RNA–Protein interactions for RNA: YGL029W

CGR1, Protein involved in nucleolar integrity and processing of pre-rRNA, yeast

Gene CGR1, Length 363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CGR1	YGL029W	YDL121C	Q07541	149 aa		4.28	□□□□□ -1.72
CGR1	YGL029W	TY1A-GR1	Q12085	440 aa		4.28	□□□□□ -1.72
CGR1	YGL029W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.28	□□□□□ -1.72
CGR1	YGL029W	TY1A-OL	Q92392	440 aa	Known RBP	4.28	□□□□□ -1.72
CGR1	YGL029W	HBN1	Q96VH4	193 aa		4.28	□□□□□ -1.72
CGR1	YGL029W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
CGR1	YGL029W	TOP3	P13099	656 aa		4.27	□□□□□ -1.73
CGR1	YGL029W	GAS1	P22146	559 aa	Known RBP	4.27	□□□□□ -1.73
CGR1	YGL029W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
CGR1	YGL029W	NEM1	P38757	446 aa		4.27	□□□□□ -1.73
CGR1	YGL029W	PAN5	P38787	379 aa		4.27	□□□□□ -1.73
CGR1	YGL029W	SHU2	P38957	223 aa		4.27	□□□□□ -1.73
CGR1	YGL029W	SEC26	P41810	973 aa	Known RBP	4.27	□□□□□ -1.73
CGR1	YGL029W	PMT3	P47190	753 aa		4.27	□□□□□ -1.73
CGR1	YGL029W	RAT1	Q02792	1006 aa	Known RBP	4.27	□□□□□ -1.73
CGR1	YGL029W	SVL3	Q03088	825 aa	Known RBP	4.27	□□□□□ -1.73
CGR1	YGL029W	NUP145	P49687	1317 aa		4.26	□□□□□ -1.73
CGR1	YGL029W	THS1	P04801	734 aa	Known RBP	4.26	□□□□□ -1.73
CGR1	YGL029W	PIF1	P07271	859 aa		4.26	□□□□□ -1.73
CGR1	YGL029W	SYP1	P25623	870 aa	Known RBP	4.26	□□□□□ -1.73
CGR1	YGL029W	AFG2	P32794	780 aa		4.26	□□□□□ -1.73
CGR1	YGL029W	YKL107W	P34251	309 aa		4.26	□□□□□ -1.73
CGR1	YGL029W	SIP5	P40210	489 aa	Known RBP	4.26	□□□□□ -1.73
CGR1	YGL029W	MPH1	P40562	993 aa		4.26	□□□□□ -1.73
CGR1	YGL029W	YGL176C	P46945	554 aa		4.26	□□□□□ -1.73
CGR1	YGL029W	YJL181W	P46987	611 aa		4.26	□□□□□ -1.73
CGR1	YGL029W	HLJ1	P48353	224 aa		4.26	□□□□□ -1.73
CGR1	YGL029W	PRP43	P53131	767 aa	Known RBP	4.26	□□□□□ -1.73
CGR1	YGL029W	COG6	P53959	839 aa		4.26	□□□□□ -1.73
CGR1	YGL029W	TGL2	P54857	326 aa		4.26	□□□□□ -1.73
CGR1	YGL029W	UME1	Q03010	460 aa		4.26	□□□□□ -1.73
CGR1	YGL029W	CEF1	Q03654	590 aa	Predicted RBP	4.26	□□□□□ -1.73
CGR1	YGL029W	HTS1	P07263	546 aa	Known RBP	4.25	□□□□□ -1.73
CGR1	YGL029W	CCC2	P38995	1004 aa		4.25	□□□□□ -1.73
CGR1	YGL029W	MGS1	P40151	587 aa		4.25	□□□□□ -1.73
CGR1	YGL029W	CNN1	P43618	361 aa		4.25	□□□□□ -1.73
CGR1	YGL029W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
CGR1	YGL029W	YRB30	P53107	440 aa	Predicted RBP	4.25	□□□□□ -1.73
CGR1	YGL029W	BIO5	P53744	561 aa	Known RBP	4.25	□□□□□ -1.73
CGR1	YGL029W	UTP5	Q04177	643 aa	Known RBP	4.25	□□□□□ -1.73
CGR1	YGL029W	EST2	Q06163	884 aa		4.25	□□□□□ -1.73
CGR1	YGL029W	RSC2	Q06488	889 aa		4.25	□□□□□ -1.73
CGR1	YGL029W	THI73	Q07904	523 aa		4.25	□□□□□ -1.73
CGR1	YGL029W	SLX4	Q12098	748 aa		4.25	□□□□□ -1.73
CGR1	YGL029W	ATP4	P05626	244 aa		4.24	□□□□□ -1.73
CGR1	YGL029W	GEM1	P39722	662 aa		4.24	□□□□□ -1.73
CGR1	YGL029W	IES5	P40060	125 aa		4.24	□□□□□ -1.73
CGR1	YGL029W	INP51	P40559	946 aa	Known RBP	4.24	□□□□□ -1.73
CGR1	YGL029W	UBP6	P43593	499 aa	Known RBP	4.24	□□□□□ -1.73
CGR1	YGL029W	YJR124C	P47159	448 aa		4.24	□□□□□ -1.73
CGR1	YGL029W	CDA2	Q06703	312 aa		4.24	□□□□□ -1.73
CGR1	YGL029W	SOG2	Q08817	791 aa		4.24	□□□□□ -1.73
CGR1	YGL029W	GIN4	Q12263	1142 aa		4.24	□□□□□ -1.73
CGR1	YGL029W	TMA7	Q3E764	64 aa	Known RBP	4.24	□□□□□ -1.73
CGR1	YGL029W	DED1	P06634	604 aa	Known RBP	4.23	□□□□□ -1.73
CGR1	YGL029W	KAR1	P11927	433 aa		4.23	□□□□□ -1.73
CGR1	YGL029W	MSD1	P15179	658 aa	Known RBP	4.23	□□□□□ -1.73
CGR1	YGL029W	YBR071W	P38243	211 aa		4.23	□□□□□ -1.73
CGR1	YGL029W	FET4	P40988	552 aa		4.23	□□□□□ -1.73
CGR1	YGL029W	GPP1	P41277	250 aa	Known RBP	4.23	□□□□□ -1.73
CGR1	YGL029W	SLS1	P42900	643 aa		4.23	□□□□□ -1.73
CGR1	YGL029W	HNT2	P49775	206 aa		4.23	□□□□□ -1.73
CGR1	YGL029W	YNR065C	P53751	1116 aa		4.23	□□□□□ -1.73
CGR1	YGL029W	BUL2	Q03758	920 aa	Known RBP	4.23	□□□□□ -1.73
CGR1	YGL029W	RKM2	Q03942	479 aa		4.23	□□□□□ -1.73
CGR1	YGL029W	SND1	Q04007	877 aa		4.23	□□□□□ -1.73
CGR1	YGL029W	ECM16	Q04217	1267 aa	Known RBP	4.23	□□□□□ -1.73
CGR1	YGL029W	NKP1	Q12493	238 aa		4.23	□□□□□ -1.73
CGR1	YGL029W	TOM70	P07213	617 aa	Known RBP	4.22	□□□□□ -1.73
CGR1	YGL029W	EUG1	P32474	517 aa		4.22	□□□□□ -1.73
CGR1	YGL029W	TSA1	P34760	196 aa	Known RBP	4.22	□□□□□ -1.73
CGR1	YGL029W	THI80	P35202	319 aa		4.22	□□□□□ -1.73
CGR1	YGL029W	ADD66	P36040	267 aa		4.22	□□□□□ -1.73
CGR1	YGL029W	YKL077W	P36081	392 aa		4.22	□□□□□ -1.73
CGR1	YGL029W	PET10	P36139	283 aa		4.22	□□□□□ -1.73
CGR1	YGL029W	MCM7	P38132	845 aa		4.22	□□□□□ -1.73
CGR1	YGL029W	SIT1	P39980	628 aa		4.22	□□□□□ -1.73
CGR1	YGL029W	POL5	P39985	1022 aa	Known RBP	4.22	□□□□□ -1.73
CGR1	YGL029W	YNL034W	P53963	612 aa		4.22	□□□□□ -1.73
CGR1	YGL029W	YNL018C	P53976	612 aa		4.22	□□□□□ -1.73
CGR1	YGL029W	YIG1	Q08956	461 aa		4.22	□□□□□ -1.73
CGR1	YGL029W	TRX2	P22803	104 aa	Known RBP	4.21	□□□□□ -1.74
CGR1	YGL029W	VBA3	P25594	458 aa		4.21	□□□□□ -1.74
CGR1	YGL029W	AFR1	P33304	620 aa		4.21	□□□□□ -1.74
CGR1	YGL029W	MAE1	P36013	669 aa	Known RBP	4.21	□□□□□ -1.74
CGR1	YGL029W	YBR284W	P38150	797 aa		4.21	□□□□□ -1.74
CGR1	YGL029W	RGD1	P38339	666 aa		4.21	□□□□□ -1.74
CGR1	YGL029W	DSS1	P39112	969 aa		4.21	□□□□□ -1.74
CGR1	YGL029W	UTP22	P53254	1237 aa	Predicted RBP	4.21	□□□□□ -1.74
CGR1	YGL029W	SDA1	P53313	767 aa	Known RBP	4.21	□□□□□ -1.74
CGR1	YGL029W	HAS1	Q03532	505 aa	Known RBP	4.21	□□□□□ -1.74
CGR1	YGL029W	SPO71	Q03868	1245 aa		4.21	□□□□□ -1.74
CGR1	YGL029W	TMA64	Q04600	565 aa	Known RBP	4.21	□□□□□ -1.74
CGR1	YGL029W	FAP7	Q12055	197 aa	Predicted RBP	4.21	□□□□□ -1.74
CGR1	YGL029W	GNT1	Q12096	491 aa		4.21	□□□□□ -1.74
CGR1	YGL029W	CDC9	P04819	755 aa		4.2	□□□□□ -1.74
CGR1	YGL029W	PLC1	P32383	869 aa		4.2	□□□□□ -1.74
CGR1	YGL029W	HIR1	P32479	840 aa		4.2	□□□□□ -1.74
CGR1	YGL029W	BAP2	P38084	609 aa		4.2	□□□□□ -1.74
CGR1	YGL029W	ARL1	P38116	183 aa	Known RBP	4.2	□□□□□ -1.74

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