RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC1, Length 846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC1YDL006W HUL5P53119 910 aa6.22□□□□□ -1.41
PTC1YDL006W TPP1Q03796 238 aa6.22□□□□□ -1.41
PTC1YDL006W PUS1Q12211 544 aaKnown RBP6.22□□□□□ -1.41
PTC1YDL006W OSH2Q12451 1283 aa6.22□□□□□ -1.41
PTC1YDL006W RPA190P10964 1664 aaKnown RBP6.22□□□□□ -1.41
PTC1YDL006W SBP1P10080 294 aaKnown RBP6.21□□□□□ -1.42
PTC1YDL006W SAF1P38352 637 aa6.21□□□□□ -1.42
PTC1YDL006W MMM1P41800 426 aa6.21□□□□□ -1.42
PTC1YDL006W ERP6P53198 216 aa6.21□□□□□ -1.42
PTC1YDL006W FMP25Q08023 583 aa6.21□□□□□ -1.42
PTC1YDL006W YER152CP10356 443 aa6.2□□□□□ -1.42
PTC1YDL006W YHR020WP38708 688 aaKnown RBP6.2□□□□□ -1.42
PTC1YDL006W AKR1P39010 764 aa6.2□□□□□ -1.42
PTC1YDL006W SIP5P40210 489 aaKnown RBP6.2□□□□□ -1.42
PTC1YDL006W CIT3P43635 486 aa6.2□□□□□ -1.42
PTC1YDL006W PFD1P46988 109 aa6.2□□□□□ -1.42
PTC1YDL006W SPP382Q06411 708 aaPredicted RBP6.2□□□□□ -1.42
PTC1YDL006W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42not detected
PTC1YDL006W NUP159P40477 1460 aa6.2□□□□□ -1.42
PTC1YDL006W RPL8BP29453 256 aaKnown RBP6.19□□□□□ -1.42
PTC1YDL006W COQ2P32378 372 aa6.19□□□□□ -1.42
PTC1YDL006W YSC84P32793 468 aa6.19□□□□□ -1.42
PTC1YDL006W NMD2P38798 1089 aaKnown RBP6.19□□□□□ -1.42
PTC1YDL006W PNT1P38969 423 aa6.19□□□□□ -1.42
PTC1YDL006W BUD6P41697 788 aa6.19□□□□□ -1.42
PTC1YDL006W UTP8P53276 713 aaKnown RBP6.19□□□□□ -1.42
PTC1YDL006W TNA1P53322 534 aa6.19□□□□□ -1.42
PTC1YDL006W HOS3Q02959 697 aaKnown RBP6.19□□□□□ -1.42
PTC1YDL006W RGA2Q06407 1009 aa6.19□□□□□ -1.42
PTC1YDL006W SNT2P53127 1403 aa6.18□□□□□ -1.42
PTC1YDL006W COQ4O13525 335 aa6.18□□□□□ -1.42
PTC1YDL006W HSP60P19882 572 aaKnown RBP6.18□□□□□ -1.42
PTC1YDL006W BAP2P38084 609 aa6.18□□□□□ -1.42
PTC1YDL006W PBP2P38151 413 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42not detected
PTC1YDL006W GGA2P38817 585 aaKnown RBP6.18□□□□□ -1.42
PTC1YDL006W GPB2P39717 880 aa6.18□□□□□ -1.42
PTC1YDL006W CHZ1P40019 153 aaPredicted RBP6.18□□□□□ -1.42
PTC1YDL006W TPO2P53283 614 aa6.18□□□□□ -1.42
PTC1YDL006W YPL034WQ03083 165 aa6.18□□□□□ -1.42
PTC1YDL006W PPM2Q08282 695 aa6.18□□□□□ -1.42
PTC1YDL006W FLC1Q08967 793 aa6.18□□□□□ -1.42
PTC1YDL006W YVC1Q12324 675 aa6.18□□□□□ -1.42
PTC1YDL006W TY1B-JR2P47100 1755 aaKnown RBP6.17□□□□□ -1.42
PTC1YDL006W TY1B-ER2Q03619 1755 aa6.17□□□□□ -1.42
PTC1YDL006W TY1B-MR1Q04214 1755 aa6.17□□□□□ -1.42
PTC1YDL006W TY1B-MR2Q04670 1755 aaKnown RBP6.17□□□□□ -1.42
PTC1YDL006W TY1B-LR1Q12088 1755 aaKnown RBP6.17□□□□□ -1.42
PTC1YDL006W TY1B-NL1Q12112 1755 aa6.17□□□□□ -1.42
PTC1YDL006W TY1B-GR1Q12141 1755 aa6.17□□□□□ -1.42
PTC1YDL006W TY1B-BLQ12490 1755 aa6.17□□□□□ -1.42
PTC1YDL006W RPL11AP0C0W9 174 aaKnown RBP6.17□□□□□ -1.42
PTC1YDL006W MSB1P21339 1137 aaKnown RBP6.17□□□□□ -1.42
PTC1YDL006W SRO9P25567 434 aaKnown RBP6.17□□□□□ -1.42
PTC1YDL006W MBP1P39678 833 aa6.17□□□□□ -1.42
PTC1YDL006W EAR1Q03212 550 aa6.17□□□□□ -1.42
PTC1YDL006W RPL11BQ3E757 174 aaPredicted RBP6.17□□□□□ -1.42
PTC1YDL006W PDR15Q04182 1529 aaKnown RBP6.16□□□□□ -1.42
PTC1YDL006W CIT1P00890 479 aa6.16□□□□□ -1.42
PTC1YDL006W THS1P04801 734 aaKnown RBP6.16□□□□□ -1.42
PTC1YDL006W SNF5P18480 905 aa6.16□□□□□ -1.42
PTC1YDL006W GAL11P19659 1081 aa6.16□□□□□ -1.42
PTC1YDL006W NAM7P30771 971 aaKnown RBP6.16□□□□□ -1.42
PTC1YDL006W CCZ1P38273 704 aa6.16□□□□□ -1.42
PTC1YDL006W YHL012WP38709 493 aa6.16□□□□□ -1.42
PTC1YDL006W GEM1P39722 662 aa6.16□□□□□ -1.42
PTC1YDL006W GUS1P46655 708 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
PTC1YDL006W YGR125WP53273 1036 aa6.16□□□□□ -1.42
PTC1YDL006W EAF1Q06337 982 aa6.16□□□□□ -1.42
PTC1YDL006W ACM1Q08981 209 aa6.16□□□□□ -1.42
PTC1YDL006W MLP2P40457 1679 aa6.16□□□□□ -1.42
PTC1YDL006W NTE1Q04958 1679 aa6.16□□□□□ -1.42
PTC1YDL006W CIT2P08679 460 aa6.15□□□□□ -1.42
PTC1YDL006W CHS2P14180 963 aa6.15□□□□□ -1.42
PTC1YDL006W MDL2P33311 773 aa6.15□□□□□ -1.42
PTC1YDL006W WHI3P34761 661 aaKnown RBP6.15□□□□□ -1.42
PTC1YDL006W RRP14P36080 434 aaKnown RBP6.15□□□□□ -1.42
PTC1YDL006W PIK1P39104 1066 aa6.15□□□□□ -1.42
PTC1YDL006W YLR122CQ12312 125 aa6.15□□□□□ -1.42
PTC1YDL006W NSI1Q12457 570 aa6.15□□□□□ -1.42
PTC1YDL006W RPO21P04050 1733 aaKnown RBP6.14□□□□□ -1.43
PTC1YDL006W SAM35P14693 329 aa6.14□□□□□ -1.43
PTC1YDL006W NMD3P38861 518 aaKnown RBP6.14□□□□□ -1.43
PTC1YDL006W RSP5P39940 809 aaKnown RBP6.14□□□□□ -1.43
PTC1YDL006W RCM1P53972 490 aa6.14□□□□□ -1.43
PTC1YDL006W DOS2P54858 310 aa6.14□□□□□ -1.43
PTC1YDL006W MCA1Q08601 432 aa6.14□□□□□ -1.43
PTC1YDL006W GEA2P39993 1459 aaKnown RBP6.14□□□□□ -1.43
PTC1YDL006W ARE1P25628 610 aa6.13□□□□□ -1.43
PTC1YDL006W SLA2P33338 968 aa6.13□□□□□ -1.43
PTC1YDL006W KAE1P36132 386 aa6.13□□□□□ -1.43
PTC1YDL006W SIT1P39980 628 aa6.13□□□□□ -1.43
PTC1YDL006W HUL4P40985 892 aa6.13□□□□□ -1.43
PTC1YDL006W OYE3P41816 400 aaPredicted RBP6.13□□□□□ -1.43
PTC1YDL006W ALR2P43553 858 aa6.13□□□□□ -1.43
PTC1YDL006W NBA1Q08229 501 aaKnown RBP6.13□□□□□ -1.43
PTC1YDL006W YLL058WQ12198 575 aa6.13□□□□□ -1.43
PTC1YDL006W ULS1Q08562 1619 aa6.13□□□□□ -1.43
PTC1YDL006W LTE1P07866 1435 aa6.12□□□□□ -1.43
PTC1YDL006W DBP2P24783 546 aaKnown RBP6.12□□□□□ -1.43
PTC1YDL006W CDC11P32458 415 aa6.12□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 73.4 ms