RNA–Protein interactions for RNA: YCR005C

CIT2, Transcript of Citrate synthase, yeastyeast

Gene CIT2, Length 1,383 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT2YCR005C CEX1Q12453 761 aa8.1□□□□□ -1.11
CIT2YCR005C NBL1Q3E7Y6 73 aa8.1□□□□□ -1.11
CIT2YCR005C TUS1Q06412 1307 aa8.09□□□□□ -1.11
CIT2YCR005C MET6P05694 767 aaKnown RBP8.09□□□□□ -1.12
CIT2YCR005C DAT1P13483 248 aaKnown RBP8.09□□□□□ -1.12
CIT2YCR005C PWP2P25635 923 aaKnown RBP8.09□□□□□ -1.12
CIT2YCR005C ASF1P32447 279 aa8.09□□□□□ -1.12
CIT2YCR005C SAS3P34218 831 aa8.09□□□□□ -1.12
CIT2YCR005C PNT1P38969 423 aa8.09□□□□□ -1.12
CIT2YCR005C TIF4631P39935 952 aaKnown RBP8.09□□□□□ -1.12
CIT2YCR005C AIR1P40507 360 aaKnown RBP8.09□□□□□ -1.12
CIT2YCR005C HDA3Q06623 655 aa8.09□□□□□ -1.12
CIT2YCR005C CBC2Q08920 208 aaKnown RBP RIP-Chip data8.09□□□□□ -1.12not detected
CIT2YCR005C PGI1P12709 554 aaKnown RBP8.08□□□□□ -1.12
CIT2YCR005C KRS1P15180 591 aaKnown RBP8.08□□□□□ -1.12
CIT2YCR005C MIP1P15801 1254 aa8.08□□□□□ -1.12
CIT2YCR005C RPL8AP17076 256 aaKnown RBP8.08□□□□□ -1.12
CIT2YCR005C PUP1P25043 261 aa8.08□□□□□ -1.12
CIT2YCR005C EBP2P36049 427 aaKnown RBP8.08□□□□□ -1.12
CIT2YCR005C VAB2P40003 282 aa8.08□□□□□ -1.12
CIT2YCR005C PCI8P40512 444 aa8.08□□□□□ -1.12
CIT2YCR005C DFG5Q05031 458 aa8.08□□□□□ -1.12
CIT2YCR005C VIP1Q06685 1146 aaKnown RBP8.08□□□□□ -1.12
CIT2YCR005C PEX19Q07418 342 aa8.08□□□□□ -1.12
CIT2YCR005C DSE3Q08729 430 aa8.08□□□□□ -1.12
CIT2YCR005C MCD4P36051 919 aa8.07□□□□□ -1.12
CIT2YCR005C MAL33P38157 468 aa8.07□□□□□ -1.12
CIT2YCR005C BSD2P38356 321 aa8.07□□□□□ -1.12
CIT2YCR005C FAR11P53917 953 aa8.07□□□□□ -1.12
CIT2YCR005C YML037CQ03703 340 aa8.07□□□□□ -1.12
CIT2YCR005C RGP1P16664 663 aa8.06□□□□□ -1.12
CIT2YCR005C SRP54P20424 541 aaKnown RBP8.06□□□□□ -1.12
CIT2YCR005C RDS1P25611 832 aa8.06□□□□□ -1.12
CIT2YCR005C MSP1P28737 362 aa8.06□□□□□ -1.12
CIT2YCR005C CCT3P39077 534 aaKnown RBP8.06□□□□□ -1.12
CIT2YCR005C RSM25P40496 264 aa8.06□□□□□ -1.12
CIT2YCR005C HYR1P40581 163 aaKnown RBP8.06□□□□□ -1.12
CIT2YCR005C GIS4Q04233 774 aa8.06□□□□□ -1.12
CIT2YCR005C SMD2Q06217 110 aaKnown RBP8.06□□□□□ -1.12
CIT2YCR005C UTP4Q06679 776 aaKnown RBP8.06□□□□□ -1.12
CIT2YCR005C ETT1Q08421 412 aaKnown RBP8.06□□□□□ -1.12
CIT2YCR005C GET3Q12154 354 aaKnown RBP8.06□□□□□ -1.12
CIT2YCR005C HXK1P04806 485 aaKnown RBP8.05□□□□□ -1.12
CIT2YCR005C STI1P15705 589 aaKnown RBP RIP-Chip data8.05□□□□□ -1.12not detected
CIT2YCR005C PER1P25625 357 aa8.05□□□□□ -1.12
CIT2YCR005C BNI5P53890 448 aaKnown RBP8.05□□□□□ -1.12
CIT2YCR005C CSM3Q04659 317 aa8.05□□□□□ -1.12
CIT2YCR005C TIP41Q12199 356 aa8.05□□□□□ -1.12
CIT2YCR005C CDC6P09119 513 aa8.04□□□□□ -1.12
CIT2YCR005C FBP1P09201 348 aa8.04□□□□□ -1.12
CIT2YCR005C YKR018CP36114 725 aa8.04□□□□□ -1.12
CIT2YCR005C SNF7P39929 240 aaKnown RBP8.04□□□□□ -1.12
CIT2YCR005C YGL138CP53122 345 aa8.04□□□□□ -1.12
CIT2YCR005C RTC4P53850 401 aa8.04□□□□□ -1.12
CIT2YCR005C THR4P16120 514 aaKnown RBP8.03□□□□□ -1.12
CIT2YCR005C VAN1P23642 535 aa8.03□□□□□ -1.12
CIT2YCR005C UBX7P38349 436 aa8.03□□□□□ -1.12
CIT2YCR005C CCT5P40413 562 aaKnown RBP8.03□□□□□ -1.12
CIT2YCR005C NET1P47035 1189 aa8.03□□□□□ -1.12
CIT2YCR005C ASE1P50275 885 aa8.03□□□□□ -1.12
CIT2YCR005C ACS2P52910 683 aaKnown RBP8.03□□□□□ -1.12
CIT2YCR005C SUE1Q06524 206 aa8.03□□□□□ -1.12
CIT2YCR005C NOB1Q08444 459 aaKnown RBP8.03□□□□□ -1.12
CIT2YCR005C SES1P07284 462 aaKnown RBP8.02□□□□□ -1.13
CIT2YCR005C RAD18P10862 487 aa8.02□□□□□ -1.13
CIT2YCR005C VPS1P21576 704 aaKnown RBP8.02□□□□□ -1.13
CIT2YCR005C ROX1P25042 368 aa8.02□□□□□ -1.13
CIT2YCR005C ARL1P38116 183 aaKnown RBP8.02□□□□□ -1.13
CIT2YCR005C PHO88P38264 188 aaPredicted RBP8.02□□□□□ -1.13
CIT2YCR005C DSE4P53753 1117 aa8.02□□□□□ -1.13
CIT2YCR005C YAF9P53930 226 aa8.02□□□□□ -1.13
CIT2YCR005C RBA50Q04418 439 aa8.02□□□□□ -1.13
CIT2YCR005C EIS1Q05050 843 aaKnown RBP8.02□□□□□ -1.13
CIT2YCR005C YOR296WQ08748 1289 aa8.02□□□□□ -1.13
CIT2YCR005C DCS2Q12123 353 aa8.02□□□□□ -1.13
CIT2YCR005C TRS33Q99394 268 aa8.02□□□□□ -1.13
CIT2YCR005C VMA2P16140 517 aaKnown RBP8.01□□□□□ -1.13
CIT2YCR005C CIR1P42940 261 aa8.01□□□□□ -1.13
CIT2YCR005C BRE2P43132 505 aa8.01□□□□□ -1.13
CIT2YCR005C FMS1P50264 508 aa8.01□□□□□ -1.13
CIT2YCR005C YLR346CQ06139 101 aa8.01□□□□□ -1.13
CIT2YCR005C UBX5Q06682 500 aa8.01□□□□□ -1.13
CIT2YCR005C CFT2Q12102 859 aaPredicted RBP8.01□□□□□ -1.13
CIT2YCR005C APC11Q12157 165 aa8.01□□□□□ -1.13
CIT2YCR005C WTM2Q12206 467 aa8.01□□□□□ -1.13
CIT2YCR005C RKM4Q12504 494 aa8.01□□□□□ -1.13
CIT2YCR005C MYO1P08964 1928 aa8.01□□□□□ -1.13
CIT2YCR005C HVG1P0CE11 249 aa8□□□□□ -1.13
CIT2YCR005C SRO9P25567 434 aaKnown RBP8□□□□□ -1.13
CIT2YCR005C ELM1P32801 640 aa8□□□□□ -1.13
CIT2YCR005C SLX8P40072 274 aa8□□□□□ -1.13
CIT2YCR005C AAD14P42884 376 aa8□□□□□ -1.13
CIT2YCR005C RPS0BP46654 252 aaKnown RBP8□□□□□ -1.13
CIT2YCR005C RET3P53600 189 aa8□□□□□ -1.13
CIT2YCR005C ALD6P54115 500 aaKnown RBP8□□□□□ -1.13
CIT2YCR005C TRS120Q04183 1289 aa8□□□□□ -1.13
CIT2YCR005C RPS6AP0CX37 236 aaKnown RBP7.99□□□□□ -1.13
CIT2YCR005C RPS6BP0CX38 236 aaPredicted RBP7.99□□□□□ -1.13
CIT2YCR005C SAM1P10659 382 aaKnown RBP7.99□□□□□ -1.13
CIT2YCR005C DID4P36108 232 aa7.99□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 37.4 ms