RNA–Protein interactions for RNA: YDR525W

API2, Transcript of Dubious open reading frame, yeast

Gene API2, Length 330 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
API2	YDR525W	PCL8	Q08966	492 aa		4.95	□□□□□ -1.62
API2	YDR525W	TUB2	P02557	457 aa	Known RBP	4.94	□□□□□ -1.62
API2	YDR525W	CDC3	P32457	520 aa	Known RBP	4.94	□□□□□ -1.62
API2	YDR525W	ALG14	P38242	237 aa		4.94	□□□□□ -1.62
API2	YDR525W	MCX1	P38323	520 aa	Predicted RBP	4.94	□□□□□ -1.62
API2	YDR525W	NIT1	P40447	199 aa		4.94	□□□□□ -1.62
API2	YDR525W	SEN54	Q02825	467 aa	Predicted RBP	4.94	□□□□□ -1.62
API2	YDR525W	SLP1	Q12232	587 aa		4.94	□□□□□ -1.62
API2	YDR525W	LSO1	Q3E827	93 aa		4.94	□□□□□ -1.62
API2	YDR525W	CHO2	P05374	869 aa	Known RBP	4.93	□□□□□ -1.62
API2	YDR525W	VAS1	P07806	1104 aa	Known RBP	4.93	□□□□□ -1.62
API2	YDR525W	MSN1	P22148	382 aa		4.93	□□□□□ -1.62
API2	YDR525W	ADP1	P25371	1049 aa		4.93	□□□□□ -1.62
API2	YDR525W	MDJ1	P35191	511 aa		4.93	□□□□□ -1.62
API2	YDR525W	FKS1	P38631	1876 aa	Known RBP	4.93	□□□□□ -1.62
API2	YDR525W	AIM46	P38885	310 aa		4.93	□□□□□ -1.62
API2	YDR525W	RTS1	P38903	757 aa		4.93	□□□□□ -1.62
API2	YDR525W	PNT1	P38969	423 aa		4.93	□□□□□ -1.62
API2	YDR525W	STM1	P39015	273 aa	Known RBP	4.93	□□□□□ -1.62
API2	YDR525W	HXT13	P39924	564 aa		4.93	□□□□□ -1.62
API2	YDR525W	SUT1	P53032	299 aa	Known RBP	4.93	□□□□□ -1.62
API2	YDR525W	UFD2	P54860	961 aa		4.93	□□□□□ -1.62
API2	YDR525W	SKG3	Q06315	1026 aa		4.93	□□□□□ -1.62
API2	YDR525W	TDA6	Q06466	467 aa		4.93	□□□□□ -1.62
API2	YDR525W	PMA1	P05030	918 aa	Known RBP	4.92	□□□□□ -1.62
API2	YDR525W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
API2	YDR525W	MYO3	P36006	1272 aa		4.92	□□□□□ -1.62
API2	YDR525W	RAD55	P38953	406 aa		4.92	□□□□□ -1.62
API2	YDR525W	YPL260W	Q08977	551 aa		4.92	□□□□□ -1.62
API2	YDR525W	KEL3	Q08979	651 aa	Predicted RBP	4.92	□□□□□ -1.62
API2	YDR525W	HVG1	P0CE11	249 aa		4.91	□□□□□ -1.62
API2	YDR525W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
API2	YDR525W	PRE8	P23639	250 aa		4.91	□□□□□ -1.62
API2	YDR525W	PRO3	P32263	286 aa	Known RBP	4.91	□□□□□ -1.62
API2	YDR525W	TAT1	P38085	619 aa		4.91	□□□□□ -1.62
API2	YDR525W	TIF4631	P39935	952 aa	Known RBP	4.91	□□□□□ -1.62
API2	YDR525W	NTA1	P40354	457 aa		4.91	□□□□□ -1.62
API2	YDR525W	PRK1	P40494	810 aa		4.91	□□□□□ -1.62
API2	YDR525W	LEM3	P42838	414 aa		4.91	□□□□□ -1.62
API2	YDR525W	YFL066C	P43538	392 aa		4.91	□□□□□ -1.62
API2	YDR525W	RRT6	P53117	311 aa	Predicted RBP	4.91	□□□□□ -1.62
API2	YDR525W	HDA1	P53973	706 aa		4.91	□□□□□ -1.62
API2	YDR525W	SSF2	Q12153	453 aa	Predicted RBP	4.91	□□□□□ -1.62
API2	YDR525W	APC11	Q12157	165 aa		4.91	□□□□□ -1.62
API2	YDR525W	RAD61	Q99359	647 aa		4.91	□□□□□ -1.62
API2	YDR525W	ECM29	P38737	1868 aa		4.91	□□□□□ -1.62
API2	YDR525W	TUS1	Q06412	1307 aa		4.91	□□□□□ -1.62
API2	YDR525W	TRL1	P09880	827 aa	Known RBP	4.9	□□□□□ -1.63
API2	YDR525W	IDI1	P15496	288 aa		4.9	□□□□□ -1.63
API2	YDR525W	SRM1	P21827	482 aa		4.9	□□□□□ -1.63
API2	YDR525W	PGM2	P37012	569 aa	Known RBP	4.9	□□□□□ -1.63
API2	YDR525W	YBL028C	P38202	106 aa		4.9	□□□□□ -1.63
API2	YDR525W	BSD2	P38356	321 aa		4.9	□□□□□ -1.63
API2	YDR525W	TPS3	P38426	1054 aa	Known RBP	4.9	□□□□□ -1.63
API2	YDR525W	CRG1	P38892	291 aa	RIP-Chip data	4.9	□□□□□ -1.63	not detected
API2	YDR525W	VID27	P40157	782 aa		4.9	□□□□□ -1.63
API2	YDR525W	YIL165C	P40446	119 aa		4.9	□□□□□ -1.63
API2	YDR525W	SBE2	P42223	864 aa	Known RBP	4.9	□□□□□ -1.63
API2	YDR525W	ENP2	P48234	707 aa	Known RBP	4.9	□□□□□ -1.63
API2	YDR525W	RPS15	Q01855	142 aa	Known RBP	4.9	□□□□□ -1.63
API2	YDR525W	YDL124W	Q07551	312 aa	Known RBP	4.9	□□□□□ -1.63
API2	YDR525W	CHS3	P29465	1165 aa		4.89	□□□□□ -1.63
API2	YDR525W	MOT2	P34909	587 aa	Known RBP	4.89	□□□□□ -1.63
API2	YDR525W	RER2	P35196	286 aa		4.89	□□□□□ -1.63
API2	YDR525W	IRS4	P36115	615 aa	Known RBP	4.89	□□□□□ -1.63
API2	YDR525W	CST26	P38226	397 aa		4.89	□□□□□ -1.63
API2	YDR525W	ECM2	P38241	364 aa	Known RBP	4.89	□□□□□ -1.63
API2	YDR525W	CIC1	P38779	376 aa	Known RBP	4.89	□□□□□ -1.63
API2	YDR525W	LSB3	P43603	459 aa	Known RBP	4.89	□□□□□ -1.63
API2	YDR525W	ACF4	P47129	309 aa		4.89	□□□□□ -1.63
API2	YDR525W	SNU71	P53207	620 aa	Known RBP	4.89	□□□□□ -1.63
API2	YDR525W	YNR040W	P53736	256 aa		4.89	□□□□□ -1.63
API2	YDR525W	GIS4	Q04233	774 aa		4.89	□□□□□ -1.63
API2	YDR525W	FPR4	Q06205	392 aa	Predicted RBP	4.89	□□□□□ -1.63
API2	YDR525W	SPN1	Q06505	410 aa	Predicted RBP	4.89	□□□□□ -1.63
API2	YDR525W	GIN4	Q12263	1142 aa		4.89	□□□□□ -1.63
API2	YDR525W	PGA3	Q12746	312 aa	Known RBP	4.89	□□□□□ -1.63
API2	YDR525W	PEP3	P27801	918 aa		4.88	□□□□□ -1.63
API2	YDR525W	ANP1	P32629	500 aa		4.88	□□□□□ -1.63
API2	YDR525W	SLN1	P39928	1220 aa	Predicted RBP	4.88	□□□□□ -1.63
API2	YDR525W	ACA1	P39970	489 aa		4.88	□□□□□ -1.63
API2	YDR525W	PPT1	P53043	513 aa		4.88	□□□□□ -1.63
API2	YDR525W	ATG1	P53104	897 aa		4.88	□□□□□ -1.63
API2	YDR525W	DUS1	P53759	423 aa	Known RBP	4.88	□□□□□ -1.63
API2	YDR525W	MYO5	Q04439	1219 aa	Known RBP	4.88	□□□□□ -1.63
API2	YDR525W	SBP1	P10080	294 aa	Known RBP	4.87	□□□□□ -1.63
API2	YDR525W	SAC7	P17121	654 aa		4.87	□□□□□ -1.63
API2	YDR525W	SRP54	P20424	541 aa	Known RBP	4.87	□□□□□ -1.63
API2	YDR525W	NAR1	P23503	491 aa	Known RBP	4.87	□□□□□ -1.63
API2	YDR525W	SKN7	P38889	622 aa		4.87	□□□□□ -1.63
API2	YDR525W	RRP8	P38961	392 aa	Known RBP	4.87	□□□□□ -1.63
API2	YDR525W	PSY2	P40164	858 aa		4.87	□□□□□ -1.63
API2	YDR525W	CSM2	P40465	213 aa		4.87	□□□□□ -1.63
API2	YDR525W	QDR1	P40475	563 aa		4.87	□□□□□ -1.63
API2	YDR525W	SPO22	P40511	975 aa		4.87	□□□□□ -1.63
API2	YDR525W	YIR014W	P40570	242 aa		4.87	□□□□□ -1.63
API2	YDR525W	GUP1	P53154	560 aa		4.87	□□□□□ -1.63
API2	YDR525W	MRD1	Q06106	887 aa	Known RBP	4.87	□□□□□ -1.63
API2	YDR525W	TFC6	Q06339	672 aa		4.87	□□□□□ -1.63
API2	YDR525W	FBP1	P09201	348 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 33 ms