RNA–Protein interactions for RNA: YDL108W

KIN28, Transcript of Serine/threonine protein kinase, subunit of transcription factor TFIIH, yeastyeast

Gene KIN28, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KIN28YDL108W RPN3P40016 523 aaKnown RBP5.64□□□□□ -1.51
KIN28YDL108W TMA64Q04600 565 aaKnown RBP5.64□□□□□ -1.51
KIN28YDL108W NSI1Q12457 570 aa5.64□□□□□ -1.51
KIN28YDL108W DEF1P35732 738 aaKnown RBP5.63□□□□□ -1.51
KIN28YDL108W KAE1P36132 386 aa5.63□□□□□ -1.51
KIN28YDL108W YHL012WP38709 493 aa5.63□□□□□ -1.51
KIN28YDL108W FPR3P38911 411 aaKnown RBP5.63□□□□□ -1.51
KIN28YDL108W IRC24P40580 263 aa5.63□□□□□ -1.51
KIN28YDL108W IES1P43579 692 aa5.63□□□□□ -1.51
KIN28YDL108W ERP6P53198 216 aa5.63□□□□□ -1.51
KIN28YDL108W TNA1P53322 534 aa5.63□□□□□ -1.51
KIN28YDL108W RCM1P53972 490 aa5.63□□□□□ -1.51
KIN28YDL108W HOS3Q02959 697 aaKnown RBP5.63□□□□□ -1.51
KIN28YDL108W YLR122CQ12312 125 aa5.63□□□□□ -1.51
KIN28YDL108W YVC1Q12324 675 aa5.63□□□□□ -1.51
KIN28YDL108W RPL11AP0C0W9 174 aaKnown RBP5.62□□□□□ -1.51
KIN28YDL108W MSB1P21339 1137 aaKnown RBP5.62□□□□□ -1.51
KIN28YDL108W MFT1P33441 392 aaKnown RBP5.62□□□□□ -1.51
KIN28YDL108W SIP5P40210 489 aaKnown RBP5.62□□□□□ -1.51
KIN28YDL108W YGR125WP53273 1036 aa5.62□□□□□ -1.51
KIN28YDL108W TLG1Q03322 224 aa5.62□□□□□ -1.51
KIN28YDL108W EAF1Q06337 982 aa5.62□□□□□ -1.51
KIN28YDL108W FMP25Q08023 583 aa5.62□□□□□ -1.51
KIN28YDL108W YOL057WQ08225 711 aa5.62□□□□□ -1.51
KIN28YDL108W RPL11BQ3E757 174 aaPredicted RBP5.62□□□□□ -1.51
KIN28YDL108W SSB1P11484 613 aaKnown RBP5.61□□□□□ -1.51
KIN28YDL108W HSP60P19882 572 aaKnown RBP5.61□□□□□ -1.51
KIN28YDL108W ARE1P25628 610 aa5.61□□□□□ -1.51
KIN28YDL108W CCZ1P38273 704 aa5.61□□□□□ -1.51
KIN28YDL108W SSB2P40150 613 aaKnown RBP5.61□□□□□ -1.51
KIN28YDL108W VPS27P40343 622 aaKnown RBP5.61□□□□□ -1.51
KIN28YDL108W RPN4Q03465 531 aa5.61□□□□□ -1.51
KIN28YDL108W FLC1Q08967 793 aa5.61□□□□□ -1.51
KIN28YDL108W KAR1P11927 433 aa5.6□□□□□ -1.51
KIN28YDL108W RPL8BP29453 256 aaKnown RBP5.6□□□□□ -1.51
KIN28YDL108W PBP2P38151 413 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
KIN28YDL108W PNT1P38969 423 aa5.6□□□□□ -1.51
KIN28YDL108W MXR1P40029 184 aa5.6□□□□□ -1.51
KIN28YDL108W NOP2P40991 618 aaKnown RBP5.6□□□□□ -1.51
KIN28YDL108W ALR2P43553 858 aa5.6□□□□□ -1.51
KIN28YDL108W PFD1P46988 109 aa5.6□□□□□ -1.51
KIN28YDL108W MEH1Q02205 184 aa5.6□□□□□ -1.51
KIN28YDL108W ENT2Q05785 613 aa5.6□□□□□ -1.51
KIN28YDL108W NBA1Q08229 501 aaKnown RBP5.6□□□□□ -1.51
KIN28YDL108W SRO9P25567 434 aaKnown RBP5.59□□□□□ -1.51
KIN28YDL108W MDL2P33311 773 aa5.59□□□□□ -1.51
KIN28YDL108W BLI1P35727 113 aa5.59□□□□□ -1.51
KIN28YDL108W YHR020WP38708 688 aaKnown RBP5.59□□□□□ -1.51
KIN28YDL108W OYE3P41816 400 aaPredicted RBP5.59□□□□□ -1.51
KIN28YDL108W YGL081WP53156 320 aa5.59□□□□□ -1.51
KIN28YDL108W YGR130CP53278 816 aa5.59□□□□□ -1.51
KIN28YDL108W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.59□□□□□ -1.51not detected
KIN28YDL108W YDR306CQ06640 478 aa5.59□□□□□ -1.51
KIN28YDL108W TRE1Q08919 783 aa5.59□□□□□ -1.51
KIN28YDL108W ACM1Q08981 209 aa5.59□□□□□ -1.51
KIN28YDL108W HOS4P40480 1083 aa5.58□□□□□ -1.52
KIN28YDL108W HUL4P40985 892 aa5.58□□□□□ -1.52
KIN28YDL108W DUS3Q06053 668 aaKnown RBP5.58□□□□□ -1.52
KIN28YDL108W RSB1Q08417 382 aa5.58□□□□□ -1.52
KIN28YDL108W PLP2Q12017 286 aa5.58□□□□□ -1.52
KIN28YDL108W CIT1P00890 479 aa5.57□□□□□ -1.52
KIN28YDL108W SAM35P14693 329 aa5.57□□□□□ -1.52
KIN28YDL108W SNF5P18480 905 aa5.57□□□□□ -1.52
KIN28YDL108W DBP2P24783 546 aaKnown RBP5.57□□□□□ -1.52
KIN28YDL108W PRO1P32264 428 aa5.57□□□□□ -1.52
KIN28YDL108W PPH3P32345 308 aa5.57□□□□□ -1.52
KIN28YDL108W AAR2P32357 355 aaPredicted RBP5.57□□□□□ -1.52
KIN28YDL108W UGA2P38067 497 aa5.57□□□□□ -1.52
KIN28YDL108W CCC2P38995 1004 aa5.57□□□□□ -1.52
KIN28YDL108W PIK1P39104 1066 aa5.57□□□□□ -1.52
KIN28YDL108W GEM1P39722 662 aa5.57□□□□□ -1.52
KIN28YDL108W YFL054CP43549 646 aa5.57□□□□□ -1.52
KIN28YDL108W UTP8P53276 713 aaKnown RBP5.57□□□□□ -1.52
KIN28YDL108W COG4Q06096 861 aa5.57□□□□□ -1.52
KIN28YDL108W CYC7P00045 113 aa5.56□□□□□ -1.52
KIN28YDL108W THS1P04801 734 aaKnown RBP5.56□□□□□ -1.52
KIN28YDL108W DAL5P15365 543 aa5.56□□□□□ -1.52
KIN28YDL108W SCT1P32784 759 aa5.56□□□□□ -1.52
KIN28YDL108W AIM26P32858 118 aa5.56□□□□□ -1.52
KIN28YDL108W GRX7P38068 203 aa5.56□□□□□ -1.52
KIN28YDL108W BAP2P38084 609 aa5.56□□□□□ -1.52
KIN28YDL108W PTC7P38797 343 aa5.56□□□□□ -1.52
KIN28YDL108W GGA2P38817 585 aaKnown RBP5.56□□□□□ -1.52
KIN28YDL108W RSP5P39940 809 aaKnown RBP5.56□□□□□ -1.52
KIN28YDL108W GTS1P40956 396 aa5.56□□□□□ -1.52
KIN28YDL108W GUS1P46655 708 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
KIN28YDL108W SRP1Q02821 542 aaKnown RBP5.56□□□□□ -1.52
KIN28YDL108W YDL124WQ07551 312 aaKnown RBP5.56□□□□□ -1.52
KIN28YDL108W RCL1Q08096 367 aaPredicted RBP5.56□□□□□ -1.52
KIN28YDL108W CIT2P08679 460 aa5.55□□□□□ -1.52
KIN28YDL108W OPI1P21957 404 aa5.55□□□□□ -1.52
KIN28YDL108W CDC11P32458 415 aa5.55□□□□□ -1.52
KIN28YDL108W SLA2P33338 968 aa5.55□□□□□ -1.52
KIN28YDL108W PEX7P39108 375 aa5.55□□□□□ -1.52
KIN28YDL108W CHZ1P40019 153 aaPredicted RBP5.55□□□□□ -1.52
KIN28YDL108W RSC58Q07979 502 aa5.55□□□□□ -1.52
KIN28YDL108W PSK2Q08217 1101 aa5.55□□□□□ -1.52
KIN28YDL108W ERP4Q12450 207 aa5.55□□□□□ -1.52
KIN28YDL108W GCD1P09032 578 aaPredicted RBP5.54□□□□□ -1.52
KIN28YDL108W SAH1P39954 449 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms