RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C RIB2Q12362 591 aaKnown RBP4.87□□□□□ -1.63
ATG27YJL178C SRM1P21827 482 aa4.86□□□□□ -1.63
ATG27YJL178C GRX1P25373 110 aaKnown RBP4.86□□□□□ -1.63
ATG27YJL178C SBA1P28707 216 aaKnown RBP4.86□□□□□ -1.63
ATG27YJL178C VBA5P36172 582 aa4.86□□□□□ -1.63
ATG27YJL178C MBP1P39678 833 aa4.86□□□□□ -1.63
ATG27YJL178C SPF1P39986 1215 aaKnown RBP4.86□□□□□ -1.63
ATG27YJL178C SIP5P40210 489 aaKnown RBP4.86□□□□□ -1.63
ATG27YJL178C TDA5Q06417 326 aaKnown RBP4.86□□□□□ -1.63
ATG27YJL178C YPL277CQ08989 487 aa4.86□□□□□ -1.63
ATG27YJL178C CYC1P00044 109 aaPredicted RBP4.85□□□□□ -1.63
ATG27YJL178C SLA2P33338 968 aa4.85□□□□□ -1.63
ATG27YJL178C UGA2P38067 497 aa4.85□□□□□ -1.63
ATG27YJL178C RFC5P38251 354 aa4.85□□□□□ -1.63
ATG27YJL178C RRT14P40470 206 aa4.85□□□□□ -1.63
ATG27YJL178C RIM8P53179 542 aa4.85□□□□□ -1.63
ATG27YJL178C MAP1Q01662 387 aaKnown RBP RIP-Chip data4.85□□□□□ -1.63not detected
ATG27YJL178C SOD2P00447 233 aa4.84□□□□□ -1.63
ATG27YJL178C PLB2Q03674 706 aa4.84□□□□□ -1.63
ATG27YJL178C YDR132CQ03900 495 aa4.84□□□□□ -1.63
ATG27YJL178C RSM24Q03976 319 aa4.84□□□□□ -1.63
ATG27YJL178C SHE9Q04172 456 aa4.84□□□□□ -1.63
ATG27YJL178C SVS1Q12254 260 aa4.84□□□□□ -1.63
ATG27YJL178C HSL1P34244 1518 aa4.83□□□□□ -1.64
ATG27YJL178C BI4P03879 638 aa4.83□□□□□ -1.64
ATG27YJL178C RPS13P05756 151 aaKnown RBP4.83□□□□□ -1.64
ATG27YJL178C STE5P32917 917 aa4.83□□□□□ -1.64
ATG27YJL178C LAM1P38851 1228 aa4.83□□□□□ -1.64
ATG27YJL178C TAT2P38967 592 aa4.83□□□□□ -1.64
ATG27YJL178C MEF2P39677 819 aa4.83□□□□□ -1.64
ATG27YJL178C TAF1P46677 1066 aa4.83□□□□□ -1.64
ATG27YJL178C SGD1Q06132 899 aa4.83□□□□□ -1.64
ATG27YJL178C GAL10P04397 699 aa4.82□□□□□ -1.64
ATG27YJL178C KIN2P13186 1147 aaKnown RBP4.82□□□□□ -1.64
ATG27YJL178C ACE2P21192 770 aa4.82□□□□□ -1.64
ATG27YJL178C YKL151CP36059 337 aa4.82□□□□□ -1.64
ATG27YJL178C FLR1P38124 548 aa4.82□□□□□ -1.64
ATG27YJL178C YBR184WP38299 523 aa4.82□□□□□ -1.64
ATG27YJL178C MTC3P53077 123 aa4.82□□□□□ -1.64
ATG27YJL178C ROT1Q03691 256 aa4.82□□□□□ -1.64
ATG27YJL178C ESC8Q08119 714 aa4.82□□□□□ -1.64
ATG27YJL178C YOR352WQ08816 343 aa4.82□□□□□ -1.64
ATG27YJL178C YLL058WQ12198 575 aa4.82□□□□□ -1.64
ATG27YJL178C CMP2P14747 604 aa4.81□□□□□ -1.64
ATG27YJL178C TOD6P34219 525 aa4.81□□□□□ -1.64
ATG27YJL178C NNF1P47149 201 aa4.81□□□□□ -1.64
ATG27YJL178C SIZ1Q04195 904 aa4.81□□□□□ -1.64
ATG27YJL178C DUS4Q06063 367 aa4.81□□□□□ -1.64
ATG27YJL178C SWR1Q05471 1514 aa4.81□□□□□ -1.64
ATG27YJL178C RAD4P14736 754 aa4.8□□□□□ -1.64
ATG27YJL178C YCR015CP25616 317 aa4.8□□□□□ -1.64
ATG27YJL178C MRP8P35719 219 aa4.8□□□□□ -1.64
ATG27YJL178C HFM1P51979 1187 aa4.8□□□□□ -1.64
ATG27YJL178C GCN5Q03330 439 aa4.8□□□□□ -1.64
ATG27YJL178C SPT6P23615 1451 aaKnown RBP4.8□□□□□ -1.64
ATG27YJL178C CDC6P09119 513 aa4.79□□□□□ -1.64
ATG27YJL178C APL1P27351 700 aa4.79□□□□□ -1.64
ATG27YJL178C OCA5P38738 679 aa4.79□□□□□ -1.64
ATG27YJL178C NAN1Q02931 896 aaKnown RBP4.79□□□□□ -1.64
ATG27YJL178C HRQ1Q05549 1077 aa4.79□□□□□ -1.64
ATG27YJL178C XYL2Q07993 356 aa4.79□□□□□ -1.64
ATG27YJL178C PRE10P21242 288 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64not detected
ATG27YJL178C PBY1P38254 753 aa4.78□□□□□ -1.64
ATG27YJL178C IOC3P43596 787 aa4.78□□□□□ -1.64
ATG27YJL178C SRP1Q02821 542 aaKnown RBP4.78□□□□□ -1.64
ATG27YJL178C MSC2Q03455 724 aa4.78□□□□□ -1.64
ATG27YJL178C VTS1Q08831 523 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64not detected
ATG27YJL178C SCT1P32784 759 aa4.77□□□□□ -1.65
ATG27YJL178C GIP4P39732 760 aa4.77□□□□□ -1.65
ATG27YJL178C IRR1P40541 1150 aa4.77□□□□□ -1.65
ATG27YJL178C PFD1P46988 109 aa4.77□□□□□ -1.65
ATG27YJL178C TIM54P47045 478 aa4.77□□□□□ -1.65
ATG27YJL178C SPT20P50875 604 aa4.77□□□□□ -1.65
ATG27YJL178C HUL5P53119 910 aa4.77□□□□□ -1.65
ATG27YJL178C FMP25Q08023 583 aa4.77□□□□□ -1.65
ATG27YJL178C MDM38Q08179 573 aa4.77□□□□□ -1.65
ATG27YJL178C YOL098CQ12496 1037 aa4.77□□□□□ -1.65
ATG27YJL178C RPL8BP29453 256 aaKnown RBP4.76□□□□□ -1.65
ATG27YJL178C GUS1P46655 708 aaKnown RBP RIP-Chip data4.76□□□□□ -1.65not detected
ATG27YJL178C PBP1P53297 722 aaKnown RBP4.76□□□□□ -1.65
ATG27YJL178C DUS3Q06053 668 aaKnown RBP4.76□□□□□ -1.65
ATG27YJL178C YDR306CQ06640 478 aa4.76□□□□□ -1.65
ATG27YJL178C UBX5Q06682 500 aa4.76□□□□□ -1.65
ATG27YJL178C CDC20P26309 610 aa4.75□□□□□ -1.65
ATG27YJL178C FUN30P31380 1131 aa4.75□□□□□ -1.65
ATG27YJL178C CDC12P32468 407 aaKnown RBP4.75□□□□□ -1.65
ATG27YJL178C DOM34P33309 386 aa4.75□□□□□ -1.65
ATG27YJL178C SAH1P39954 449 aaKnown RBP4.75□□□□□ -1.65
ATG27YJL178C TPO2P53283 614 aa4.75□□□□□ -1.65
ATG27YJL178C CLU1Q03690 1277 aaKnown RBP4.75□□□□□ -1.65
ATG27YJL178C NSE3Q05541 303 aa4.75□□□□□ -1.65
ATG27YJL178C OSW2Q12202 724 aa4.75□□□□□ -1.65
ATG27YJL178C HIR3P47171 1648 aa4.75□□□□□ -1.65
ATG27YJL178C PRP9P19736 530 aaKnown RBP4.74□□□□□ -1.65
ATG27YJL178C YKL222CP35995 705 aa4.74□□□□□ -1.65
ATG27YJL178C YAP1801P38856 637 aa4.74□□□□□ -1.65
ATG27YJL178C NPP2P39997 493 aa4.74□□□□□ -1.65
ATG27YJL178C ALR2P43553 858 aa4.74□□□□□ -1.65
ATG27YJL178C YJL049WP47048 450 aa4.74□□□□□ -1.65
ATG27YJL178C SRT1Q03175 343 aa4.74□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 10 ms