RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C PRI2P20457 528 aa4.45□□□□□ -1.7
SHG1YBR258C KIP1P28742 1111 aa4.45□□□□□ -1.7
SHG1YBR258C MLS1P30952 554 aa4.45□□□□□ -1.7
SHG1YBR258C PIN4P34217 668 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
SHG1YBR258C YKL107WP34251 309 aa4.45□□□□□ -1.7
SHG1YBR258C AKR1P39010 764 aa4.45□□□□□ -1.7
SHG1YBR258C SNF7P39929 240 aaKnown RBP4.45□□□□□ -1.7
SHG1YBR258C MMM1P41800 426 aa4.45□□□□□ -1.7
SHG1YBR258C IOC3P43596 787 aa4.45□□□□□ -1.7
SHG1YBR258C YJL045WP47052 634 aa4.45□□□□□ -1.7
SHG1YBR258C NAN1Q02931 896 aaKnown RBP4.45□□□□□ -1.7
SHG1YBR258C YLR225CQ05948 407 aaKnown RBP4.45□□□□□ -1.7
SHG1YBR258C YOR059CQ08448 450 aaKnown RBP4.45□□□□□ -1.7
SHG1YBR258C MCA1Q08601 432 aa4.45□□□□□ -1.7
SHG1YBR258C YLR122CQ12312 125 aa4.45□□□□□ -1.7
SHG1YBR258C YOL098CQ12496 1037 aa4.45□□□□□ -1.7
SHG1YBR258C TY3B-GQ99315 1547 aa4.45□□□□□ -1.7
SHG1YBR258C SSN2P38931 1420 aa4.45□□□□□ -1.7
SHG1YBR258C SNF5P18480 905 aa4.44□□□□□ -1.7
SHG1YBR258C PUF4P25339 888 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
SHG1YBR258C GRX1P25373 110 aaKnown RBP4.44□□□□□ -1.7
SHG1YBR258C NAM7P30771 971 aaKnown RBP4.44□□□□□ -1.7
SHG1YBR258C ABD1P32783 436 aaPredicted RBP4.44□□□□□ -1.7
SHG1YBR258C MOT2P34909 587 aaKnown RBP4.44□□□□□ -1.7
SHG1YBR258C VBA5P36172 582 aa4.44□□□□□ -1.7
SHG1YBR258C BAP2P38084 609 aa4.44□□□□□ -1.7
SHG1YBR258C MCM7P38132 845 aa4.44□□□□□ -1.7
SHG1YBR258C PNT1P38969 423 aa4.44□□□□□ -1.7
SHG1YBR258C SIP5P40210 489 aaKnown RBP4.44□□□□□ -1.7
SHG1YBR258C CIT3P43635 486 aa4.44□□□□□ -1.7
SHG1YBR258C EAR1Q03212 550 aa4.44□□□□□ -1.7
SHG1YBR258C NSE3Q05541 303 aa4.44□□□□□ -1.7
SHG1YBR258C YVC1Q12324 675 aa4.44□□□□□ -1.7
SHG1YBR258C SPO21Q12411 609 aa4.44□□□□□ -1.7
SHG1YBR258C CHC1P22137 1653 aaKnown RBP4.44□□□□□ -1.7
SHG1YBR258C YER152CP10356 443 aa4.43□□□□□ -1.7
SHG1YBR258C SAM35P14693 329 aa4.43□□□□□ -1.7
SHG1YBR258C STI1P15705 589 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
SHG1YBR258C MSB1P21339 1137 aaKnown RBP4.43□□□□□ -1.7
SHG1YBR258C SRO9P25567 434 aaKnown RBP4.43□□□□□ -1.7
SHG1YBR258C COQ2P32378 372 aa4.43□□□□□ -1.7
SHG1YBR258C YSC84P32793 468 aa4.43□□□□□ -1.7
SHG1YBR258C STE5P32917 917 aa4.43□□□□□ -1.7
SHG1YBR258C IRR1P40541 1150 aa4.43□□□□□ -1.7
SHG1YBR258C OYE3P41816 400 aaPredicted RBP4.43□□□□□ -1.7
SHG1YBR258C TPP1Q03796 238 aa4.43□□□□□ -1.7
SHG1YBR258C FPR4Q06205 392 aaPredicted RBP4.43□□□□□ -1.7
SHG1YBR258C BDF2Q07442 638 aa4.43□□□□□ -1.7
SHG1YBR258C MYO4P32492 1471 aa4.43□□□□□ -1.7
SHG1YBR258C WHI3P34761 661 aaKnown RBP4.42□□□□□ -1.7
SHG1YBR258C PBY1P38254 753 aa4.42□□□□□ -1.7
SHG1YBR258C YGL176CP46945 554 aa4.42□□□□□ -1.7
SHG1YBR258C PFD1P46988 109 aa4.42□□□□□ -1.7
SHG1YBR258C TNA1P53322 534 aa4.42□□□□□ -1.7
SHG1YBR258C MLP2P40457 1679 aa4.41□□□□□ -1.7
SHG1YBR258C CHS2P14180 963 aa4.41□□□□□ -1.7
SHG1YBR258C YHR020WP38708 688 aaKnown RBP4.41□□□□□ -1.7
SHG1YBR258C PEX7P39108 375 aa4.41□□□□□ -1.7
SHG1YBR258C HOS3Q02959 697 aaKnown RBP4.41□□□□□ -1.7
SHG1YBR258C RPN4Q03465 531 aa4.41□□□□□ -1.7
SHG1YBR258C FMP25Q08023 583 aa4.41□□□□□ -1.7
SHG1YBR258C RPL11AP0C0W9 174 aaKnown RBP4.4□□□□□ -1.71
SHG1YBR258C RAD4P14736 754 aa4.4□□□□□ -1.71
SHG1YBR258C MDL2P33311 773 aa4.4□□□□□ -1.71
SHG1YBR258C SLA2P33338 968 aa4.4□□□□□ -1.71
SHG1YBR258C KAE1P36132 386 aa4.4□□□□□ -1.71
SHG1YBR258C YBR184WP38299 523 aa4.4□□□□□ -1.71
SHG1YBR258C YHL012WP38709 493 aa4.4□□□□□ -1.71
SHG1YBR258C PIK1P39104 1066 aa4.4□□□□□ -1.71
SHG1YBR258C GPB2P39717 880 aa4.4□□□□□ -1.71
SHG1YBR258C GUS1P46655 708 aaKnown RBP RIP-Chip data4.4□□□□□ -1.71not detected
SHG1YBR258C RCM1P53972 490 aa4.4□□□□□ -1.71
SHG1YBR258C PPM2Q08282 695 aa4.4□□□□□ -1.71
SHG1YBR258C RPL11BQ3E757 174 aaPredicted RBP4.4□□□□□ -1.71
SHG1YBR258C PDR12Q02785 1511 aa4.4□□□□□ -1.71
SHG1YBR258C NUP157P40064 1391 aaKnown RBP4.4□□□□□ -1.71
SHG1YBR258C COQ4O13525 335 aa4.39□□□□□ -1.71
SHG1YBR258C SBP1P10080 294 aaKnown RBP4.39□□□□□ -1.71
SHG1YBR258C UTP8P53276 713 aaKnown RBP4.39□□□□□ -1.71
SHG1YBR258C SPP382Q06411 708 aaPredicted RBP4.39□□□□□ -1.71
SHG1YBR258C SNQ2P32568 1501 aaKnown RBP4.39□□□□□ -1.71
SHG1YBR258C STU1P38198 1513 aa4.38□□□□□ -1.71
SHG1YBR258C PRP9P19736 530 aaKnown RBP4.38□□□□□ -1.71
SHG1YBR258C DBP2P24783 546 aaKnown RBP4.38□□□□□ -1.71
SHG1YBR258C RPL8BP29453 256 aaKnown RBP4.38□□□□□ -1.71
SHG1YBR258C NMD3P38861 518 aaKnown RBP4.38□□□□□ -1.71
SHG1YBR258C MBP1P39678 833 aa4.38□□□□□ -1.71
SHG1YBR258C GEM1P39722 662 aa4.38□□□□□ -1.71
SHG1YBR258C BUD6P41697 788 aa4.38□□□□□ -1.71
SHG1YBR258C LSB3P43603 459 aaKnown RBP4.38□□□□□ -1.71
SHG1YBR258C HUL5P53119 910 aa4.38□□□□□ -1.71
SHG1YBR258C ORC3P54790 616 aa4.38□□□□□ -1.71
SHG1YBR258C ATG13Q06628 738 aa4.38□□□□□ -1.71
SHG1YBR258C RSC58Q07979 502 aa4.38□□□□□ -1.71
SHG1YBR258C RCL1Q08096 367 aaPredicted RBP4.38□□□□□ -1.71
SHG1YBR258C TRE1Q08919 783 aa4.38□□□□□ -1.71
SHG1YBR258C ACM1Q08981 209 aa4.38□□□□□ -1.71
SHG1YBR258C SMC4Q12267 1418 aa4.38□□□□□ -1.71
SHG1YBR258C CCZ1P38273 704 aa4.37□□□□□ -1.71
SHG1YBR258C SIT1P39980 628 aa4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms