RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W ORC6P38826 435 aa8.23□□□□□ -1.09
PEX28YHR150W MIC19P43594 170 aa8.23□□□□□ -1.09
PEX28YHR150W SOV1Q04748 898 aa8.23□□□□□ -1.09
PEX28YHR150W ADY4Q05955 493 aa8.23□□□□□ -1.09
PEX28YHR150W SFH1Q06168 426 aa8.23□□□□□ -1.09
PEX28YHR150W YLH47Q06493 454 aa8.23□□□□□ -1.09
PEX28YHR150W CBP1P07252 654 aa8.22□□□□□ -1.09
PEX28YHR150W RAD53P22216 821 aa8.22□□□□□ -1.09
PEX28YHR150W THI6P41835 540 aa8.22□□□□□ -1.09
PEX28YHR150W RET3P53600 189 aa8.22□□□□□ -1.09
PEX28YHR150W SUE1Q06524 206 aa8.22□□□□□ -1.09
PEX28YHR150W RUD3Q12234 484 aaKnown RBP8.22□□□□□ -1.09
PEX28YHR150W TUB2P02557 457 aaKnown RBP8.21□□□□□ -1.09
PEX28YHR150W GSY1P23337 708 aa8.21□□□□□ -1.09
PEX28YHR150W UTP7P40055 554 aaKnown RBP8.21□□□□□ -1.09
PEX28YHR150W ATG32P40458 529 aa8.21□□□□□ -1.09
PEX28YHR150W FET4P40988 552 aa8.21□□□□□ -1.09
PEX28YHR150W CIT3P43635 486 aa8.21□□□□□ -1.09
PEX28YHR150W UTP4Q06679 776 aaKnown RBP8.21□□□□□ -1.09
PEX28YHR150W FOB1O13329 566 aa8.2□□□□□ -1.1
PEX28YHR150W RAD1P06777 1100 aa8.2□□□□□ -1.1
PEX28YHR150W MIP1P15801 1254 aa8.2□□□□□ -1.1
PEX28YHR150W CKI1P20485 582 aa8.2□□□□□ -1.1
PEX28YHR150W GLC3P32775 704 aa8.2□□□□□ -1.1
PEX28YHR150W CNS1P33313 385 aa8.2□□□□□ -1.1
PEX28YHR150W PTC4P38089 393 aa8.2□□□□□ -1.1
PEX28YHR150W NIT1P40447 199 aa8.2□□□□□ -1.1
PEX28YHR150W YGR273CP53329 174 aa8.2□□□□□ -1.1
PEX28YHR150W OXR1Q08952 273 aa8.2□□□□□ -1.1
PEX28YHR150W RMP1Q12530 201 aa8.2□□□□□ -1.1
PEX28YHR150W YOL087CQ99247 1116 aa8.2□□□□□ -1.1
PEX28YHR150W KEL1P38853 1164 aaKnown RBP8.2□□□□□ -1.1
PEX28YHR150W ECM1P39715 212 aa8.2□□□□□ -1.1
PEX28YHR150W CCM1P48237 864 aaPredicted RBP8.2□□□□□ -1.1
PEX28YHR150W FPK1P53739 893 aa8.2□□□□□ -1.1
PEX28YHR150W AIM33Q04516 312 aa8.2□□□□□ -1.1
PEX28YHR150W NUR1Q12066 484 aa8.2□□□□□ -1.1
PEX28YHR150W TUS1Q06412 1307 aa8.19□□□□□ -1.1
PEX28YHR150W KRS1P15180 591 aaKnown RBP8.19□□□□□ -1.1
PEX28YHR150W ISY1P21374 235 aaPredicted RBP8.19□□□□□ -1.1
PEX28YHR150W NFU1P32860 256 aa8.19□□□□□ -1.1
PEX28YHR150W MED8P38304 223 aa8.19□□□□□ -1.1
PEX28YHR150W TPS3P38426 1054 aaKnown RBP8.19□□□□□ -1.1
PEX28YHR150W YMR124WP39523 943 aaKnown RBP8.19□□□□□ -1.1
PEX28YHR150W YGR117CP53270 476 aa8.19□□□□□ -1.1
PEX28YHR150W CBK1P53894 756 aa8.19□□□□□ -1.1
PEX28YHR150W OPY2Q06810 360 aa8.19□□□□□ -1.1
PEX28YHR150W NOP6Q07623 225 aaKnown RBP8.19□□□□□ -1.1
PEX28YHR150W YOR223WQ12015 292 aa8.19□□□□□ -1.1
PEX28YHR150W SMC6Q12749 1114 aa8.19□□□□□ -1.1
PEX28YHR150W RPC53P25441 422 aa8.18□□□□□ -1.1
PEX28YHR150W XRS2P33301 854 aa8.18□□□□□ -1.1
PEX28YHR150W SMC2P38989 1170 aaKnown RBP8.18□□□□□ -1.1
PEX28YHR150W TOS3P43637 560 aa8.18□□□□□ -1.1
PEX28YHR150W PLP2Q12017 286 aa8.18□□□□□ -1.1
PEX28YHR150W CDC8P00572 216 aa8.17□□□□□ -1.1
PEX28YHR150W TUP1P16649 713 aa8.17□□□□□ -1.1
PEX28YHR150W KIC1P38692 1080 aa8.17□□□□□ -1.1
PEX28YHR150W TAD1P53065 400 aa8.17□□□□□ -1.1
PEX28YHR150W YMR114CQ04471 368 aaKnown RBP8.17□□□□□ -1.1
PEX28YHR150W ILV1P00927 576 aaKnown RBP8.17□□□□□ -1.1
PEX28YHR150W ERG12P07277 443 aa8.17□□□□□ -1.1
PEX28YHR150W GFA1P14742 717 aaKnown RBP8.17□□□□□ -1.1
PEX28YHR150W RAM2P29703 316 aa8.17□□□□□ -1.1
PEX28YHR150W HXT1P32465 570 aa8.17□□□□□ -1.1
PEX28YHR150W PPS1P38148 807 aa8.17□□□□□ -1.1
PEX28YHR150W SUL1P38359 859 aa8.17□□□□□ -1.1
PEX28YHR150W SET5P38890 526 aaKnown RBP8.17□□□□□ -1.1
PEX28YHR150W ACA1P39970 489 aa8.17□□□□□ -1.1
PEX28YHR150W YJR079WP47126 109 aa8.17□□□□□ -1.1
PEX28YHR150W FMS1P50264 508 aa8.17□□□□□ -1.1
PEX28YHR150W CWC22P53333 577 aaKnown RBP8.17□□□□□ -1.1
PEX28YHR150W POB3Q04636 552 aaKnown RBP8.17□□□□□ -1.1
PEX28YHR150W THS1P04801 734 aaKnown RBP8.16□□□□□ -1.1
PEX28YHR150W YEL076C-AP0CX16 216 aa8.16□□□□□ -1.1
PEX28YHR150W YLR464WP0CX17 216 aa8.16□□□□□ -1.1
PEX28YHR150W SSB1P11484 613 aaKnown RBP8.16□□□□□ -1.1
PEX28YHR150W CKA2P19454 339 aa8.16□□□□□ -1.1
PEX28YHR150W SRO9P25567 434 aaKnown RBP8.16□□□□□ -1.1
PEX28YHR150W NDT80P38830 627 aa8.16□□□□□ -1.1
PEX28YHR150W YEL076CP39971 216 aa8.16□□□□□ -1.1
PEX28YHR150W SSB2P40150 613 aaKnown RBP8.16□□□□□ -1.1
PEX28YHR150W MAD1P40957 749 aa8.16□□□□□ -1.1
PEX28YHR150W EMP47P43555 445 aa8.16□□□□□ -1.1
PEX28YHR150W SIL1Q08199 421 aa8.16□□□□□ -1.1
PEX28YHR150W DAS2Q12084 232 aa8.16□□□□□ -1.1
PEX28YHR150W GAL2P13181 574 aa8.15□□□□□ -1.1
PEX28YHR150W SMC1P32908 1225 aa8.15□□□□□ -1.1
PEX28YHR150W JNM1P36224 373 aa8.15□□□□□ -1.1
PEX28YHR150W GAA1P39012 614 aa8.15□□□□□ -1.1
PEX28YHR150W DSN1P40568 576 aa8.15□□□□□ -1.1
PEX28YHR150W SOL4P53315 255 aa8.15□□□□□ -1.1
PEX28YHR150W VTC3Q02725 835 aa8.15□□□□□ -1.1
PEX28YHR150W BUL2Q03758 920 aaKnown RBP8.15□□□□□ -1.1
PEX28YHR150W URH1Q04179 340 aa8.15□□□□□ -1.1
PEX28YHR150W RKM4Q12504 494 aa8.15□□□□□ -1.1
PEX28YHR150W CDC60P26637 1090 aaKnown RBP8.15□□□□□ -1.11
PEX28YHR150W NIP100P33420 868 aa8.15□□□□□ -1.11
PEX28YHR150W MCD4P36051 919 aa8.15□□□□□ -1.11
PEX28YHR150W TIF4631P39935 952 aaKnown RBP8.15□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms