1.38
CBF1YJR060W YAF9P53930 226 aa6.41□□□□□ -1.38
CBF1YJR060W FCP1Q03254 732 aa6.41□□□□□ -1.38
CBF1YJR060W MSH6Q03834 1242 aa6.41□□□□□ -1.38
CBF1YJR060W WRS1Q12109 432 aaKnown RBP6.41□□□□□ -1.38
CBF1YJR060W NPR1P22211 790 aa6.4□□□□□ -1.38
CBF1YJR060W FRD1P32614 470 aaKnown RBP6.4□□□□□ -1.38
CBF1YJR060W PET112P33893 541 aa6.4□□□□□ -1.38
CBF1YJR060W RIM11P38615 370 aa6.4□□□□□ -1.38
CBF1YJR060W PAN5P38787 379 aa6.4□□□□□ -1.38
CBF1YJR060W UBP12P39538 1254 aa6.4□□□□□ -1.38
CBF1YJR060W MON1P53129 644 aa6.4□□□□□ -1.38
CBF1YJR060W YCS4Q06156 1176 aa6.4□□□□□ -1.38
CBF1YJR060W HVG1P0CE11 249 aa6.39□□□□□ -1.39
CBF1YJR060W CYC8P14922 966 aa6.39□□□□□ -1.39
CBF1YJR060W SAC7P17121 654 aa6.39□□□□□ -1.39
CBF1YJR060W SWC3P31376 625 aa6.39□□□□□ -1.39
CBF1YJR060W SHC1P39000 512 aa6.39□□□□□ -1.39
CBF1YJR060W CWC24P53769 259 aa6.39□□□□□ -1.39
CBF1YJR060W SQS1P53866 767 aaKnown RBP6.39□□□□□ -1.39
CBF1YJR060W HAS1Q03532 505 aaKnown RBP6.39□□□□□ -1.39
CBF1YJR060W SPO71Q03868 1245 aa6.39□□□□□ -1.39
CBF1YJR060W PMT7Q06644 662 aa6.39□□□□□ -1.39
CBF1YJR060W CMR1Q12510 522 aaKnown RBP6.39□□□□□ -1.39
CBF1YJR060W YKU70P32807 602 aa6.38□□□□□ -1.39
CBF1YJR060W MNR2P35724 969 aa6.38□□□□□ -1.39
CBF1YJR060W YNG2P38806 282 aaKnown RBP6.38□□□□□ -1.39
CBF1YJR060W RVS167P39743 482 aaKnown RBP6.38□□□□□ -1.39
CBF1YJR060W PRY1P47032 299 aa6.38□□□□□ -1.39
CBF1YJR060W BUD9P53226 547 aa6.38□□□□□ -1.39
CBF1YJR060W RNH70P53331 553 aa6.38□□□□□ -1.39
CBF1YJR060W SPO1P53541 631 aa6.38□□□□□ -1.39
CBF1YJR060W DSE4P53753 1117 aa6.38□□□□□ -1.39
CBF1YJR060W YDR215CQ12240 137 aa6.38□□□□□ -1.39
CBF1YJR060W POM152P39685 1337 aa6.37□□□□□ -1.39
CBF1YJR060W TOP1P04786 769 aa6.37□□□□□ -1.39
CBF1YJR060W YCK2P23292 546 aaKnown RBP6.37□□□□□ -1.39
CBF1YJR060W ICL1P28240 557 aaPredicted RBP6.37□□□□□ -1.39
CBF1YJR060W MCM5P29496 775 aaKnown RBP6.37□□□□□ -1.39
CBF1YJR060W GCD7P32502 381 aaPredicted RBP6.37□□□□□ -1.39
CBF1YJR060W PPG1P32838 368 aa6.37□□□□□ -1.39
CBF1YJR060W YKL091CP33324 310 aaKnown RBP6.37□□□□□ -1.39
CBF1YJR060W SLN1P39928 1220 aaPredicted RBP6.37□□□□□ -1.39
CBF1YJR060W YJL049WP47048 450 aa6.37□□□□□ -1.39
CBF1YJR060W DAL4Q04895 635 aa6.37□□□□□ -1.39
CBF1YJR060W GAS5Q08193 484 aa6.37□□□□□ -1.39
CBF1YJR060W SNU66Q12420 587 aaPredicted RBP6.37□□□□□ -1.39
CBF1YJR060W ADR1P07248 1323 aa6.36□□□□□ -1.39
CBF1YJR060W CAF20P12962 161 aaKnown RBP6.36□□□□□ -1.39
CBF1YJR060W TAT1P38085 619 aa6.36□□□□□ -1.39
CBF1YJR060W SKN7P38889 622 aa6.36□□□□□ -1.39
CBF1YJR060W OSW7P43611 510 aa6.36□□□□□ -1.39
CBF1YJR060W THI3Q07471 609 aa6.36□□□□□ -1.39
CBF1YJR060W PSF3Q12146 194 aa6.36□□□□□ -1.39
CBF1YJR060W SSF2Q12153 453 aaPredicted RBP6.36□□□□□ -1.39
CBF1YJR060W HXK1P04806 485 aaKnown RBP6.35□□□□□ -1.39
CBF1YJR060W KRE2P27809 442 aa6.35□□□□□ -1.39
CBF1YJR060W MAE1P36013 669 aaKnown RBP6.35□□□□□ -1.39
CBF1YJR060W FAA3P39002 694 aa6.35□□□□□ -1.39
CBF1YJR060W NUG1P40010 520 aaKnown RBP6.35□□□□□ -1.39
CBF1YJR060W TOS4Q06266 489 aa6.35□□□□□ -1.39
CBF1YJR060W NCB2Q92317 146 aa6.35□□□□□ -1.39
CBF1YJR060W GSC2P40989 1895 aa6.34□□□□□ -1.39
CBF1YJR060W MGM1P32266 881 aa6.34□□□□□ -1.39
CBF1YJR060W MRPS18P42847 217 aa6.34□□□□□ -1.39
CBF1YJR060W IOC3P43596 787 aa6.34□□□□□ -1.39
CBF1YJR060W RPT4P53549 437 aaKnown RBP6.34□□□□□ -1.39
CBF1YJR060W ELG1Q12050 791 aa6.34□□□□□ -1.39
CBF1YJR060W AI3P03877 415 aa6.33□□□□□ -1.4
CBF1YJR060W HTS1P07263 546 aaKnown RBP6.33□□□□□ -1.4
CBF1YJR060W PIF1P07271 859 aa6.33□□□□□ -1.4
CBF1YJR060W RET1P22276 1149 aaKnown RBP6.33□□□□□ -1.4
CBF1YJR060W MSM1P22438 575 aa6.33□□□□□ -1.4
CBF1YJR060W SFA1P32771 386 aa6.33□□□□□ -1.4
CBF1YJR060W FPR3P38911 411 aaKnown RBP6.33□□□□□ -1.4
CBF1YJR060W TIM50Q02776 476 aa6.33□□□□□ -1.4
CBF1YJR060W YLR278CQ05854 1341 aa6.32□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 41.1 ms