RNA–Protein interactions for RNA: YDR092W

UBC13, Transcript of E2 ubiquitin-conjugating enzyme, yeast

Gene UBC13, Length 462 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC13	YDR092W	MRPL22	P53881	309 aa		4.89	□□□□□ -1.63
UBC13	YDR092W	ESC2	Q06340	456 aa		4.89	□□□□□ -1.63
UBC13	YDR092W	BI4	P03879	638 aa		4.88	□□□□□ -1.63
UBC13	YDR092W	PRP9	P19736	530 aa	Known RBP	4.88	□□□□□ -1.63
UBC13	YDR092W	ETP1	P38748	585 aa	Known RBP	4.88	□□□□□ -1.63
UBC13	YDR092W	IRC24	P40580	263 aa		4.88	□□□□□ -1.63
UBC13	YDR092W	YFL054C	P43549	646 aa		4.88	□□□□□ -1.63
UBC13	YDR092W	NAN1	Q02931	896 aa	Known RBP	4.88	□□□□□ -1.63
UBC13	YDR092W	GRX1	P25373	110 aa	Known RBP	4.87	□□□□□ -1.63
UBC13	YDR092W	YKL069W	P36088	180 aa		4.87	□□□□□ -1.63
UBC13	YDR092W	NNF1	P47149	201 aa		4.87	□□□□□ -1.63
UBC13	YDR092W	SPO75	Q07798	868 aa		4.87	□□□□□ -1.63
UBC13	YDR092W	YDL177C	Q12257	170 aa		4.87	□□□□□ -1.63
UBC13	YDR092W	GAS1	P22146	559 aa	Known RBP	4.86	□□□□□ -1.63
UBC13	YDR092W	APL1	P27351	700 aa		4.86	□□□□□ -1.63
UBC13	YDR092W	MBP1	P39678	833 aa		4.86	□□□□□ -1.63
UBC13	YDR092W	SIZ1	Q04195	904 aa		4.86	□□□□□ -1.63
UBC13	YDR092W	SGD1	Q06132	899 aa		4.86	□□□□□ -1.63
UBC13	YDR092W	CYC1	P00044	109 aa	Predicted RBP	4.85	□□□□□ -1.63
UBC13	YDR092W	TSA1	P34760	196 aa	Known RBP	4.85	□□□□□ -1.63
UBC13	YDR092W	SAH1	P39954	449 aa	Known RBP	4.85	□□□□□ -1.63
UBC13	YDR092W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
UBC13	YDR092W	PBP1	P53297	722 aa	Known RBP	4.85	□□□□□ -1.63
UBC13	YDR092W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
UBC13	YDR092W	OSW2	Q12202	724 aa		4.85	□□□□□ -1.63
UBC13	YDR092W	ABZ1	P37254	787 aa	Predicted RBP	4.84	□□□□□ -1.63
UBC13	YDR092W	YBR184W	P38299	523 aa		4.84	□□□□□ -1.63
UBC13	YDR092W	RIM8	P53179	542 aa		4.84	□□□□□ -1.63
UBC13	YDR092W	DUS3	Q06053	668 aa	Known RBP	4.84	□□□□□ -1.63
UBC13	YDR092W	CDA2	Q06703	312 aa		4.84	□□□□□ -1.63
UBC13	YDR092W	MDM38	Q08179	573 aa		4.84	□□□□□ -1.63
UBC13	YDR092W	SOD2	P00447	233 aa		4.83	□□□□□ -1.64
UBC13	YDR092W	ADE8	P04161	214 aa		4.83	□□□□□ -1.64
UBC13	YDR092W	RPP2A	P05319	106 aa	Known RBP	4.83	□□□□□ -1.64
UBC13	YDR092W	PRP6	P19735	899 aa	Predicted RBP	4.83	□□□□□ -1.64
UBC13	YDR092W	FUN30	P31380	1131 aa		4.83	□□□□□ -1.64
UBC13	YDR092W	RPC82	P32349	654 aa		4.83	□□□□□ -1.64
UBC13	YDR092W	CDC11	P32458	415 aa		4.83	□□□□□ -1.64
UBC13	YDR092W	CDC12	P32468	407 aa	Known RBP	4.83	□□□□□ -1.64
UBC13	YDR092W	LAM1	P38851	1228 aa		4.83	□□□□□ -1.64
UBC13	YDR092W	MTC3	P53077	123 aa		4.83	□□□□□ -1.64
UBC13	YDR092W	MSC2	Q03455	724 aa		4.83	□□□□□ -1.64
UBC13	YDR092W	HRQ1	Q05549	1077 aa		4.83	□□□□□ -1.64
UBC13	YDR092W	YDR306C	Q06640	478 aa		4.83	□□□□□ -1.64
UBC13	YDR092W	OSH2	Q12451	1283 aa		4.83	□□□□□ -1.64
UBC13	YDR092W	CMP2	P14747	604 aa		4.82	□□□□□ -1.64
UBC13	YDR092W	PPH3	P32345	308 aa		4.82	□□□□□ -1.64
UBC13	YDR092W	AAR2	P32357	355 aa	Predicted RBP	4.82	□□□□□ -1.64
UBC13	YDR092W	STE5	P32917	917 aa		4.82	□□□□□ -1.64
UBC13	YDR092W	YKL151C	P36059	337 aa		4.82	□□□□□ -1.64
UBC13	YDR092W	YKR078W	P36158	585 aa	Known RBP	4.82	□□□□□ -1.64
UBC13	YDR092W	UBP5	P39944	805 aa		4.82	□□□□□ -1.64
UBC13	YDR092W	SIT1	P39980	628 aa		4.82	□□□□□ -1.64
UBC13	YDR092W	HFM1	P51979	1187 aa		4.82	□□□□□ -1.64
UBC13	YDR092W	ERP6	P53198	216 aa		4.82	□□□□□ -1.64
UBC13	YDR092W	UTP8	P53276	713 aa	Known RBP	4.82	□□□□□ -1.64
UBC13	YDR092W	SRT1	Q03175	343 aa		4.82	□□□□□ -1.64
UBC13	YDR092W	FMP25	Q08023	583 aa		4.82	□□□□□ -1.64
UBC13	YDR092W	GAL10	P04397	699 aa		4.81	□□□□□ -1.64
UBC13	YDR092W	RPS13	P05756	151 aa	Known RBP	4.81	□□□□□ -1.64
UBC13	YDR092W	RNQ1	P25367	405 aa		4.81	□□□□□ -1.64
UBC13	YDR092W	YAP1801	P38856	637 aa		4.81	□□□□□ -1.64
UBC13	YDR092W	TAT2	P38967	592 aa		4.81	□□□□□ -1.64
UBC13	YDR092W	MEF2	P39677	819 aa		4.81	□□□□□ -1.64
UBC13	YDR092W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
UBC13	YDR092W	RIB2	Q12362	591 aa	Known RBP	4.81	□□□□□ -1.64
UBC13	YDR092W	RAD4	P14736	754 aa		4.8	□□□□□ -1.64
UBC13	YDR092W	RPL8B	P29453	256 aa	Known RBP	4.8	□□□□□ -1.64
UBC13	YDR092W	PFD1	P46988	109 aa		4.8	□□□□□ -1.64
UBC13	YDR092W	GYP7	P48365	746 aa		4.8	□□□□□ -1.64
UBC13	YDR092W	GCN5	Q03330	439 aa		4.8	□□□□□ -1.64
UBC13	YDR092W	EAF1	Q06337	982 aa		4.8	□□□□□ -1.64
UBC13	YDR092W	RXT3	Q07458	294 aa		4.8	□□□□□ -1.64
UBC13	YDR092W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
UBC13	YDR092W	HSP60	P19882	572 aa	Known RBP	4.79	□□□□□ -1.64
UBC13	YDR092W	SRM1	P21827	482 aa		4.79	□□□□□ -1.64
UBC13	YDR092W	DOM34	P33309	386 aa		4.79	□□□□□ -1.64
UBC13	YDR092W	ECM21	P38167	1117 aa	Known RBP	4.79	□□□□□ -1.64
UBC13	YDR092W	AIM3	P38266	947 aa	Known RBP	4.79	□□□□□ -1.64
UBC13	YDR092W	GIC1	P38785	314 aa		4.79	□□□□□ -1.64
UBC13	YDR092W	ALR2	P43553	858 aa		4.79	□□□□□ -1.64
UBC13	YDR092W	ROT1	Q03691	256 aa		4.79	□□□□□ -1.64
UBC13	YDR092W	YPL277C	Q08989	487 aa		4.79	□□□□□ -1.64
UBC13	YDR092W	ARE1	P25628	610 aa		4.78	□□□□□ -1.64
UBC13	YDR092W	GGA2	P38817	585 aa	Known RBP	4.78	□□□□□ -1.64
UBC13	YDR092W	ZRG8	P40021	1076 aa		4.78	□□□□□ -1.64
UBC13	YDR092W	YER158C	P40095	573 aa		4.78	□□□□□ -1.64
UBC13	YDR092W	TIM54	P47045	478 aa		4.78	□□□□□ -1.64
UBC13	YDR092W	CCM1	P48237	864 aa	Predicted RBP	4.78	□□□□□ -1.64
UBC13	YDR092W	PSP2	P50109	593 aa	Known RBP	4.78	□□□□□ -1.64
UBC13	YDR092W	YDR132C	Q03900	495 aa		4.78	□□□□□ -1.64
UBC13	YDR092W	LCD1	Q04377	747 aa		4.78	□□□□□ -1.64
UBC13	YDR092W	YLR358C	O13565	187 aa		4.77	□□□□□ -1.65
UBC13	YDR092W	HSF1	P10961	833 aa		4.77	□□□□□ -1.65
UBC13	YDR092W	CDC48	P25694	835 aa	Known RBP	4.77	□□□□□ -1.65
UBC13	YDR092W	HBS1	P32769	611 aa	Known RBP	4.77	□□□□□ -1.65
UBC13	YDR092W	ATG19	P35193	415 aa		4.77	□□□□□ -1.65
UBC13	YDR092W	YRO2	P38079	344 aa		4.77	□□□□□ -1.65
UBC13	YDR092W	MND2	P40577	368 aa		4.77	□□□□□ -1.65
UBC13	YDR092W	HUL4	P40985	892 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 159.7 ms