RNA–Protein interactions for RNA: YDR295C

HDA2, Transcript of Subunit of the HDA1 histone deacetylase complex, yeast

Gene HDA2, Length 2,025 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HDA2	YDR295C	YGR161W-C	Q3E744	92 aa		4.28	□□□□□ -1.72
HDA2	YDR295C	RPL11B	Q3E757	174 aa	Predicted RBP	4.28	□□□□□ -1.72
HDA2	YDR295C	PWP2	P25635	923 aa	Known RBP	4.28	□□□□□ -1.73
HDA2	YDR295C	THI4	P32318	326 aa		4.28	□□□□□ -1.73
HDA2	YDR295C	SMY2	P32909	740 aa	Known RBP	4.28	□□□□□ -1.73
HDA2	YDR295C	MFT1	P33441	392 aa	Known RBP	4.28	□□□□□ -1.73
HDA2	YDR295C	VPS24	P36095	224 aa	Known RBP	4.28	□□□□□ -1.73
HDA2	YDR295C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.28	□□□□□ -1.73	not detected
HDA2	YDR295C	YNR014W	P53719	212 aa		4.28	□□□□□ -1.73
HDA2	YDR295C	CEF1	Q03654	590 aa	Predicted RBP	4.28	□□□□□ -1.73
HDA2	YDR295C	COG4	Q06096	861 aa		4.28	□□□□□ -1.73
HDA2	YDR295C	GRX7	P38068	203 aa		4.27	□□□□□ -1.73
HDA2	YDR295C	YBR284W	P38150	797 aa		4.27	□□□□□ -1.73
HDA2	YDR295C	FUI1	P38196	639 aa		4.27	□□□□□ -1.73
HDA2	YDR295C	HSE1	P38753	452 aa		4.27	□□□□□ -1.73
HDA2	YDR295C	CCC2	P38995	1004 aa		4.27	□□□□□ -1.73
HDA2	YDR295C	HUL4	P40985	892 aa		4.27	□□□□□ -1.73
HDA2	YDR295C	SPP382	Q06411	708 aa	Predicted RBP	4.27	□□□□□ -1.73
HDA2	YDR295C	YPL260W	Q08977	551 aa		4.27	□□□□□ -1.73
HDA2	YDR295C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
HDA2	YDR295C	MDJ1	P35191	511 aa		4.26	□□□□□ -1.73
HDA2	YDR295C	ERT1	P38140	529 aa		4.26	□□□□□ -1.73
HDA2	YDR295C	ALT1	P52893	592 aa		4.26	□□□□□ -1.73
HDA2	YDR295C	YDR306C	Q06640	478 aa		4.26	□□□□□ -1.73
HDA2	YDR295C	AFR1	P33304	620 aa		4.26	□□□□□ -1.73
HDA2	YDR295C	NNK1	P36003	928 aa		4.26	□□□□□ -1.73
HDA2	YDR295C	TDA6	Q06466	467 aa		4.26	□□□□□ -1.73
HDA2	YDR295C	AI1	P03875	834 aa		4.25	□□□□□ -1.73
HDA2	YDR295C	AI3	P03877	415 aa		4.25	□□□□□ -1.73
HDA2	YDR295C	TRX2	P22803	104 aa	Known RBP	4.25	□□□□□ -1.73
HDA2	YDR295C	YKL151C	P36059	337 aa		4.25	□□□□□ -1.73
HDA2	YDR295C	YEN1	P40028	759 aa		4.25	□□□□□ -1.73
HDA2	YDR295C	BUL2	Q03758	920 aa	Known RBP	4.25	□□□□□ -1.73
HDA2	YDR295C	RCL1	Q08096	367 aa	Predicted RBP	4.25	□□□□□ -1.73
HDA2	YDR295C	NTG2	Q08214	380 aa		4.25	□□□□□ -1.73
HDA2	YDR295C	PUS7	Q08647	676 aa	Known RBP	4.25	□□□□□ -1.73
HDA2	YDR295C	THS1	P04801	734 aa	Known RBP	4.24	□□□□□ -1.73
HDA2	YDR295C	MSD1	P15179	658 aa	Known RBP	4.24	□□□□□ -1.73
HDA2	YDR295C	SNF5	P18480	905 aa		4.24	□□□□□ -1.73
HDA2	YDR295C	MSH2	P25847	964 aa		4.24	□□□□□ -1.73
HDA2	YDR295C	SFA1	P32771	386 aa		4.24	□□□□□ -1.73
HDA2	YDR295C	NFU1	P32860	256 aa		4.24	□□□□□ -1.73
HDA2	YDR295C	SLA2	P33338	968 aa		4.24	□□□□□ -1.73
HDA2	YDR295C	SNF7	P39929	240 aa	Known RBP	4.24	□□□□□ -1.73
HDA2	YDR295C	PRY1	P47032	299 aa		4.24	□□□□□ -1.73
HDA2	YDR295C	ESF2	P53743	316 aa	Known RBP	4.24	□□□□□ -1.73
HDA2	YDR295C	TPP1	Q03796	238 aa		4.24	□□□□□ -1.73
HDA2	YDR295C	HRQ1	Q05549	1077 aa		4.24	□□□□□ -1.73
HDA2	YDR295C	DUS3	Q06053	668 aa	Known RBP	4.24	□□□□□ -1.73
HDA2	YDR295C	YDL124W	Q07551	312 aa	Known RBP	4.24	□□□□□ -1.73
HDA2	YDR295C	RPS4A	P0CX35	261 aa	Known RBP	4.24	□□□□□ -1.73
HDA2	YDR295C	RPS4B	P0CX36	261 aa	Known RBP	4.24	□□□□□ -1.73
HDA2	YDR295C	TRK2	P28584	889 aa		4.24	□□□□□ -1.73
HDA2	YDR295C	GDH3	P39708	457 aa		4.24	□□□□□ -1.73
HDA2	YDR295C	UTP14	Q04500	899 aa	Known RBP	4.24	□□□□□ -1.73
HDA2	YDR295C	THI72	Q08579	599 aa		4.24	□□□□□ -1.73
HDA2	YDR295C	MEF1	P25039	761 aa		4.23	□□□□□ -1.73
HDA2	YDR295C	NPP1	P25353	742 aa		4.23	□□□□□ -1.73
HDA2	YDR295C	CDC12	P32468	407 aa	Known RBP	4.23	□□□□□ -1.73
HDA2	YDR295C	YSC84	P32793	468 aa		4.23	□□□□□ -1.73
HDA2	YDR295C	MCX1	P38323	520 aa	Predicted RBP	4.23	□□□□□ -1.73
HDA2	YDR295C	SIT1	P39980	628 aa		4.23	□□□□□ -1.73
HDA2	YDR295C	RPN3	P40016	523 aa	Known RBP	4.23	□□□□□ -1.73
HDA2	YDR295C	HSV2	P50079	448 aa	Predicted RBP	4.23	□□□□□ -1.73
HDA2	YDR295C	ENT2	Q05785	613 aa		4.23	□□□□□ -1.73
HDA2	YDR295C	YDR215C	Q12240	137 aa		4.23	□□□□□ -1.73
HDA2	YDR295C	YPR071W	Q12346	211 aa		4.23	□□□□□ -1.73
HDA2	YDR295C	ERP4	Q12450	207 aa		4.23	□□□□□ -1.73
HDA2	YDR295C	DAL5	P15365	543 aa		4.22	□□□□□ -1.73
HDA2	YDR295C	YCK2	P23292	546 aa	Known RBP	4.22	□□□□□ -1.73
HDA2	YDR295C	NAM7	P30771	971 aa	Known RBP	4.22	□□□□□ -1.73
HDA2	YDR295C	PET10	P36139	283 aa		4.22	□□□□□ -1.73
HDA2	YDR295C	SLN1	P39928	1220 aa	Predicted RBP	4.22	□□□□□ -1.73
HDA2	YDR295C	IES1	P43579	692 aa		4.22	□□□□□ -1.73
HDA2	YDR295C	UBP6	P43593	499 aa	Known RBP	4.22	□□□□□ -1.73
HDA2	YDR295C	MPP10	P47083	593 aa	Known RBP	4.22	□□□□□ -1.73
HDA2	YDR295C	HRK1	Q08732	759 aa	Known RBP	4.22	□□□□□ -1.73
HDA2	YDR295C	NOP14	Q99207	810 aa	Known RBP	4.22	□□□□□ -1.73
HDA2	YDR295C	AAR2	P32357	355 aa	Predicted RBP	4.22	□□□□□ -1.73
HDA2	YDR295C	BAP2	P38084	609 aa		4.22	□□□□□ -1.73
HDA2	YDR295C	PAF1	P38351	445 aa		4.22	□□□□□ -1.73
HDA2	YDR295C	NPP2	P39997	493 aa		4.22	□□□□□ -1.73
HDA2	YDR295C	HOS3	Q02959	697 aa	Known RBP	4.22	□□□□□ -1.73
HDA2	YDR295C	TOM70	P07213	617 aa	Known RBP	4.21	□□□□□ -1.74
HDA2	YDR295C	MRC1	P25588	1096 aa		4.21	□□□□□ -1.74
HDA2	YDR295C	RSC6	P25632	483 aa		4.21	□□□□□ -1.74
HDA2	YDR295C	RPN12	P32496	274 aa		4.21	□□□□□ -1.74
HDA2	YDR295C	UGA2	P38067	497 aa		4.21	□□□□□ -1.74
HDA2	YDR295C	ARI1	P53111	347 aa	Known RBP	4.21	□□□□□ -1.74
HDA2	YDR295C	PEX8	P53248	589 aa		4.21	□□□□□ -1.74
HDA2	YDR295C	FOL1	P53848	824 aa		4.21	□□□□□ -1.74
HDA2	YDR295C	GIC2	Q06648	383 aa		4.21	□□□□□ -1.74
HDA2	YDR295C	ACM1	Q08981	209 aa		4.21	□□□□□ -1.74
HDA2	YDR295C	SAM35	P14693	329 aa		4.21	□□□□□ -1.74
HDA2	YDR295C	RPL8A	P17076	256 aa	Known RBP	4.21	□□□□□ -1.74
HDA2	YDR295C	DPB3	P27344	201 aa		4.21	□□□□□ -1.74
HDA2	YDR295C	PRO1	P32264	428 aa		4.21	□□□□□ -1.74
HDA2	YDR295C	MTC3	P53077	123 aa		4.21	□□□□□ -1.74
HDA2	YDR295C	YOR378W	Q08902	515 aa		4.21	□□□□□ -1.74
HDA2	YDR295C	YVC1	Q12324	675 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms