RNA–Protein interactions for RNA: YDR317W

HIM1, Transcript of Protein of unknown function involved in DNA repair, yeast

Gene HIM1, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HIM1	YDR317W	NOP7	P53261	605 aa	Known RBP	6.14	□□□□□ -1.43
HIM1	YDR317W	THI80	P35202	319 aa		6.13	□□□□□ -1.43
HIM1	YDR317W	VBA5	P36172	582 aa		6.13	□□□□□ -1.43
HIM1	YDR317W	PLB2	Q03674	706 aa		6.13	□□□□□ -1.43
HIM1	YDR317W	HRQ1	Q05549	1077 aa		6.13	□□□□□ -1.43
HIM1	YDR317W	XYL2	Q07993	356 aa		6.13	□□□□□ -1.43
HIM1	YDR317W	GAL10	P04397	699 aa		6.12	□□□□□ -1.43
HIM1	YDR317W	CMP2	P14747	604 aa		6.12	□□□□□ -1.43
HIM1	YDR317W	ACE2	P21192	770 aa		6.12	□□□□□ -1.43
HIM1	YDR317W	AGP1	P25376	633 aa		6.12	□□□□□ -1.43
HIM1	YDR317W	RFC5	P38251	354 aa		6.12	□□□□□ -1.43
HIM1	YDR317W	HFM1	P51979	1187 aa		6.12	□□□□□ -1.43
HIM1	YDR317W	MTC3	P53077	123 aa		6.12	□□□□□ -1.43
HIM1	YDR317W	ROT1	Q03691	256 aa		6.12	□□□□□ -1.43
HIM1	YDR317W	SBA1	P28707	216 aa	Known RBP	6.11	□□□□□ -1.43
HIM1	YDR317W	STE5	P32917	917 aa		6.11	□□□□□ -1.43
HIM1	YDR317W	SNO2	P53823	222 aa		6.11	□□□□□ -1.43
HIM1	YDR317W	YPL277C	Q08989	487 aa		6.11	□□□□□ -1.43
HIM1	YDR317W	APL1	P27351	700 aa		6.1	□□□□□ -1.43
HIM1	YDR317W	GEM1	P39722	662 aa		6.1	□□□□□ -1.43
HIM1	YDR317W	UBP5	P39944	805 aa		6.1	□□□□□ -1.43
HIM1	YDR317W	SPF1	P39986	1215 aa	Known RBP	6.1	□□□□□ -1.43
HIM1	YDR317W	NPP2	P39997	493 aa		6.1	□□□□□ -1.43
HIM1	YDR317W	ATG13	Q06628	738 aa		6.1	□□□□□ -1.43
HIM1	YDR317W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	6.1	□□□□□ -1.43	not detected
HIM1	YDR317W	SSF2	Q12153	453 aa	Predicted RBP	6.1	□□□□□ -1.43
HIM1	YDR317W	PRP6	P19735	899 aa	Predicted RBP	6.09	□□□□□ -1.43
HIM1	YDR317W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	6.09	□□□□□ -1.43	not detected
HIM1	YDR317W	YDR132C	Q03900	495 aa		6.09	□□□□□ -1.43
HIM1	YDR317W	RSM24	Q03976	319 aa		6.09	□□□□□ -1.43
HIM1	YDR317W	SGD1	Q06132	899 aa		6.09	□□□□□ -1.43
HIM1	YDR317W	RPS13	P05756	151 aa	Known RBP	6.08	□□□□□ -1.44
HIM1	YDR317W	LAM1	P38851	1228 aa		6.08	□□□□□ -1.44
HIM1	YDR317W	KRI1	P42846	591 aa	Known RBP	6.08	□□□□□ -1.44
HIM1	YDR317W	TOD6	P34219	525 aa		6.07	□□□□□ -1.44
HIM1	YDR317W	MEF2	P39677	819 aa		6.07	□□□□□ -1.44
HIM1	YDR317W	TDA5	Q06417	326 aa	Known RBP	6.07	□□□□□ -1.44
HIM1	YDR317W	TAT2	P38967	592 aa		6.06	□□□□□ -1.44
HIM1	YDR317W	TAF1	P46677	1066 aa		6.06	□□□□□ -1.44
HIM1	YDR317W	SHE9	Q04172	456 aa		6.06	□□□□□ -1.44
HIM1	YDR317W	SIZ1	Q04195	904 aa		6.06	□□□□□ -1.44
HIM1	YDR317W	MDM38	Q08179	573 aa		6.06	□□□□□ -1.44
HIM1	YDR317W	HIR3	P47171	1648 aa		6.06	□□□□□ -1.44
HIM1	YDR317W	GIC1	P38785	314 aa		6.05	□□□□□ -1.44
HIM1	YDR317W	SNF7	P39929	240 aa	Known RBP	6.05	□□□□□ -1.44
HIM1	YDR317W	GCV2	P49095	1034 aa		6.05	□□□□□ -1.44
HIM1	YDR317W	RIM8	P53179	542 aa		6.05	□□□□□ -1.44
HIM1	YDR317W	GTF1	P53260	183 aa	Predicted RBP	6.05	□□□□□ -1.44
HIM1	YDR317W	GCN5	Q03330	439 aa		6.05	□□□□□ -1.44
HIM1	YDR317W	MSC2	Q03455	724 aa		6.05	□□□□□ -1.44
HIM1	YDR317W	DUS3	Q06053	668 aa	Known RBP	6.05	□□□□□ -1.44
HIM1	YDR317W	DUS4	Q06063	367 aa		6.05	□□□□□ -1.44
HIM1	YDR317W	SOD2	P00447	233 aa		6.04	□□□□□ -1.44
HIM1	YDR317W	KIN2	P13186	1147 aa	Known RBP	6.04	□□□□□ -1.44
HIM1	YDR317W	CDC12	P32468	407 aa	Known RBP	6.04	□□□□□ -1.44
HIM1	YDR317W	ERT1	P38140	529 aa		6.04	□□□□□ -1.44
HIM1	YDR317W	YBR184W	P38299	523 aa		6.04	□□□□□ -1.44
HIM1	YDR317W	SAH1	P39954	449 aa	Known RBP	6.04	□□□□□ -1.44
HIM1	YDR317W	RRT14	P40470	206 aa		6.04	□□□□□ -1.44
HIM1	YDR317W	SPT20	P50875	604 aa		6.04	□□□□□ -1.44
HIM1	YDR317W	CDC6	P09119	513 aa		6.03	□□□□□ -1.44
HIM1	YDR317W	GRX1	P25373	110 aa	Known RBP	6.03	□□□□□ -1.44
HIM1	YDR317W	FLR1	P38124	548 aa		6.03	□□□□□ -1.44
HIM1	YDR317W	PFD1	P46988	109 aa		6.03	□□□□□ -1.44
HIM1	YDR317W	ENV11	P53246	860 aa		6.03	□□□□□ -1.44
HIM1	YDR317W	SFB2	P53953	876 aa		6.03	□□□□□ -1.44
HIM1	YDR317W	ECM5	Q03214	1411 aa		6.02	□□□□□ -1.45
HIM1	YDR317W	AFR1	P33304	620 aa		6.02	□□□□□ -1.45
HIM1	YDR317W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	6.02	□□□□□ -1.45	not detected
HIM1	YDR317W	SRT1	Q03175	343 aa		6.02	□□□□□ -1.45
HIM1	YDR317W	NPP1	P25353	742 aa		6.01	□□□□□ -1.45
HIM1	YDR317W	YAP1801	P38856	637 aa		6.01	□□□□□ -1.45
HIM1	YDR317W	YDR306C	Q06640	478 aa		6.01	□□□□□ -1.45
HIM1	YDR317W	ESC8	Q08119	714 aa		6.01	□□□□□ -1.45
HIM1	YDR317W	YOR352W	Q08816	343 aa		6.01	□□□□□ -1.45
HIM1	YDR317W	THS1	P04801	734 aa	Known RBP	6	□□□□□ -1.45
HIM1	YDR317W	MRP8	P35719	219 aa		6	□□□□□ -1.45
HIM1	YDR317W	WRS1	Q12109	432 aa	Known RBP	6	□□□□□ -1.45
HIM1	YDR317W	BUD4	P47136	1447 aa		5.99	□□□□□ -1.45
HIM1	YDR317W	SRP101	P32916	621 aa		5.99	□□□□□ -1.45
HIM1	YDR317W	IRR1	P40541	1150 aa		5.99	□□□□□ -1.45
HIM1	YDR317W	YAP6	Q03935	383 aa		5.99	□□□□□ -1.45
HIM1	YDR317W	FMP25	Q08023	583 aa		5.99	□□□□□ -1.45
HIM1	YDR317W	OSW2	Q12202	724 aa		5.99	□□□□□ -1.45
HIM1	YDR317W	XRN1	P22147	1528 aa	Known RBP	5.99	□□□□□ -1.45
HIM1	YDR317W	THO2	P53552	1597 aa	Known RBP	5.98	□□□□□ -1.45
HIM1	YDR317W	EMC1	P25574	760 aa		5.98	□□□□□ -1.45
HIM1	YDR317W	CDC20	P26309	610 aa		5.98	□□□□□ -1.45
HIM1	YDR317W	HBS1	P32769	611 aa	Known RBP	5.98	□□□□□ -1.45
HIM1	YDR317W	PBY1	P38254	753 aa		5.98	□□□□□ -1.45
HIM1	YDR317W	ZRG8	P40021	1076 aa		5.98	□□□□□ -1.45
HIM1	YDR317W	MND2	P40577	368 aa		5.98	□□□□□ -1.45
HIM1	YDR317W	UBX5	Q06682	500 aa		5.98	□□□□□ -1.45
HIM1	YDR317W	GPB1	Q08886	897 aa		5.98	□□□□□ -1.45
HIM1	YDR317W	YLL058W	Q12198	575 aa		5.98	□□□□□ -1.45
HIM1	YDR317W	ENA1	P13587	1091 aa		5.97	□□□□□ -1.45
HIM1	YDR317W	RAD4	P14736	754 aa		5.97	□□□□□ -1.45
HIM1	YDR317W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5.97	□□□□□ -1.45	not detected
HIM1	YDR317W	TSL1	P38427	1098 aa	Known RBP	5.97	□□□□□ -1.45
HIM1	YDR317W	ENA2	Q01896	1091 aa		5.97	□□□□□ -1.45

Retrieved 100 of 5,963 RNA–protein pairs in 125.3 ms