RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W ISM1P48526 1002 aa6.36□□□□□ -1.39
VMS1YDR049W TAF11Q04226 346 aa6.36□□□□□ -1.39
VMS1YDR049W TDA9Q04545 1251 aa6.36□□□□□ -1.39
VMS1YDR049W EIS1Q05050 843 aaKnown RBP6.36□□□□□ -1.39
VMS1YDR049W RPC40P07703 335 aaKnown RBP6.36□□□□□ -1.39
VMS1YDR049W MSS18P08593 268 aa6.36□□□□□ -1.39
VMS1YDR049W RPP1BP10622 106 aaKnown RBP6.36□□□□□ -1.39
VMS1YDR049W VBA5P36172 582 aa6.36□□□□□ -1.39
VMS1YDR049W UBS1P38290 277 aa6.36□□□□□ -1.39
VMS1YDR049W BFR1P38934 470 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
VMS1YDR049W EMW1P42842 904 aaKnown RBP6.36□□□□□ -1.39
VMS1YDR049W NIT2P47016 307 aa6.36□□□□□ -1.39
VMS1YDR049W SUT1P53032 299 aaKnown RBP6.36□□□□□ -1.39
VMS1YDR049W SHE10P53075 577 aa6.36□□□□□ -1.39
VMS1YDR049W RBG2P53295 368 aaKnown RBP6.36□□□□□ -1.39
VMS1YDR049W CAF120P53836 1060 aa6.36□□□□□ -1.39
VMS1YDR049W TBF1Q02457 562 aa6.36□□□□□ -1.39
VMS1YDR049W CAB1Q04430 367 aa6.36□□□□□ -1.39
VMS1YDR049W YMR111CQ04461 462 aaPredicted RBP6.36□□□□□ -1.39
VMS1YDR049W YDL124WQ07551 312 aaKnown RBP6.36□□□□□ -1.39
VMS1YDR049W BRE4Q07660 1125 aa6.36□□□□□ -1.39
VMS1YDR049W TMA46Q12000 345 aaKnown RBP6.36□□□□□ -1.39
VMS1YDR049W RRP36Q12481 300 aaPredicted RBP6.36□□□□□ -1.39
VMS1YDR049W VMA2P16140 517 aaKnown RBP6.35□□□□□ -1.39
VMS1YDR049W PHO81P17442 1178 aa6.35□□□□□ -1.39
VMS1YDR049W PRP5P21372 849 aaPredicted RBP6.35□□□□□ -1.39
VMS1YDR049W PRP40P33203 583 aaKnown RBP6.35□□□□□ -1.39
VMS1YDR049W SPC29P33419 253 aa6.35□□□□□ -1.39
VMS1YDR049W PIM1P36775 1133 aa6.35□□□□□ -1.39
VMS1YDR049W DSS1P39112 969 aa6.35□□□□□ -1.39
VMS1YDR049W GCD10P41814 478 aa6.35□□□□□ -1.39
VMS1YDR049W UPF3P48412 387 aaKnown RBP6.35□□□□□ -1.39
VMS1YDR049W YKU80Q04437 629 aa6.35□□□□□ -1.39
VMS1YDR049W YML082WQ04533 649 aaKnown RBP6.35□□□□□ -1.39
VMS1YDR049W SMF3Q12078 473 aaPredicted RBP6.35□□□□□ -1.39
VMS1YDR049W REC107P21651 314 aa6.34□□□□□ -1.39
VMS1YDR049W RET1P22276 1149 aaKnown RBP6.34□□□□□ -1.39
VMS1YDR049W DAL80P26343 269 aa6.34□□□□□ -1.39
VMS1YDR049W ORC2P32833 620 aa6.34□□□□□ -1.39
VMS1YDR049W NTH2P35172 780 aa6.34□□□□□ -1.39
VMS1YDR049W PBY1P38254 753 aa6.34□□□□□ -1.39
VMS1YDR049W MEF2P39677 819 aa6.34□□□□□ -1.39
VMS1YDR049W FIG4P42837 879 aa6.34□□□□□ -1.39
VMS1YDR049W YPL109CQ02981 657 aa6.34□□□□□ -1.39
VMS1YDR049W TUM1Q08686 304 aaKnown RBP6.34□□□□□ -1.39
VMS1YDR049W MRN1Q08925 612 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39not detected
VMS1YDR049W PET123P17558 318 aa6.34□□□□□ -1.39
VMS1YDR049W TRX1P22217 103 aaKnown RBP6.34□□□□□ -1.39
VMS1YDR049W PUF4P25339 888 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39not detected
VMS1YDR049W SRO9P25567 434 aaKnown RBP6.34□□□□□ -1.39
VMS1YDR049W SBA1P28707 216 aaKnown RBP6.34□□□□□ -1.39
VMS1YDR049W ILV3P39522 585 aaKnown RBP6.34□□□□□ -1.39
VMS1YDR049W RTT105P40063 208 aa6.34□□□□□ -1.39
VMS1YDR049W SET2P46995 733 aaKnown RBP6.34□□□□□ -1.39
VMS1YDR049W RNR4P49723 345 aaKnown RBP6.34□□□□□ -1.39
VMS1YDR049W MRPL19P53875 158 aa6.34□□□□□ -1.39
VMS1YDR049W ALF1P53904 254 aa6.34□□□□□ -1.39
VMS1YDR049W ARA2Q04212 335 aa6.34□□□□□ -1.39
VMS1YDR049W INP54Q08227 384 aaKnown RBP6.34□□□□□ -1.39
VMS1YDR049W GYP1Q08484 637 aa6.34□□□□□ -1.39
VMS1YDR049W ENT1Q12518 454 aa6.34□□□□□ -1.39
VMS1YDR049W HNM1P19807 563 aa6.33□□□□□ -1.4
VMS1YDR049W ABD1P32783 436 aaPredicted RBP6.33□□□□□ -1.4
VMS1YDR049W CNS1P33313 385 aa6.33□□□□□ -1.4
VMS1YDR049W SEA4P38164 1038 aa6.33□□□□□ -1.4
VMS1YDR049W PIC2P40035 300 aa6.33□□□□□ -1.4
VMS1YDR049W PCL7P40186 285 aa6.33□□□□□ -1.4
VMS1YDR049W ALR2P43553 858 aa6.33□□□□□ -1.4
VMS1YDR049W YAP1802P53309 568 aa6.33□□□□□ -1.4
VMS1YDR049W CWC21Q03375 135 aaKnown RBP6.33□□□□□ -1.4
VMS1YDR049W YCS4Q06156 1176 aa6.33□□□□□ -1.4
VMS1YDR049W AOS1Q06624 347 aa6.33□□□□□ -1.4
VMS1YDR049W TAH18Q12181 623 aa6.33□□□□□ -1.4
VMS1YDR049W RPC53P25441 422 aa6.32□□□□□ -1.4
VMS1YDR049W CDC48P25694 835 aaKnown RBP6.32□□□□□ -1.4
VMS1YDR049W CMK1P27466 446 aaKnown RBP6.32□□□□□ -1.4
VMS1YDR049W MCM5P29496 775 aaKnown RBP6.32□□□□□ -1.4
VMS1YDR049W SWC3P31376 625 aa6.32□□□□□ -1.4
VMS1YDR049W DAL1P32375 460 aa6.32□□□□□ -1.4
VMS1YDR049W PSY4P38193 441 aa6.32□□□□□ -1.4
VMS1YDR049W NOP16P40007 231 aaKnown RBP6.32□□□□□ -1.4
VMS1YDR049W AXL1P40851 1208 aa6.32□□□□□ -1.4
VMS1YDR049W IRC6P43615 237 aa6.32□□□□□ -1.4
VMS1YDR049W KRE33P53914 1056 aaKnown RBP6.32□□□□□ -1.4
VMS1YDR049W APP1P53933 587 aa6.32□□□□□ -1.4
VMS1YDR049W SYF1Q04048 859 aaPredicted RBP6.32□□□□□ -1.4
VMS1YDR049W SPP382Q06411 708 aaPredicted RBP6.32□□□□□ -1.4
VMS1YDR049W ARV1Q06541 321 aa6.32□□□□□ -1.4
VMS1YDR049W MPC54Q08550 464 aa6.32□□□□□ -1.4
VMS1YDR049W SGS1P35187 1447 aa6.32□□□□□ -1.4
VMS1YDR049W RIB7P33312 244 aa6.32□□□□□ -1.4
VMS1YDR049W TIF4631P39935 952 aaKnown RBP6.32□□□□□ -1.4
VMS1YDR049W TPA1P40032 644 aaKnown RBP6.32□□□□□ -1.4
VMS1YDR049W QRI7P43122 407 aa6.32□□□□□ -1.4
VMS1YDR049W RAT1Q02792 1006 aaKnown RBP6.32□□□□□ -1.4
VMS1YDR049W GSF2Q04697 403 aaKnown RBP6.32□□□□□ -1.4
VMS1YDR049W CIA1Q05583 330 aa6.32□□□□□ -1.4
VMS1YDR049W RGA2Q06407 1009 aa6.32□□□□□ -1.4
VMS1YDR049W REX3Q12090 404 aa6.32□□□□□ -1.4
VMS1YDR049W YDL206WQ12424 762 aa6.32□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms