RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W RPS26AP39938 119 aaKnown RBP3.57□□□□□ -1.84
VPS41YDR080W RPS26BP39939 119 aaKnown RBP3.57□□□□□ -1.84
VPS41YDR080W MSB1P21339 1137 aaKnown RBP3.57□□□□□ -1.84
VPS41YDR080W PPH3P32345 308 aa3.57□□□□□ -1.84
VPS41YDR080W SMY2P32909 740 aaKnown RBP3.57□□□□□ -1.84
VPS41YDR080W XKS1P42826 600 aa3.57□□□□□ -1.84
VPS41YDR080W HDA2Q06629 674 aa3.57□□□□□ -1.84
VPS41YDR080W BUG1Q12191 341 aa3.57□□□□□ -1.84
VPS41YDR080W YRF1-4O13559 1382 aa3.56□□□□□ -1.84
VPS41YDR080W RAD2P07276 1031 aa3.56□□□□□ -1.84
VPS41YDR080W PRE9P23638 258 aaKnown RBP3.56□□□□□ -1.84
VPS41YDR080W LRG1P35688 1017 aa3.56□□□□□ -1.84
VPS41YDR080W MTR4P47047 1073 aaKnown RBP3.56□□□□□ -1.84
VPS41YDR080W SAM35P14693 329 aa3.56□□□□□ -1.84
VPS41YDR080W RAD4P14736 754 aa3.55□□□□□ -1.84
VPS41YDR080W MAC1P35192 417 aa3.55□□□□□ -1.84
VPS41YDR080W YKL077WP36081 392 aa3.55□□□□□ -1.84
VPS41YDR080W ENP1P38333 483 aaKnown RBP3.55□□□□□ -1.84
VPS41YDR080W CIT3P43635 486 aa3.55□□□□□ -1.84
VPS41YDR080W TAF8Q03750 510 aa3.55□□□□□ -1.84
VPS41YDR080W UTP10P42945 1769 aaKnown RBP3.55□□□□□ -1.84
VPS41YDR080W NFS1P25374 497 aa3.55□□□□□ -1.84
VPS41YDR080W RSM26P47141 266 aa3.55□□□□□ -1.84
VPS41YDR080W RCL1Q08096 367 aaPredicted RBP3.55□□□□□ -1.84
VPS41YDR080W YLL054CQ12244 843 aa3.55□□□□□ -1.84
VPS41YDR080W LPX1Q12405 387 aaKnown RBP3.55□□□□□ -1.84
VPS41YDR080W YKL222CP35995 705 aa3.54□□□□□ -1.84
VPS41YDR080W YAR028WP39548 234 aa3.54□□□□□ -1.84
VPS41YDR080W SCT1P32784 759 aa3.54□□□□□ -1.84
VPS41YDR080W SEC8P32855 1065 aa3.54□□□□□ -1.84
VPS41YDR080W RSA3Q05942 220 aaKnown RBP3.54□□□□□ -1.84
VPS41YDR080W PUS7Q08647 676 aaKnown RBP3.54□□□□□ -1.84
VPS41YDR080W OXR1Q08952 273 aa3.54□□□□□ -1.84
VPS41YDR080W GCR1P07261 785 aa3.54□□□□□ -1.84
VPS41YDR080W RET1P22276 1149 aaKnown RBP3.54□□□□□ -1.84
VPS41YDR080W DUT1P33317 147 aa3.54□□□□□ -1.84
VPS41YDR080W ERT1P38140 529 aa3.54□□□□□ -1.84
VPS41YDR080W NOP7P53261 605 aaKnown RBP3.54□□□□□ -1.84
VPS41YDR080W FIG2P25653 1609 aa3.53□□□□□ -1.84
VPS41YDR080W SCP160P06105 1222 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
VPS41YDR080W KAR2P16474 682 aaKnown RBP3.53□□□□□ -1.84
VPS41YDR080W TSA1P34760 196 aaKnown RBP3.53□□□□□ -1.84
VPS41YDR080W HEM3P28789 327 aa3.53□□□□□ -1.84
VPS41YDR080W NNK1P36003 928 aa3.53□□□□□ -1.84
VPS41YDR080W ADD66P36040 267 aa3.53□□□□□ -1.84
VPS41YDR080W EAF6P47128 113 aa3.53□□□□□ -1.84
VPS41YDR080W YNR063WP53749 607 aa3.53□□□□□ -1.84
VPS41YDR080W RAT1Q02792 1006 aaKnown RBP3.53□□□□□ -1.84
VPS41YDR080W LIP5P32875 414 aa3.52□□□□□ -1.85
VPS41YDR080W SHU2P38957 223 aa3.52□□□□□ -1.85
VPS41YDR080W CHZ1P40019 153 aaPredicted RBP3.52□□□□□ -1.85
VPS41YDR080W ORC3P54790 616 aa3.52□□□□□ -1.85
VPS41YDR080W YLR257WQ06146 321 aaKnown RBP3.52□□□□□ -1.85
VPS41YDR080W GRX1P25373 110 aaKnown RBP3.52□□□□□ -1.85
VPS41YDR080W YJL045WP47052 634 aa3.52□□□□□ -1.85
VPS41YDR080W ROD1Q02805 837 aa3.52□□□□□ -1.85
VPS41YDR080W SSY1Q03770 852 aa3.52□□□□□ -1.85
VPS41YDR080W AVO1Q08236 1176 aa3.52□□□□□ -1.85
VPS41YDR080W TRE1Q08919 783 aa3.52□□□□□ -1.85
VPS41YDR080W LEU2P04173 364 aaPredicted RBP3.51□□□□□ -1.85
VPS41YDR080W MKK2P32491 506 aa3.51□□□□□ -1.85
VPS41YDR080W SQT1P35184 431 aa3.51□□□□□ -1.85
VPS41YDR080W QNS1P38795 714 aaKnown RBP3.51□□□□□ -1.85
VPS41YDR080W RRT14P40470 206 aa3.51□□□□□ -1.85
VPS41YDR080W YFL054CP43549 646 aa3.51□□□□□ -1.85
VPS41YDR080W RKM2Q03942 479 aa3.51□□□□□ -1.85
VPS41YDR080W SEG2P34250 1132 aa3.51□□□□□ -1.85
VPS41YDR080W SLD2P34252 453 aa3.51□□□□□ -1.85
VPS41YDR080W DUS1P53759 423 aaKnown RBP3.51□□□□□ -1.85
VPS41YDR080W MCD1Q12158 566 aa3.51□□□□□ -1.85
VPS41YDR080W YDL177CQ12257 170 aa3.51□□□□□ -1.85
VPS41YDR080W HSP78P33416 811 aa3.51□□□□□ -1.85
VPS41YDR080W TPP1Q03796 238 aa3.51□□□□□ -1.85
VPS41YDR080W EST2Q06163 884 aa3.51□□□□□ -1.85
VPS41YDR080W YOR059CQ08448 450 aaKnown RBP3.51□□□□□ -1.85
VPS41YDR080W SIW14P53965 281 aa3.5□□□□□ -1.85
VPS41YDR080W KIN4Q01919 800 aa3.5□□□□□ -1.85
VPS41YDR080W RPO41P13433 1351 aaKnown RBP3.5□□□□□ -1.85
VPS41YDR080W ALG3P38179 458 aa3.5□□□□□ -1.85
VPS41YDR080W MRPS18P42847 217 aa3.5□□□□□ -1.85
VPS41YDR080W AVT1P47082 602 aa3.5□□□□□ -1.85
VPS41YDR080W BAP2P38084 609 aa3.49□□□□□ -1.85
VPS41YDR080W NYV1Q12255 253 aa3.49□□□□□ -1.85
VPS41YDR080W DED1P06634 604 aaKnown RBP3.49□□□□□ -1.85
VPS41YDR080W RNQ1P25367 405 aa3.49□□□□□ -1.85
VPS41YDR080W KIP1P28742 1111 aa3.49□□□□□ -1.85
VPS41YDR080W ABZ1P37254 787 aaPredicted RBP3.49□□□□□ -1.85
VPS41YDR080W ETP1P38748 585 aaKnown RBP3.49□□□□□ -1.85
VPS41YDR080W OYE2Q03558 400 aaKnown RBP3.49□□□□□ -1.85
VPS41YDR080W DFG16Q99234 619 aa3.49□□□□□ -1.85
VPS41YDR080W ELM1P32801 640 aa3.48□□□□□ -1.85
VPS41YDR080W MGE1P38523 228 aa3.48□□□□□ -1.85
VPS41YDR080W GPB2P39717 880 aa3.48□□□□□ -1.85
VPS41YDR080W SNF5P18480 905 aa3.48□□□□□ -1.85
VPS41YDR080W PRO1P32264 428 aa3.48□□□□□ -1.85
VPS41YDR080W PTC7P38797 343 aa3.48□□□□□ -1.85
VPS41YDR080W SQS1P53866 767 aaKnown RBP3.48□□□□□ -1.85
VPS41YDR080W EEB1Q02891 456 aa3.48□□□□□ -1.85
VPS41YDR080W CDA2Q06703 312 aa3.48□□□□□ -1.85
VPS41YDR080W YSC84P32793 468 aa3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms