RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C MXR1P40029 184 aa2.93□□□□□ -1.94
VPS35YJL154C YFL066CP43538 392 aa2.93□□□□□ -1.94
VPS35YJL154C PUF3Q07807 879 aaKnown RBP RIP-Chip data2.93□□□□□ -1.94not detected
VPS35YJL154C RPL11BQ3E757 174 aaPredicted RBP2.93□□□□□ -1.94
VPS35YJL154C MSB1P21339 1137 aaKnown RBP2.92□□□□□ -1.94
VPS35YJL154C PRO1P32264 428 aa2.92□□□□□ -1.94
VPS35YJL154C YBR284WP38150 797 aa2.92□□□□□ -1.94
VPS35YJL154C ICP55P40051 511 aa2.92□□□□□ -1.94
VPS35YJL154C YGR161W-CQ3E744 92 aa2.92□□□□□ -1.94
VPS35YJL154C SFP1P32432 683 aa2.92□□□□□ -1.94
VPS35YJL154C MDL2P33311 773 aa2.92□□□□□ -1.94
VPS35YJL154C YHR020WP38708 688 aaKnown RBP2.92□□□□□ -1.94
VPS35YJL154C PNT1P38969 423 aa2.92□□□□□ -1.94
VPS35YJL154C SIP5P40210 489 aaKnown RBP2.92□□□□□ -1.94
VPS35YJL154C PFD1P46988 109 aa2.92□□□□□ -1.94
VPS35YJL154C UTP14Q04500 899 aaKnown RBP2.92□□□□□ -1.94
VPS35YJL154C SRO9P25567 434 aaKnown RBP2.92□□□□□ -1.94
VPS35YJL154C AIM26P32858 118 aa2.92□□□□□ -1.94
VPS35YJL154C KAE1P36132 386 aa2.92□□□□□ -1.94
VPS35YJL154C UGA2P38067 497 aa2.92□□□□□ -1.94
VPS35YJL154C MNN1P39106 762 aa2.92□□□□□ -1.94
VPS35YJL154C BUD6P41697 788 aa2.92□□□□□ -1.94
VPS35YJL154C YPR196WQ06595 470 aa2.92□□□□□ -1.94
VPS35YJL154C SPC42P36094 363 aa2.91□□□□□ -1.94
VPS35YJL154C PIK1P39104 1066 aa2.91□□□□□ -1.94
VPS35YJL154C GUS1P46655 708 aaKnown RBP RIP-Chip data2.91□□□□□ -1.94not detected
VPS35YJL154C DOS2P54858 310 aa2.91□□□□□ -1.94
VPS35YJL154C EAR1Q03212 550 aa2.91□□□□□ -1.94
VPS35YJL154C YVC1Q12324 675 aa2.91□□□□□ -1.94
VPS35YJL154C YPR071WQ12346 211 aa2.91□□□□□ -1.94
VPS35YJL154C ERR1P0CX10 437 aa2.91□□□□□ -1.94
VPS35YJL154C ERR2P0CX11 437 aa2.91□□□□□ -1.94
VPS35YJL154C HSV2P50079 448 aaPredicted RBP2.91□□□□□ -1.94
VPS35YJL154C NPL3Q01560 414 aaKnown RBP RIP-Chip data2.91□□□□□ -1.94not detected
VPS35YJL154C YPL034WQ03083 165 aa2.91□□□□□ -1.94
VPS35YJL154C TAF8Q03750 510 aa2.91□□□□□ -1.94
VPS35YJL154C YCK2P23292 546 aaKnown RBP2.9□□□□□ -1.94
VPS35YJL154C GTS1P40956 396 aa2.9□□□□□ -1.94
VPS35YJL154C MCA1Q08601 432 aa2.9□□□□□ -1.94
VPS35YJL154C TRE1Q08919 783 aa2.9□□□□□ -1.94
VPS35YJL154C HBN1Q96VH4 193 aa2.9□□□□□ -1.94
VPS35YJL154C GSY1P23337 708 aa2.9□□□□□ -1.95
VPS35YJL154C PTC7P38797 343 aa2.9□□□□□ -1.95
VPS35YJL154C LCD1Q04377 747 aa2.9□□□□□ -1.95
VPS35YJL154C YOR352WQ08816 343 aa2.9□□□□□ -1.95
VPS35YJL154C SPS1P08458 490 aa2.89□□□□□ -1.95
VPS35YJL154C ADP1P25371 1049 aa2.89□□□□□ -1.95
VPS35YJL154C DSS1P39112 969 aa2.89□□□□□ -1.95
VPS35YJL154C CCM1P48237 864 aaPredicted RBP2.89□□□□□ -1.95
VPS35YJL154C NIT3P49954 291 aa2.89□□□□□ -1.95
VPS35YJL154C YGR130CP53278 816 aa2.89□□□□□ -1.95
VPS35YJL154C PPM2Q08282 695 aa2.89□□□□□ -1.95
VPS35YJL154C OSW2Q12202 724 aa2.89□□□□□ -1.95
VPS35YJL154C SVS1Q12254 260 aa2.89□□□□□ -1.95
VPS35YJL154C DBP2P24783 546 aaKnown RBP2.89□□□□□ -1.95
VPS35YJL154C RTA1P53047 317 aa2.89□□□□□ -1.95
VPS35YJL154C RSC58Q07979 502 aa2.89□□□□□ -1.95
VPS35YJL154C BI4P03879 638 aa2.88□□□□□ -1.95
VPS35YJL154C PHR1P05066 565 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
VPS35YJL154C KIN2P13186 1147 aaKnown RBP2.88□□□□□ -1.95
VPS35YJL154C MSD1P15179 658 aaKnown RBP2.88□□□□□ -1.95
VPS35YJL154C RFA1P22336 621 aaKnown RBP2.88□□□□□ -1.95
VPS35YJL154C SLA2P33338 968 aa2.88□□□□□ -1.95
VPS35YJL154C PET10P36139 283 aa2.88□□□□□ -1.95
VPS35YJL154C VPS30Q02948 557 aa2.88□□□□□ -1.95
VPS35YJL154C YLR122CQ12312 125 aa2.88□□□□□ -1.95
VPS35YJL154C CYC7P00045 113 aa2.88□□□□□ -1.95
VPS35YJL154C SNF5P18480 905 aa2.88□□□□□ -1.95
VPS35YJL154C CDC12P32468 407 aaKnown RBP2.88□□□□□ -1.95
VPS35YJL154C HBS1P32769 611 aaKnown RBP2.88□□□□□ -1.95
VPS35YJL154C REC104P33323 182 aa2.88□□□□□ -1.95
VPS35YJL154C SKN7P38889 622 aa2.88□□□□□ -1.95
VPS35YJL154C SIT1P39980 628 aa2.88□□□□□ -1.95
VPS35YJL154C YER158CP40095 573 aa2.88□□□□□ -1.95
VPS35YJL154C YFL054CP43549 646 aa2.88□□□□□ -1.95
VPS35YJL154C UBP6P43593 499 aaKnown RBP2.88□□□□□ -1.95
VPS35YJL154C RSM24Q03976 319 aa2.88□□□□□ -1.95
VPS35YJL154C HRQ1Q05549 1077 aa2.88□□□□□ -1.95
VPS35YJL154C TOP3P13099 656 aa2.87□□□□□ -1.95
VPS35YJL154C APL1P27351 700 aa2.87□□□□□ -1.95
VPS35YJL154C BET3P36149 193 aa2.87□□□□□ -1.95
VPS35YJL154C RFC5P38251 354 aa2.87□□□□□ -1.95
VPS35YJL154C RRT14P40470 206 aa2.87□□□□□ -1.95
VPS35YJL154C ALG2P43636 503 aa2.87□□□□□ -1.95
VPS35YJL154C MAP1Q01662 387 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95not detected
VPS35YJL154C SRM1P21827 482 aa2.87□□□□□ -1.95
VPS35YJL154C RAD53P22216 821 aa2.87□□□□□ -1.95
VPS35YJL154C PEX6P33760 1030 aa2.87□□□□□ -1.95
VPS35YJL154C GDH3P39708 457 aa2.87□□□□□ -1.95
VPS35YJL154C OYE3P41816 400 aaPredicted RBP2.87□□□□□ -1.95
VPS35YJL154C SSY1Q03770 852 aa2.87□□□□□ -1.95
VPS35YJL154C MED7Q08278 222 aa2.87□□□□□ -1.95
VPS35YJL154C YLL058WQ12198 575 aa2.87□□□□□ -1.95
VPS35YJL154C RPS9AO13516 197 aaKnown RBP2.87□□□□□ -1.95
VPS35YJL154C SAM35P14693 329 aa2.87□□□□□ -1.95
VPS35YJL154C CDC48P25694 835 aaKnown RBP2.87□□□□□ -1.95
VPS35YJL154C MSH2P25847 964 aa2.87□□□□□ -1.95
VPS35YJL154C FUN30P31380 1131 aa2.87□□□□□ -1.95
VPS35YJL154C BAP2P38084 609 aa2.87□□□□□ -1.95
VPS35YJL154C SEC26P41810 973 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms