RNA–Protein interactions for RNA: YDL126C

CDC48, Transcript of AAA ATPase, yeastyeast

Gene CDC48, Length 2,508 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC48YDL126C MFT1P33441 392 aaKnown RBP5.16□□□□□ -1.58
CDC48YDL126C YHL008CP38750 627 aa5.16□□□□□ -1.58
CDC48YDL126C YGL140CP53120 1219 aa5.16□□□□□ -1.58
CDC48YDL126C GPG1P53130 126 aa5.16□□□□□ -1.58
CDC48YDL126C IRC3Q06683 689 aa5.16□□□□□ -1.58
CDC48YDL126C GYP1Q08484 637 aa5.16□□□□□ -1.58
CDC48YDL126C CAN1P04817 590 aa5.15□□□□□ -1.58
CDC48YDL126C RPL8BP29453 256 aaKnown RBP5.15□□□□□ -1.58
CDC48YDL126C RPN12P32496 274 aa5.15□□□□□ -1.58
CDC48YDL126C ECM32P32644 1121 aaKnown RBP5.15□□□□□ -1.58
CDC48YDL126C OPY1P38271 328 aa5.15□□□□□ -1.58
CDC48YDL126C AMN1P38285 549 aaPredicted RBP5.15□□□□□ -1.58
CDC48YDL126C RSF2P46974 1380 aa5.15□□□□□ -1.58
CDC48YDL126C HED1Q03937 162 aa5.15□□□□□ -1.58
CDC48YDL126C PDC6P26263 563 aaKnown RBP5.15□□□□□ -1.59
CDC48YDL126C GRX7P38068 203 aa5.15□□□□□ -1.59
CDC48YDL126C YBR184WP38299 523 aa5.15□□□□□ -1.59
CDC48YDL126C BUD27P43573 796 aaKnown RBP RIP-Chip data5.15□□□□□ -1.59not detected
CDC48YDL126C YJR115WP47152 169 aa5.15□□□□□ -1.59
CDC48YDL126C YNR040WP53736 256 aa5.15□□□□□ -1.59
CDC48YDL126C KRE33P53914 1056 aaKnown RBP5.15□□□□□ -1.59
CDC48YDL126C YNL050CP53952 270 aa5.15□□□□□ -1.59
CDC48YDL126C TDA5Q06417 326 aaKnown RBP5.15□□□□□ -1.59
CDC48YDL126C TCB1Q12466 1186 aa5.15□□□□□ -1.59
CDC48YDL126C CIT1P00890 479 aa5.14□□□□□ -1.59
CDC48YDL126C MET6P05694 767 aaKnown RBP5.14□□□□□ -1.59
CDC48YDL126C DAL1P32375 460 aa5.14□□□□□ -1.59
CDC48YDL126C XKS1P42826 600 aa5.14□□□□□ -1.59
CDC48YDL126C CUS1Q02554 436 aaPredicted RBP5.14□□□□□ -1.59
CDC48YDL126C NAN1Q02931 896 aaKnown RBP5.14□□□□□ -1.59
CDC48YDL126C MTC5Q03897 1148 aa5.14□□□□□ -1.59
CDC48YDL126C RPL8AP17076 256 aaKnown RBP5.14□□□□□ -1.59
CDC48YDL126C MRC1P25588 1096 aa5.14□□□□□ -1.59
CDC48YDL126C IRE1P32361 1115 aa5.14□□□□□ -1.59
CDC48YDL126C RER2P35196 286 aa5.14□□□□□ -1.59
CDC48YDL126C BET3P36149 193 aa5.14□□□□□ -1.59
CDC48YDL126C VTC4P47075 721 aa5.14□□□□□ -1.59
CDC48YDL126C RTA1P53047 317 aa5.14□□□□□ -1.59
CDC48YDL126C MON1P53129 644 aa5.14□□□□□ -1.59
CDC48YDL126C CTF4Q01454 927 aa5.14□□□□□ -1.59
CDC48YDL126C SHE9Q04172 456 aa5.14□□□□□ -1.59
CDC48YDL126C YPL066WQ12194 479 aa5.14□□□□□ -1.59
CDC48YDL126C FOB1O13329 566 aa5.13□□□□□ -1.59
CDC48YDL126C HSC82P15108 705 aaKnown RBP5.13□□□□□ -1.59
CDC48YDL126C AGP1P25376 633 aa5.13□□□□□ -1.59
CDC48YDL126C HSP104P31539 908 aaKnown RBP5.13□□□□□ -1.59
CDC48YDL126C MUM2P38236 366 aa5.13□□□□□ -1.59
CDC48YDL126C RVS167P39743 482 aaKnown RBP5.13□□□□□ -1.59
CDC48YDL126C MAM1P40065 302 aa5.13□□□□□ -1.59
CDC48YDL126C YIL092WP40497 633 aa5.13□□□□□ -1.59
CDC48YDL126C GPP1P41277 250 aaKnown RBP5.13□□□□□ -1.59
CDC48YDL126C MDM1Q01846 1127 aa5.13□□□□□ -1.59
CDC48YDL126C AOS1Q06624 347 aa5.13□□□□□ -1.59
CDC48YDL126C FMP25Q08023 583 aa5.13□□□□□ -1.59
CDC48YDL126C TRP2P00899 507 aaKnown RBP5.13□□□□□ -1.59
CDC48YDL126C PHO8P11491 566 aa5.13□□□□□ -1.59
CDC48YDL126C SWI3P32591 825 aa5.13□□□□□ -1.59
CDC48YDL126C YKL222CP35995 705 aa5.13□□□□□ -1.59
CDC48YDL126C GYP7P48365 746 aa5.13□□□□□ -1.59
CDC48YDL126C ATG16Q03818 150 aa5.13□□□□□ -1.59
CDC48YDL126C SLX4Q12098 748 aa5.13□□□□□ -1.59
CDC48YDL126C YRF1-3P0CX14 1859 aa5.12□□□□□ -1.59
CDC48YDL126C YRF1-7P0CX15 1859 aa5.12□□□□□ -1.59
CDC48YDL126C YRF1-6P53819 1859 aa5.12□□□□□ -1.59
CDC48YDL126C CRP1P38845 465 aaKnown RBP5.12□□□□□ -1.59
CDC48YDL126C YVC1Q12324 675 aa5.12□□□□□ -1.59
CDC48YDL126C NPR1P22211 790 aa5.12□□□□□ -1.59
CDC48YDL126C TIM54P47045 478 aa5.12□□□□□ -1.59
CDC48YDL126C CWC24P53769 259 aa5.12□□□□□ -1.59
CDC48YDL126C YNL058CP53947 316 aa5.12□□□□□ -1.59
CDC48YDL126C YOL087CQ99247 1116 aa5.12□□□□□ -1.59
CDC48YDL126C NOT3P06102 836 aaKnown RBP5.11□□□□□ -1.59
CDC48YDL126C TPM1P17536 199 aaKnown RBP5.11□□□□□ -1.59
CDC48YDL126C VBA5P36172 582 aa5.11□□□□□ -1.59
CDC48YDL126C YMR124WP39523 943 aaKnown RBP5.11□□□□□ -1.59
CDC48YDL126C RRT14P40470 206 aa5.11□□□□□ -1.59
CDC48YDL126C SND1Q04007 877 aa5.11□□□□□ -1.59
CDC48YDL126C SPO20Q04359 397 aa5.11□□□□□ -1.59
CDC48YDL126C TMA17Q12513 150 aa5.11□□□□□ -1.59
CDC48YDL126C ENT1Q12518 454 aa5.11□□□□□ -1.59
CDC48YDL126C NOP14Q99207 810 aaKnown RBP5.11□□□□□ -1.59
CDC48YDL126C LYS2P07702 1392 aa5.11□□□□□ -1.59
CDC48YDL126C MKK2P32491 506 aa5.11□□□□□ -1.59
CDC48YDL126C EXO84P38261 753 aa5.11□□□□□ -1.59
CDC48YDL126C EXO5P38289 585 aa5.11□□□□□ -1.59
CDC48YDL126C AIM46P38885 310 aa5.11□□□□□ -1.59
CDC48YDL126C RRP8P38961 392 aaKnown RBP5.11□□□□□ -1.59
CDC48YDL126C AAD14P42884 376 aa5.11□□□□□ -1.59
CDC48YDL126C TAF1P46677 1066 aa5.11□□□□□ -1.59
CDC48YDL126C YNL034WP53963 612 aa5.11□□□□□ -1.59
CDC48YDL126C SIW14P53965 281 aa5.11□□□□□ -1.59
CDC48YDL126C YNL018CP53976 612 aa5.11□□□□□ -1.59
CDC48YDL126C NUP145P49687 1317 aa5.1□□□□□ -1.59
CDC48YDL126C APA1P16550 321 aaKnown RBP5.1□□□□□ -1.59
CDC48YDL126C UGA3P26370 528 aa5.1□□□□□ -1.59
CDC48YDL126C TFA2P36145 328 aa5.1□□□□□ -1.59
CDC48YDL126C COG6P53959 839 aa5.1□□□□□ -1.59
CDC48YDL126C KCC4P25389 1037 aa5.09□□□□□ -1.59
CDC48YDL126C MSH2P25847 964 aa5.09□□□□□ -1.59
CDC48YDL126C ABD1P32783 436 aaPredicted RBP5.09□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms