RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W SUL1P38359 859 aa6.72□□□□□ -1.33
SHP1YBL058W STB5P38699 743 aa6.72□□□□□ -1.33
SHP1YBL058W YDR090CQ03193 310 aa6.72□□□□□ -1.33
SHP1YBL058W EST2Q06163 884 aa6.72□□□□□ -1.33
SHP1YBL058W RAD59Q12223 238 aa6.72□□□□□ -1.33
SHP1YBL058W RNR3P21672 869 aaKnown RBP6.71□□□□□ -1.34
SHP1YBL058W PEP3P27801 918 aa6.71□□□□□ -1.34
SHP1YBL058W CLB5P30283 435 aa6.71□□□□□ -1.34
SHP1YBL058W MSS51P32335 436 aa6.71□□□□□ -1.34
SHP1YBL058W BUD2P33314 1104 aa6.71□□□□□ -1.34
SHP1YBL058W UBP11P36026 717 aa6.71□□□□□ -1.34
SHP1YBL058W PSP2P50109 593 aaKnown RBP6.71□□□□□ -1.34
SHP1YBL058W VID30P53076 958 aa6.71□□□□□ -1.34
SHP1YBL058W HUL5P53119 910 aa6.71□□□□□ -1.34
SHP1YBL058W PNG1Q02890 363 aa6.71□□□□□ -1.34
SHP1YBL058W RAD50P12753 1312 aa6.71□□□□□ -1.34
SHP1YBL058W CIT1P00890 479 aa6.7□□□□□ -1.34
SHP1YBL058W TIF1P10081 395 aaKnown RBP6.7□□□□□ -1.34
SHP1YBL058W STI1P15705 589 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
SHP1YBL058W UBC1P21734 215 aaKnown RBP6.7□□□□□ -1.34
SHP1YBL058W DRE2P36152 348 aa6.7□□□□□ -1.34
SHP1YBL058W OPT1P40897 799 aa6.7□□□□□ -1.34
SHP1YBL058W YDR344CQ05510 147 aa6.7□□□□□ -1.34
SHP1YBL058W MAG2Q06436 670 aaKnown RBP6.7□□□□□ -1.34
SHP1YBL058W FAB1P34756 2278 aa6.7□□□□□ -1.34
SHP1YBL058W YLR422WQ06409 1932 aa6.7□□□□□ -1.34
SHP1YBL058W ISW1P38144 1129 aa6.69□□□□□ -1.34
SHP1YBL058W SLX1P38324 304 aa6.69□□□□□ -1.34
SHP1YBL058W BUD16P39988 312 aa6.69□□□□□ -1.34
SHP1YBL058W YEL025CP39991 1188 aa6.69□□□□□ -1.34
SHP1YBL058W ART5P53244 586 aaKnown RBP6.69□□□□□ -1.34
SHP1YBL058W ORC4P54791 529 aa6.69□□□□□ -1.34
SHP1YBL058W SPO71Q03868 1245 aa6.69□□□□□ -1.34
SHP1YBL058W YDR341CQ05506 607 aaKnown RBP6.69□□□□□ -1.34
SHP1YBL058W SVF1Q05515 481 aa6.69□□□□□ -1.34
SHP1YBL058W PRC1P00729 532 aa6.68□□□□□ -1.34
SHP1YBL058W MET6P05694 767 aaKnown RBP6.68□□□□□ -1.34
SHP1YBL058W RPP1BP10622 106 aaKnown RBP6.68□□□□□ -1.34
SHP1YBL058W AKR1P39010 764 aa6.68□□□□□ -1.34
SHP1YBL058W CCT3P39077 534 aaKnown RBP6.68□□□□□ -1.34
SHP1YBL058W YEL023CP39992 682 aa6.68□□□□□ -1.34
SHP1YBL058W FAF1P40546 346 aaPredicted RBP6.68□□□□□ -1.34
SHP1YBL058W PHM6Q05637 104 aa6.68□□□□□ -1.34
SHP1YBL058W CRD1Q07560 283 aa6.68□□□□□ -1.34
SHP1YBL058W ESS1P22696 170 aa6.67□□□□□ -1.34
SHP1YBL058W DID4P36108 232 aa6.67□□□□□ -1.34
SHP1YBL058W BRN1P38170 754 aa6.67□□□□□ -1.34
SHP1YBL058W HUL4P40985 892 aa6.67□□□□□ -1.34
SHP1YBL058W ZPR1P53303 486 aaKnown RBP6.67□□□□□ -1.34
SHP1YBL058W HXT17P53631 564 aa6.67□□□□□ -1.34
SHP1YBL058W MUK1Q02866 612 aa6.67□□□□□ -1.34
SHP1YBL058W GDE1Q02979 1223 aa6.67□□□□□ -1.34
SHP1YBL058W YLR455WQ06188 304 aa6.67□□□□□ -1.34
SHP1YBL058W SRO9P25567 434 aaKnown RBP6.66□□□□□ -1.34
SHP1YBL058W CDC48P25694 835 aaKnown RBP6.66□□□□□ -1.34
SHP1YBL058W SUV3P32580 737 aa6.66□□□□□ -1.34
SHP1YBL058W APN2P38207 520 aa6.66□□□□□ -1.34
SHP1YBL058W SOL3P38858 249 aa6.66□□□□□ -1.34
SHP1YBL058W OYE2Q03558 400 aaKnown RBP6.66□□□□□ -1.34
SHP1YBL058W AIM33Q04516 312 aa6.66□□□□□ -1.34
SHP1YBL058W SMD2Q06217 110 aaKnown RBP6.66□□□□□ -1.34
SHP1YBL058W RLF2Q12495 606 aa6.66□□□□□ -1.34
SHP1YBL058W TOR1P35169 2470 aa6.66□□□□□ -1.34
SHP1YBL058W PGK1P00560 416 aaKnown RBP6.65□□□□□ -1.34
SHP1YBL058W PSE1P32337 1089 aaKnown RBP6.65□□□□□ -1.34
SHP1YBL058W MRPL7P36519 292 aa6.65□□□□□ -1.34
SHP1YBL058W MMF1P40185 145 aaKnown RBP6.65□□□□□ -1.34
SHP1YBL058W ACF4P47129 309 aa6.65□□□□□ -1.34
SHP1YBL058W GCV2P49095 1034 aa6.65□□□□□ -1.34
SHP1YBL058W ECM23Q02710 187 aa6.65□□□□□ -1.34
SHP1YBL058W GIS4Q04233 774 aa6.65□□□□□ -1.34
SHP1YBL058W LCD1Q04377 747 aa6.65□□□□□ -1.34
SHP1YBL058W MBR1P23493 339 aa6.64□□□□□ -1.35
SHP1YBL058W HXT13P39924 564 aa6.64□□□□□ -1.35
SHP1YBL058W VID28P40547 921 aa6.64□□□□□ -1.35
SHP1YBL058W GPD2P41911 440 aaKnown RBP6.64□□□□□ -1.35
SHP1YBL058W YJL045WP47052 634 aa6.64□□□□□ -1.35
SHP1YBL058W CNM67P53865 581 aaKnown RBP6.64□□□□□ -1.35
SHP1YBL058W ILV1P00927 576 aaKnown RBP6.63□□□□□ -1.35
SHP1YBL058W DED1P06634 604 aaKnown RBP6.63□□□□□ -1.35
SHP1YBL058W ADK2P26364 225 aa6.63□□□□□ -1.35
SHP1YBL058W EFT1P32324 842 aaKnown RBP6.63□□□□□ -1.35
SHP1YBL058W SIS2P36024 562 aa6.63□□□□□ -1.35
SHP1YBL058W YAP1801P38856 637 aa6.63□□□□□ -1.35
SHP1YBL058W PCI8P40512 444 aa6.63□□□□□ -1.35
SHP1YBL058W EPL1P43572 832 aa6.63□□□□□ -1.35
SHP1YBL058W CIT3P43635 486 aa6.63□□□□□ -1.35
SHP1YBL058W DIP5P53388 608 aa6.63□□□□□ -1.35
SHP1YBL058W BNI5P53890 448 aaKnown RBP6.63□□□□□ -1.35
SHP1YBL058W HFI1Q12060 488 aa6.63□□□□□ -1.35
SHP1YBL058W HIF1Q12373 385 aa6.63□□□□□ -1.35
SHP1YBL058W CCH1P50077 2039 aa6.62□□□□□ -1.35
SHP1YBL058W AI4P03878 556 aa6.62□□□□□ -1.35
SHP1YBL058W PGM1P33401 570 aaKnown RBP6.62□□□□□ -1.35
SHP1YBL058W RFS1P38234 210 aaKnown RBP6.62□□□□□ -1.35
SHP1YBL058W RXT2P38255 430 aa6.62□□□□□ -1.35
SHP1YBL058W UBX7P38349 436 aa6.62□□□□□ -1.35
SHP1YBL058W ORC6P38826 435 aa6.62□□□□□ -1.35
SHP1YBL058W GAA1P39012 614 aa6.62□□□□□ -1.35
SHP1YBL058W BRE2P43132 505 aa6.62□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 26 ms